CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 182

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B182V182VV6634VsyngtTgtC130712760.97628220164-20166
ORF1ab/nsp15A1-B182V182VV6634VsyngtTgtG1307200.015302220164-20166
ORF1ab/nsp15A1-B182V182VV6634VsyngtTgtA1307110.0084162220164-20166
ORF1ab/nsp15A1-B182V182FV6634FnonsynGttTtt187187120164-20166
ORF1ab/nsp15A1-B182V182IV6634InonsynGttAtt1631620.99386520164-20166
ORF1ab/nsp15A1-B182V182IV6634InonsynGtTAtC16310.0061349720164-20166
ORF1ab/nsp15A1-B182V182delV6634deldelGTT---7777120164-20166
ORF1ab/nsp15A1-B182V182AV6634AnonsyngTtgCt2626120164-20166
ORF1ab/nsp15A1-B182V182GV6634GnonsyngTtgGt1111120164-20166
ORF1ab/nsp15A1-B182V182DV6634DnonsyngTtgAt980.88888920164-20166
ORF1ab/nsp15A1-B182V182DV6634DnonsyngTTgAC910.11111120164-20166
ORF1ab/nsp15A1-B182V182PV6634PnonsynGTTCCA22120164-20166
ORF1ab/nsp15A1-B182V182MV6634MnonsynGtTAtG22120164-20166
ORF1ab/nsp15A1-B182V182NV6634NnonsynGTtAAt210.520164-20166
ORF1ab/nsp15A1-B182V182NV6634NnonsynGTTAAC210.520164-20166
ORF1ab/nsp15A1-B182V182SV6634SnonsynGTtAGt210.520164-20166
ORF1ab/nsp15A1-B182V182LV6634LnonsynGttCtt210.520164-20166
ORF1ab/nsp15A1-B182V182LV6634LnonsynGtTTtG210.520164-20166
ORF1ab/nsp15A1-B182V182SV6634SnonsynGTTTCC210.520164-20166
ORF1ab/nsp15A1-B182V182TV6634TnonsynGTTACA11120164-20166
ORF1ab/nsp15A1-B182V182XV6634XnonsynGTTTGA11120164-20166
ORF1ab/nsp15A1-B182V182CV6634CnonsynGTtTGt11120164-20166
ORF1ab/nsp15A1-B182V182WV6634WnonsynGTTTGG11120164-20166

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B182V182VgtTgtC12761307All0.000244
ORF1ab/nsp15A1-B182V182VgtTgtG201307All0.000004
ORF1ab/nsp15A1-B182V182VgtTgtA111307All0.000002
ORF1ab/nsp15A1-B182V182VgtTgtC11141114AY.30.01108
ORF1ab/nsp15A1-B182V182FGttTtt187187All0.000036
ORF1ab/nsp15A1-B182V182IGttAtt162163All0.000031
ORF1ab/nsp15A1-B182V182IGtTAtC1163All0
ORF1ab/nsp15A1-B182V182VgtTgtC9193B.1.1.70.000081
ORF1ab/nsp15A1-B182V182VgtTgtA193B.1.1.70.000001
ORF1ab/nsp15A1-B182V182VgtTgtG193B.1.1.70.000001
ORF1ab/nsp15A1-B182V182delGTT---7777All0.000015
ORF1ab/nsp15A1-B182V182IGttAtt5959B.1.1.3750.702381
ORF1ab/nsp15A1-B182V182FGttTtt3434B.1.617.20.000128
ORF1ab/nsp15A1-B182V182AgTtgCt2626All0.000005
ORF1ab/nsp15A1-B182V182IGttAtt2626B.1.1.70.000023
ORF1ab/nsp15A1-B182V182FGttTtt2222B.1.20.000194
ORF1ab/nsp15A1-B182V182delGTT---1414B.1.1.70.000013
ORF1ab/nsp15A1-B182V182VgtTgtG1313B.1.4290.000306
ORF1ab/nsp15A1-B182V182VgtTgtC1313B.1.617.20.000049
ORF1ab/nsp15A1-B182V182FGttTtt1212AY.430.000053
ORF1ab/nsp15A1-B182V182FGttTtt1212B.1.1.70.000011
ORF1ab/nsp15A1-B182V182GgTtgGt1111All0.000002
