CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 171 | A171V | A6623V | nonsyn | gCc | gTc | 8302 | 8291 | 0.998675 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171V | A6623V | nonsyn | gCC | gTT | 8302 | 7 | 0.00084317 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171V | A6623V | nonsyn | gCC | gTG | 8302 | 3 | 0.000361359 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171V | A6623V | nonsyn | gCC | gTA | 8302 | 1 | 0.000120453 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171A | A6623A | syn | gcC | gcT | 5197 | 5104 | 0.982105 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171A | A6623A | syn | gcC | gcA | 5197 | 93 | 0.0178949 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171S | A6623S | nonsyn | Gcc | Tcc | 3091 | 3090 | 0.999676 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171S | A6623S | nonsyn | GCc | AGc | 3091 | 1 | 0.00032352 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171T | A6623T | nonsyn | Gcc | Acc | 538 | 534 | 0.992565 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171T | A6623T | nonsyn | GcC | AcA | 538 | 4 | 0.00743494 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171del | A6623del | del | GCC | --- | 90 | 90 | 1 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171D | A6623D | nonsyn | gCc | gAc | 67 | 63 | 0.940298 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171D | A6623D | nonsyn | gCC | gAT | 67 | 4 | 0.0597015 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171P | A6623P | nonsyn | Gcc | Ccc | 22 | 19 | 0.863636 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171P | A6623P | nonsyn | GcC | CcT | 22 | 3 | 0.136364 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171G | A6623G | nonsyn | gCc | gGc | 5 | 5 | 1 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171F | A6623F | nonsyn | GCc | TTc | 4 | 4 | 1 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171del1 | A6623del1 | del | gCc | g-c | 3 | 2 | 0.666667 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171del1 | A6623del1 | del | GCC | -NN | 3 | 1 | 0.333333 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171E | A6623E | nonsyn | gCC | gAG | 2 | 2 | 1 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171I | A6623I | nonsyn | GCc | ATc | 1 | 1 | 1 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171del2 | A6623del2 | del | GCc | --c | 1 | 1 | 1 | 20131-20133 |
ORF1ab/nsp15A1-B | 171 | A171L | A6623L | nonsyn | GCC | CTA | 1 | 1 | 1 | 20131-20133 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 8291 | 8302 | All | 0.001586 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTT | 7 | 8302 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTG | 3 | 8302 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTA | 1 | 8302 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5104 | 5197 | All | 0.000976 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 93 | 5197 | All | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 3090 | 3091 | All | 0.000591 |
ORF1ab/nsp15A1-B | 171 | A171S | GCc | AGc | 1 | 3091 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2671 | 2671 | AY.44 | 0.016258 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2446 | 2448 | AY.4 | 0.003807 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTT | 2 | 2448 | AY.4 | 0.000003 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1337 | 1337 | B.1.1.7 | 0.001197 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1077 | 1087 | B.1.1.7 | 0.000964 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 10 | 1087 | B.1.1.7 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 755 | 756 | B.1.2 | 0.006648 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTT | 1 | 756 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 534 | 538 | All | 0.000102 |
ORF1ab/nsp15A1-B | 171 | A171T | GcC | AcA | 4 | 538 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 467 | 469 | B.1.617.2 | 0.001758 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 2 | 469 | B.1.617.2 | 0.000008 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 449 | 458 | AY.4 | 0.000699 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 9 | 458 | AY.4 | 0.000014 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 398 | 398 | AY.103 | 0.002471 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 378 | 379 | B.1.617.2 | 0.001423 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTG | 1 | 379 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 377 | 378 | AY.43 | 0.00167 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 378 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 314 | 315 | AY.44 | 0.001911 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTT | 1 | 315 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 305 | 305 | B.1.429 | 0.007176 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 275 | 275 | B.1.2 | 0.002421 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 201 | 201 | AY.39 | 0.004967 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 182 | 182 | B.1.526 | 0.004278 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 144 | 144 | AY.4 | 0.000224 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 131 | 131 | AY.4 | 0.000204 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 130 | 130 | B.1.177 | 0.001712 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 125 | 125 | AY.25 | 0.000752 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 118 | 118 | AY.103 | 0.000733 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 110 | 113 | AY.44 | 0.00067 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 3 | 113 | AY.44 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 112 | 112 | B.1 | 0.001026 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 109 | 110 | B.1.1.28 | 0.033925 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTT | 1 | 110 | B.1.1.28 | 0.000311 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 110 | 110 | P.1.17 | 0.017794 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 108 | 108 | B.1.1.227 | 0.469565 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 104 | 104 | B.1.160 | 0.003244 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 95 | 95 | B.1.351 | 0.002824 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 90 | 90 | All | 0.000017 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 87 | 87 | AY.43 | 0.000385 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 82 | 83 | AY.25 | 0.000493 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 83 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 81 | 82 | B.1.1.7 | 0.000073 |