ORF1ab/nsp15A1-B182V182IGttAtt1111AY.290.000174
ORF1ab/nsp15A1-B182V182delGTT---1111B.1.20.000097
ORF1ab/nsp15A1-B182V182IGttAtt1111P.10.000173
ORF1ab/nsp15A1-B182V182DgTtgAt89All0.000002
ORF1ab/nsp15A1-B182V182DgTTgAC19All0
ORF1ab/nsp15A1-B182V182FGttTtt99AY.440.000055
ORF1ab/nsp15A1-B182V182FGttTtt99B.1.3500.026393
ORF1ab/nsp15A1-B182V182AgTtgCt88B.1.6370.000585
ORF1ab/nsp15A1-B182V182VgtTgtC77AY.1020.000186
ORF1ab/nsp15A1-B182V182FGttTtt77AY.1030.000043
ORF1ab/nsp15A1-B182V182IGttAtt77AY.40.000011
ORF1ab/nsp15A1-B182V182VgtTgtC67AY.46.60.000433
ORF1ab/nsp15A1-B182V182VgtTgtG17AY.46.60.000072
ORF1ab/nsp15A1-B182V182delGTT---77B.1.617.20.000026
ORF1ab/nsp15A1-B182V182delGTT---660.333333
ORF1ab/nsp15A1-B182V182VgtTgtC66AY.1030.000037
ORF1ab/nsp15A1-B182V182FGttTtt66AY.1150.03125
ORF1ab/nsp15A1-B182V182FGttTtt66AY.40.000009
ORF1ab/nsp15A1-B182V182FGttTtt55AY.1160.001434
ORF1ab/nsp15A1-B182V182VgtTgtC55AY.1170.000423
ORF1ab/nsp15A1-B182V182FGttTtt55P.10.000079
ORF1ab/nsp15A1-B182V182VgtTgtC44AY.250.000024
ORF1ab/nsp15A1-B182V182VgtTgtA44AY.40.000006
ORF1ab/nsp15A1-B182V182delGTT---44AY.430.000018
ORF1ab/nsp15A1-B182V182delGTT---44AY.440.000024
ORF1ab/nsp15A1-B182V182VgtTgtC34B.1.10.000054
ORF1ab/nsp15A1-B182V182VgtTgtA14B.1.10.000018
ORF1ab/nsp15A1-B182V182FGttTtt44B.1.1770.000053
ORF1ab/nsp15A1-B182V182IGttAtt44B.1.20.000035
ORF1ab/nsp15A1-B182V182FGttTtt44B.1.2340.000528
ORF1ab/nsp15A1-B182V182IGttAtt44B.1.617.20.000015
ORF1ab/nsp15A1-B182V182IGttAtt33AY.1200.000112
ORF1ab/nsp15A1-B182V182IGttAtt33AY.250.000018
ORF1ab/nsp15A1-B182V182FGttTtt33AY.340.000291
ORF1ab/nsp15A1-B182V182IGttAtt33AY.4.20.000065
ORF1ab/nsp15A1-B182V182IGttAtt33AY.910.002191
ORF1ab/nsp15A1-B182V182FGttTtt33B.10.000027
ORF1ab/nsp15A1-B182V182AgTtgCt33B.1.1.70.000003
ORF1ab/nsp15A1-B182V182delGTT---33B.1.5260.000071
ORF1ab/nsp15A1-B182V182MGtTAtG22All0
ORF1ab/nsp15A1-B182V182PGTTCCA22All0
ORF1ab/nsp15A1-B182V182SGTTTCC12All0
ORF1ab/nsp15A1-B182V182LGtTTtG12All0
ORF1ab/nsp15A1-B182V182NGTTAAC12All0
ORF1ab/nsp15A1-B182V182LGttCtt12All0
ORF1ab/nsp15A1-B182V182SGTtAGt12All0
ORF1ab/nsp15A1-B182V182NGTtAAt12All0
ORF1ab/nsp15A1-B182V182FGttTtt22AY.20.000712
ORF1ab/nsp15A1-B182V182FGttTtt22AY.30.00002
ORF1ab/nsp15A1-B182V182delGTT---22AY.40.000003
ORF1ab/nsp15A1-B182V182FGttTtt22AY.4.50.000215
ORF1ab/nsp15A1-B182V182VgtTgtA22AY.420.00008
ORF1ab/nsp15A1-B182V182GgTtgGt22AY.430.000009
ORF1ab/nsp15A1-B182V182VgtTgtC12AY.430.000004
ORF1ab/nsp15A1-B182V182VgtTgtG12AY.430.000004
ORF1ab/nsp15A1-B182V182FGttTtt22AY.450.000243
ORF1ab/nsp15A1-B182V182IGttAtt22AY.46.60.000144
ORF1ab/nsp15A1-B182V182VgtTgtC22AY.840.000875