ORF1ab/nsp15A1-B | 171 | A171T | GcC | AcA | 1 | 82 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 79 | 79 | AY.4.2 | 0.001713 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 72 | 72 | AY.26 | 0.002038 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 71 | 71 | AY.102 | 0.001882 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 63 | 67 | All | 0.000012 |
ORF1ab/nsp15A1-B | 171 | A171D | gCC | gAT | 4 | 67 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 64 | 64 | B.1.1.170 | 0.0798 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 64 | 64 | B.1.617.2 | 0.000241 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 62 | 62 | AY.36 | 0.009189 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 52 | 56 | B.1 | 0.000476 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 4 | 56 | B.1 | 0.000037 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 56 | 56 | P.1 | 0.000882 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 54 | 54 | B.1.177.57 | 0.015173 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 54 | 54 | B.1.429 | 0.001271 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 52 | 52 | AY.3 | 0.000517 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 51 | 51 | AY.103 | 0.000317 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 50 | 50 | AY.75 | 0.002801 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 49 | 49 | AY.118 | 0.00307 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 41 | 48 | AY.33 | 0.002738 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 7 | 48 | AY.33 | 0.000467 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 48 | 48 | B.1.160 | 0.001497 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 48 | 48 | B.1.604 | 0.827586 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 47 | 47 | B.1.427 | 0.002373 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 43 | 44 | AY.102 | 0.00114 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 44 | AY.102 | 0.000027 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 44 | 44 | AY.75.1 | 0.007934 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 41 | 41 | AY.14 | 0.003609 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 39 | 39 | P.1 | 0.000614 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 38 | 38 | B.1.147 | 0.028723 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 38 | 38 | P.1.16 | 0.014216 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 36 | 37 | B.1.177 | 0.000474 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 37 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 36 | 36 | B.1.1 | 0.000653 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 36 | 36 | B.1.478 | 0.423529 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 34 | 34 | AY.39 | 0.00084 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 34 | 34 | B.1.509 | 0.029437 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 33 | 33 | P.2 | 0.006159 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 32 | 32 | B.1.1.519 | 0.001271 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 31 | 31 | AY.3 | 0.000308 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 31 | 31 | B.1.177.86 | 0.005687 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 30 | 30 | AP.1 | 0.045045 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 28 | 29 | AY.42 | 0.001126 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 29 | AY.42 | 0.00004 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 28 | 28 | B.1.369 | 0.007986 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 27 | 27 | AY.29 | 0.000426 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 27 | 27 | AY.46.5 | 0.005357 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 16 | 26 | AY.75 | 0.000896 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 10 | 26 | AY.75 | 0.00056 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 26 | 26 | AY.9.2 | 0.000955 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 25 | 25 | B.1.1.7 | 0.000022 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 24 | 24 | B.1.258 | 0.001597 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 23 | 23 | B.1.177.56 | 0.015354 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 19 | 22 | All | 0.000004 |
ORF1ab/nsp15A1-B | 171 | A171P | GcC | CcT | 3 | 22 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 22 | 22 | AY.20 | 0.000855 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 22 | 22 | B.1.351 | 0.000654 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 21 | 21 | AY.6 | 0.000864 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 20 | 21 | B.1.1 | 0.000363 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 21 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 21 | 21 | B.1.1.309 | 0.122807 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 21 | 21 | B.1.243 | 0.001461 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 20 | 20 | P.1.14 | 0.000956 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 19 | 19 | AY.117 | 0.001606 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 19 | 19 | B.1.1.27 | 0.107345 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 19 | 19 | B.1.221 | 0.00135 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 19 | 19 | B.1.596 | 0.001656 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 18 | 18 | AY.12 | 0.005689 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 18 | 18 | B.1.526 | 0.000423 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 18 | 18 | B.1.617.2 | 0.000068 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 17 | 17 | AY.46 | 0.001769 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 17 | 17 | AY.9.2 | 0.000624 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 17 | 17 | B.1.1.7 | 0.000015 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 17 | 17 | B.1.243 | 0.001183 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 16 | 16 | AY.120 | 0.000595 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 16 | 16 | AY.5 | 0.00033 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 16 | 16 | AY.86 | 0.013278 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 16 | 16 | B.1.177.21 | 0.001224 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 16 | 16 | B.1.36 | 0.002334 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 16 | 16 | P.1.14 | 0.000765 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 15 | 15 | A.2.5 | 0.007485 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 15 | 15 | AY.20 | 0.000583 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 15 | 15 | AY.75.1 | 0.002705 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 15 | 15 | B.1.1.33 | 0.006313 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 15 | 15 | B.1.126 | 0.019133 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 15 | 15 | B.1.177.81 | 0.00284 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 14 | 14 | AY.106 | 0.004689 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 14 | 14 | AY.119 | 0.000494 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 14 | 14 | AY.45 | 0.001704 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 14 | 14 | B.1.1.7 | 0.000013 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 14 | 14 | B.1.427 | 0.000707 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 13 | 13 | AY.100 | 0.000598 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 13 | 13 | AY.102 | 0.000345 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 13 | 13 | AY.23 | 0.000907 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 13 | 13 | AY.29 | 0.000205 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 13 | 13 | B.1.1.402 | 0.144444 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 13 | 13 | B.1.561 | 0.005161 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 12 | 12 | AD.2 | 0.002628 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 12 | 12 | AY.5 | 0.000248 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 12 | 12 | B.1 | 0.00011 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 12 | 12 | B.1.1.487 | 0.067039 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 12 | 12 | B.1.400 | 0.005148 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 12 | 12 | B.1.474 | 0.022814 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 11 | 11 | AY.121 | 0.001488 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 11 | 11 | AY.35 | 0.002564 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 11 | 11 | B.1.2 | 0.000097 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 10 | 10 | AY.113 | 0.001424 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 10 | 10 | AY.3 | 0.000099 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 10 | 10 | B.1.1.1 | 0.003267 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 10 | 10 | B.1.1.207 | 0.01182 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 10 | 10 | B.1.218 | 0.051546 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 10 | 10 | B.1.438.1 | 0.001073 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 10 | 10 | C.37 | 0.001161 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 9 | 9 | AY.10 | 0.004769 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 9 | 9 | AY.116 | 0.002581 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 9 | 9 | AY.3.1 | 0.000767 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 9 | 9 | AY.4.2.1 | 0.001341 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 9 | 9 | AY.46 | 0.000937 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 9 | 9 | AY.9.1 | 0.000754 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 9 | 9 | B.1.1 | 0.000163 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 9 | 9 | B.1.1.33 | 0.003788 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 9 | 9 | B.1.36.8 | 0.009 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 9 | 9 | B.1.637 | 0.000658 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 8 | 8 | AY.101 | 0.003923 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 8 | 8 | AY.103 | 0.00005 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 8 | 8 | AY.108 | 0.00882 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 8 | 8 | AY.119 | 0.000282 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 7 | 8 | AY.23 | 0.000488 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 8 | AY.23 | 0.00007 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 8 | 8 | AY.6 | 0.000329 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 8 | 8 | B.1.1.50 | 0.005431 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 8 | 8 | B.1.177.73 | 0.00453 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 8 | 8 | B.1.36.29 | 0.004139 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 8 | 8 | B.1.400.1 | 0.121212 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 8 | 8 | B.4 | 0.01766 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 8 | 8 | Q.1 | 0.001011 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 7 | 7 | AY.25 | 0.000042 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 7 | 7 | AY.26 | 0.000198 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | AY.29.1 | 0.001544 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 7 | 7 | AY.34 | 0.000679 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 7 | 7 | AY.34.1 | 0.00357 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | AY.39.1 | 0.000277 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | AY.42 | 0.000282 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 7 | 7 | AY.43 | 0.000031 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 7 | 7 | AY.61 | 0.000733 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | AY.98 | 0.000553 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | AY.98.1 | 0.000339 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 7 | 7 | B.1.1.189 | 0.01059 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 7 | 7 | B.1.177.7 | 0.001154 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | B.1.234 | 0.000924 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 7 | 7 | B.1.311 | 0.001922 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 7 | 7 | C.37 | 0.000812 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | AY.100 | 0.000276 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | AY.116 | 0.001721 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 6 | 6 | AY.120 | 0.000223 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 6 | 6 | AY.46.6 | 0.000433 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | AY.7.1 | 0.000676 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 6 | 6 | B.1.177.62 | 0.007151 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | B.1.177.77 | 0.004357 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | B.1.234 | 0.000792 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | B.1.627 | 0.012121 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 6 | 6 | C.26 | 0.044118 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 6 | 6 | R.1 | 0.00054 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | A.5 | 0.009615 |