ORF1ab/nsp15A1-B182V182IGttAtt22AY.850.000854
ORF1ab/nsp15A1-B182V182delGTT---22AY.9.20.000073
ORF1ab/nsp15A1-B182V182IGttAtt22B.10.000018
ORF1ab/nsp15A1-B182V182GgTtgGt22B.10.000018
ORF1ab/nsp15A1-B182V182delGTT---22B.1.10.000036
ORF1ab/nsp15A1-B182V182FGttTtt22B.1.10.000036
ORF1ab/nsp15A1-B182V182DgTtgAt12B.1.10.000018
ORF1ab/nsp15A1-B182V182DgTTgAC12B.1.10.000018
ORF1ab/nsp15A1-B182V182IGtTAtC12B.1.10.000018
ORF1ab/nsp15A1-B182V182NGTTAAC12B.1.10.000018
ORF1ab/nsp15A1-B182V182IGttAtt12B.1.10.000018
ORF1ab/nsp15A1-B182V182NGTtAAt12B.1.10.000018
ORF1ab/nsp15A1-B182V182VgtTgtG22B.1.1.330.000842
ORF1ab/nsp15A1-B182V182PGTTCCA22B.1.1.70.000002
ORF1ab/nsp15A1-B182V182FGttTtt22B.1.1600.000062
ORF1ab/nsp15A1-B182V182VgtTgtC22B.1.1770.000026
ORF1ab/nsp15A1-B182V182delGTT---22B.1.2580.000133
ORF1ab/nsp15A1-B182V182VgtTgtC22B.1.2580.000133
ORF1ab/nsp15A1-B182V182FGttTtt22B.1.3510.000059
ORF1ab/nsp15A1-B182V182FGttTtt22B.1.360.000292
ORF1ab/nsp15A1-B182V182AgTtgCt22B.1.3670.001585
ORF1ab/nsp15A1-B182V182FGttTtt22C.390.037736
ORF1ab/nsp15A1-B182V182AgTtgCt22D.20.00015
ORF1ab/nsp15A1-B182V182FGttTtt11A0.000387
ORF1ab/nsp15A1-B182V182VgtTgtC11A0.000387
ORF1ab/nsp15A1-B182V182delGTT---11A.2.40.003367
ORF1ab/nsp15A1-B182V182FGttTtt11A.270.001656
ORF1ab/nsp15A1-B182V182FGttTtt11AE.80.000489
ORF1ab/nsp15A1-B182V182WGTTTGG11All0
ORF1ab/nsp15A1-B182V182TGTTACA11All0
ORF1ab/nsp15A1-B182V182CGTtTGt11All0
ORF1ab/nsp15A1-B182V182XGTTTGA11All0
ORF1ab/nsp15A1-B182V182IGttAtt11AY.1000.000046
ORF1ab/nsp15A1-B182V182FGttTtt11AY.1020.000027
ORF1ab/nsp15A1-B182V182IGttAtt11AY.1020.000027
ORF1ab/nsp15A1-B182V182DgTtgAt11AY.1020.000027
ORF1ab/nsp15A1-B182V182IGttAtt11AY.1030.000006
ORF1ab/nsp15A1-B182V182FGttTtt11AY.1060.000335
ORF1ab/nsp15A1-B182V182delGTT---11AY.1070.000466
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.1100.000113
ORF1ab/nsp15A1-B182V182delGTT---11AY.1130.000142
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.1140.000231
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.1160.000287
ORF1ab/nsp15A1-B182V182FGttTtt11AY.1170.000085
ORF1ab/nsp15A1-B182V182FGttTtt11AY.1180.000063
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.1180.000063
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.1190.000035
ORF1ab/nsp15A1-B182V182delGTT---11AY.1200.000037
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.120.10.000321
ORF1ab/nsp15A1-B182V182FGttTtt11AY.160.00038
ORF1ab/nsp15A1-B182V182FGttTtt11AY.200.000039
ORF1ab/nsp15A1-B182V182IGttAtt11AY.230.00007
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.230.00007
ORF1ab/nsp15A1-B182V182delGTT---11AY.250.000006