ORF1ab/nsp15A1-B | 171 | A171G | gCc | gGc | 5 | 5 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | AY.16.1 | 0.00235 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 5 | 5 | AY.27 | 0.000324 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | AY.53 | 0.001438 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | AY.59 | 0.002648 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | AY.9 | 0.000338 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | B.1.1.518 | 0.031646 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | B.1.177.44 | 0.002595 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 5 | 5 | B.1.221 | 0.000355 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | B.1.258.17 | 0.00052 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 5 | 5 | B.1.356 | 0.008636 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | B.1.36.7 | 0.02 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | B.1.468 | 0.028571 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | B.1.523 | 0.012255 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | B.1.541 | 0.022124 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | B.1.575 | 0.001517 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 5 | 5 | D.2 | 0.000375 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | D.2 | 0.000375 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 5 | 5 | Q.3 | 0.000725 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTT | 2 | 4 | 0.111111 | |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTG | 2 | 4 | 0.111111 | |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | A | 0.001548 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | A.1 | 0.001127 |
ORF1ab/nsp15A1-B | 171 | A171F | GCc | TTc | 4 | 4 | All | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | AY.1 | 0.001583 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | AY.117 | 0.000338 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | AY.14 | 0.000352 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | AY.24 | 0.001724 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 3 | 4 | AY.44 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171T | GcC | AcA | 1 | 4 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | AY.51 | 0.003636 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | AY.61 | 0.000419 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | AY.62 | 0.001743 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 4 | 4 | AY.73 | 0.002661 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | B.1.1.189 | 0.006051 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | B.1.1.389 | 0.024242 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | B.1.1.416 | 0.00362 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | B.1.1.70 | 0.001364 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | B.1.177.21 | 0.000306 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | B.1.177.87 | 0.002911 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | B.1.311 | 0.001098 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 4 | 4 | B.1.526 | 0.000094 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | B.1.568 | 0.004444 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | B.1.621.1 | 0.002023 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | P.2 | 0.000747 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | A.25 | 0.054545 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | A.29 | 0.015957 |
ORF1ab/nsp15A1-B | 171 | A171del1 | gCc | g-c | 2 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171del1 | GCC | -NN | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | AY.109 | 0.002219 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | AY.53 | 0.000863 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.85 | 0.001282 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | AY.88 | 0.002653 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | B.1.1.25 | 0.001706 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | B.1.1.294 | 0.003797 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | B.1.1.317 | 0.001235 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 3 | B.1.177.7 | 0.00033 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 3 | B.1.177.7 | 0.000165 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | B.1.236 | 0.00616 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | B.1.497 | 0.000944 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 3 | 3 | B.1.503 | 0.007463 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | B.1.577 | 0.002062 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | C.16 | 0.003181 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp15A1-B | 171 | A171P | GcC | CcT | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 171 | A171E | gCC | gAG | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 171 | A171D | gCC | gAT | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | A.19 | 0.018868 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp15A1-B | 171 | A171E | gCC | gAG | 2 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AU.2 | 0.004843 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171D | gCC | gAT | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.5.1 | 0.007519 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.64 | 0.00119 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.82 | 0.002714 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171T | GcC | AcA | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.138 | 0.012121 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.196 | 0.011429 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.225 | 0.014388 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.316 | 0.00185 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.344 | 0.021505 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.351 | 0.005587 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.419 | 0.014815 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.1.8 | 0.007168 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.1.89 | 0.012121 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.128 | 0.001271 |