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.260.000028
ORF1ab/nsp15A1-B182V182FGttTtt11AY.260.000028
ORF1ab/nsp15A1-B182V182VgtTgtG11AY.290.000016
ORF1ab/nsp15A1-B182V182delGTT---11AY.30.00001
ORF1ab/nsp15A1-B182V182FGttTtt11AY.320.000532
ORF1ab/nsp15A1-B182V182FGttTtt11AY.330.000067
ORF1ab/nsp15A1-B182V182IGttAtt11AY.370.000316
ORF1ab/nsp15A1-B182V182IGttAtt11AY.390.000025
ORF1ab/nsp15A1-B182V182FGttTtt11AY.390.000025
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.39.10.00004
ORF1ab/nsp15A1-B182V182DgTtgAt11AY.430.000004
ORF1ab/nsp15A1-B182V182AgTtgCt11AY.430.000004
ORF1ab/nsp15A1-B182V182IGttAtt11AY.440.000006
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.440.000006
ORF1ab/nsp15A1-B182V182AgTtgCt11AY.440.000006
ORF1ab/nsp15A1-B182V182MGtTAtG11AY.46.60.000072
ORF1ab/nsp15A1-B182V182AgTtgCt11AY.470.000031
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.50.000021
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.590.00053
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.60.000041
ORF1ab/nsp15A1-B182V182FGttTtt11AY.60.000041
ORF1ab/nsp15A1-B182V182FGttTtt11AY.600.000938
ORF1ab/nsp15A1-B182V182delGTT---11AY.670.000464
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.820.001357
ORF1ab/nsp15A1-B182V182LGtTTtG11AY.840.000437
ORF1ab/nsp15A1-B182V182WGTTTGG11AY.840.000437
ORF1ab/nsp15A1-B182V182delGTT---11AY.850.000427
ORF1ab/nsp15A1-B182V182GgTtgGt11AY.850.000427
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.9.10.000084
ORF1ab/nsp15A1-B182V182VgtTgtC11AY.9.20.000037
ORF1ab/nsp15A1-B182V182FGttTtt11AY.9.20.000037
ORF1ab/nsp15A1-B182V182IGttAtt11AY.9.20.000037
ORF1ab/nsp15A1-B182V182delGTT---11AY.990.001049
ORF1ab/nsp15A1-B182V182IGttAtt11B0.000128
ORF1ab/nsp15A1-B182V182VgtTgtC11B0.000128
ORF1ab/nsp15A1-B182V182delGTT---11B.10.000009
ORF1ab/nsp15A1-B182V182AgTtgCt11B.10.000009
ORF1ab/nsp15A1-B182V182DgTtgAt11B.10.000009
ORF1ab/nsp15A1-B182V182AgTtgCt11B.1.10.000018
ORF1ab/nsp15A1-B182V182DgTtgAt11B.1.1.10.000327
ORF1ab/nsp15A1-B182V182delGTT---11B.1.1.2070.001182
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.1.2070.001182
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.1.250.000569
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.1.2580.003257
ORF1ab/nsp15A1-B182V182VgtTgtC11B.1.1.3060.000438
ORF1ab/nsp15A1-B182V182VgtTgtA11B.1.1.3070.002532
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.1.3260.001761
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.1.3290.003846
ORF1ab/nsp15A1-B182V182GgTtgGt11B.1.1.3980.003226
ORF1ab/nsp15A1-B182V182GgTtgGt11B.1.1.4090.002833
ORF1ab/nsp15A1-B182V182VgtTgtG11B.1.1.5190.00004