ORF1ab/nsp15A1-B | 171 | A171S | GCc | AGc | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.177.9 | 0.002663 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.189 | 0.008584 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.22 | 0.002635 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.23 | 0.012121 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp15A1-B | 171 | A171V | gCC | gTA | 1 | 2 | B.1.349 | 0.000715 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 2 | B.1.349 | 0.000715 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.36.10 | 0.009569 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.377 | 0.009132 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.398 | 0.005952 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.499 | 0.002101 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.551 | 0.002581 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.570 | 0.005882 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.575.1 | 0.004878 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | B.1.617.3 | 0.00597 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.1.97 | 0.051282 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | C.9 | 0.060606 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | P.1.16 | 0.000748 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | A.28 | 0.002646 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | A.30 | 0.142857 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AE.3 | 0.032258 |
ORF1ab/nsp15A1-B | 171 | A171L | GCC | CTA | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171del2 | GCc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171I | GCc | ATc | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | AV.1 | 0.005051 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp15A1-B | 171 | A171G | gCc | gGc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp15A1-B | 171 | A171F | GCc | TTc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171F | GCc | TTc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.83 | 0.001724 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp15A1-B | 171 | A171I | GCc | ATc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B | 0.000128 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171F | GCc | TTc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171del1 | gCc | g-c | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171P | GcC | CcT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp15A1-B | 171 | A171G | gCc | gGc | 1 | 1 | B.1.1.193 | 0.111111 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | B.1.1.193 | 0.111111 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.227 | 0.004348 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.374 | 0.002375 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.1.440 | 0.011765 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.1.453 | 0.008475 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.528 | 0.004808 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.53 | 0.013699 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.1.59 | 0.006494 |
ORF1ab/nsp15A1-B | 171 | A171G | gCc | gGc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171del2 | GCc | --c | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171F | GCc | TTc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171L | GCC | CTA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.117 | 0.0125 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.160.11 | 0.005714 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.160.32 | 0.004292 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.173 | 0.026316 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 171 | A171G | gCc | gGc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp15A1-B | 171 | A171G | gCc | gGc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.177.39 | 0.015385 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp15A1-B | 171 | A171del1 | gCc | g-c | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.212 | 0.016667 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.214.3 | 0.007143 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 1 | B.1.258.9 | 0.005 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcA | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp15A1-B | 171 | A171del1 | GCC | -NN | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.36.25 | 0.002208 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.383 | 0.009009 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.415 | 0.014286 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.467 | 0.04 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 171 | A171T | GcC | AcA | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.501 | 0.007353 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.543 | 0.01 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.550 | 0.013699 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.570 | 0.002941 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.581 | 0.009434 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.585 | 0.027778 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.603 | 0.010638 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp15A1-B | 171 | A171P | Gcc | Ccc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp15A1-B | 171 | A171S | Gcc | Tcc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | C.39 | 0.018868 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp15A1-B | 171 | A171D | gCc | gAc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp15A1-B | 171 | A171A | gcC | gcT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp15A1-B | 171 | A171del | GCC | --- | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp15A1-B | 171 | A171T | Gcc | Acc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp15A1-B | 171 | A171V | gCc | gTc | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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