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.1.5190.00004
ORF1ab/nsp15A1-B182V182AgTtgCt11B.1.1.5190.00004
ORF1ab/nsp15A1-B182V182SGTTTCC11B.1.1.70.000001
ORF1ab/nsp15A1-B182V182GgTtgGt11B.1.1.70.000001
ORF1ab/nsp15A1-B182V182XGTTTGA11B.1.1.70.000001
ORF1ab/nsp15A1-B182V182TGTTACA11B.1.1.70.000001
ORF1ab/nsp15A1-B182V182SGTtAGt11B.1.1.700.000341
ORF1ab/nsp15A1-B182V182delGTT---11B.1.1.700.000341
ORF1ab/nsp15A1-B182V182GgTtgGt11B.1.1.700.000341
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.1.700.000341
ORF1ab/nsp15A1-B182V182DgTtgAt11B.1.160.100.008065
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.177.230.003236
ORF1ab/nsp15A1-B182V182delGTT---11B.1.177.730.000566
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.177.860.000183
ORF1ab/nsp15A1-B182V182VgtTgtA11B.1.20.000009
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.2430.00007
ORF1ab/nsp15A1-B182V182VgtTgtC11B.1.3110.000275
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.3110.000275
ORF1ab/nsp15A1-B182V182GgTtgGt11B.1.3320.003497
ORF1ab/nsp15A1-B182V182VgtTgtA11B.1.3510.00003
ORF1ab/nsp15A1-B182V182LGttCtt11B.1.3510.00003
ORF1ab/nsp15A1-B182V182MGtTAtG11B.1.360.000146
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.36.80.001
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.4000.000429
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.4000.000429
ORF1ab/nsp15A1-B182V182delGTT---11B.1.416.10.001563
ORF1ab/nsp15A1-B182V182delGTT---11B.1.4270.00005
ORF1ab/nsp15A1-B182V182delGTT---11B.1.4290.000024
ORF1ab/nsp15A1-B182V182GgTtgGt11B.1.4290.000024
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.4530.003236
ORF1ab/nsp15A1-B182V182AgTtgCt11B.1.466.20.000391
ORF1ab/nsp15A1-B182V182DgTtgAt11B.1.4970.000315
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.4990.00105
ORF1ab/nsp15A1-B182V182AgTtgCt11B.1.5090.000866
ORF1ab/nsp15A1-B182V182delGTT---11B.1.5240.001406
ORF1ab/nsp15A1-B182V182IGttAtt11B.1.5760.000907
ORF1ab/nsp15A1-B182V182delGTT---11B.1.5850.027778
ORF1ab/nsp15A1-B182V182AgTtgCt11B.1.5950.000261
ORF1ab/nsp15A1-B182V182delGTT---11B.1.5960.000087
ORF1ab/nsp15A1-B182V182AgTtgCt11B.1.617.20.000004
ORF1ab/nsp15A1-B182V182DgTtgAt11B.1.617.20.000004
ORF1ab/nsp15A1-B182V182delGTT---11B.1.6200.000946
ORF1ab/nsp15A1-B182V182FGttTtt11B.1.80.001972
ORF1ab/nsp15A1-B182V182IGttAtt11B.290.003509
ORF1ab/nsp15A1-B182V182IGttAtt11B.400.000364
ORF1ab/nsp15A1-B182V182FGttTtt11C.370.000116
ORF1ab/nsp15A1-B182V182IGttAtt11D.20.000075
ORF1ab/nsp15A1-B182V182CGTtTGt11P.10.000016
ORF1ab/nsp15A1-B182V182FGttTtt11P.1.140.000048
ORF1ab/nsp15A1-B182V182IGttAtt11Q.80.000165
ORF1ab/nsp15A1-B182V182AgTtgCt11R.10.00009