CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 145

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B145E145EE6597EsyngaAgaG66636663120053-20055
ORF1ab/nsp15A1-B145E145delE6597deldelGAA---129129120053-20055
ORF1ab/nsp15A1-B145E145DE6597DnonsyngaAgaC112650.58035720053-20055
ORF1ab/nsp15A1-B145E145DE6597DnonsyngaAgaT112470.41964320053-20055
ORF1ab/nsp15A1-B145E145KE6597KnonsynGaaAaa54530.98148120053-20055
ORF1ab/nsp15A1-B145E145KE6597KnonsynGaAAaG5410.018518520053-20055
ORF1ab/nsp15A1-B145E145GE6597GnonsyngAagGa3131120053-20055
ORF1ab/nsp15A1-B145E145AE6597AnonsyngAagCa2424120053-20055
ORF1ab/nsp15A1-B145E145XE6597XnonsynGaaTaa20190.9520053-20055
ORF1ab/nsp15A1-B145E145XE6597XnonsynGaATaG2010.0520053-20055
ORF1ab/nsp15A1-B145E145VE6597VnonsyngAagTa1290.7520053-20055
ORF1ab/nsp15A1-B145E145VE6597VnonsyngAAgTT1220.16666720053-20055
ORF1ab/nsp15A1-B145E145VE6597VnonsyngAAgTC1210.083333320053-20055
ORF1ab/nsp15A1-B145E145QE6597QnonsynGaaCaa66120053-20055
ORF1ab/nsp15A1-B145E145LE6597LnonsynGAaTTa22120053-20055
ORF1ab/nsp15A1-B145E145TE6597TnonsynGAAACC22120053-20055
ORF1ab/nsp15A1-B145E145del1E6597del1delGAA-NN210.520053-20055
ORF1ab/nsp15A1-B145E145del1E6597del1delGaa-aa210.520053-20055
ORF1ab/nsp15A1-B145E145NE6597NnonsynGaAAaC11120053-20055
ORF1ab/nsp15A1-B145E145YE6597YnonsynGaATaC11120053-20055
ORF1ab/nsp15A1-B145E145del2E6597del2delgAAg--11120053-20055
ORF1ab/nsp15A1-B145E145PE6597PnonsynGAaCCa11120053-20055

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B145E145EgaAgaG66636663All0.001274
ORF1ab/nsp15A1-B145E145EgaAgaG881881B.1.1.70.000789
ORF1ab/nsp15A1-B145E145EgaAgaG586586B.1.617.20.002207
ORF1ab/nsp15A1-B145E145EgaAgaG527527AY.40.00082
ORF1ab/nsp15A1-B145E145EgaAgaG508508AY.250.003056
ORF1ab/nsp15A1-B145E145EgaAgaG298298AY.1030.00185
ORF1ab/nsp15A1-B145E145EgaAgaG246246AY.430.00109
ORF1ab/nsp15A1-B145E145EgaAgaG234234P.10.003686
ORF1ab/nsp15A1-B145E145EgaAgaG223223B.10.002043
ORF1ab/nsp15A1-B145E145EgaAgaG207207B.1.2410.168019
ORF1ab/nsp15A1-B145E145EgaAgaG207207P.1.80.990431
ORF1ab/nsp15A1-B145E145EgaAgaG195195R.10.017552
ORF1ab/nsp15A1-B145E145EgaAgaG186186B.1.1.5190.007386
ORF1ab/nsp15A1-B145E145EgaAgaG176176AY.200.00684
ORF1ab/nsp15A1-B145E145EgaAgaG153153B.1.6090.073346
ORF1ab/nsp15A1-B145E145EgaAgaG137137B.1.4270.006918
ORF1ab/nsp15A1-B145E145delGAA---129129All0.000025
ORF1ab/nsp15A1-B145E145DgaAgaC65112All0.000012
ORF1ab/nsp15A1-B145E145DgaAgaT47112All0.000009
ORF1ab/nsp15A1-B145E145EgaAgaG101101B.1.20.000889
ORF1ab/nsp15A1-B145E145EgaAgaG9999B.1.1.2910.073497
ORF1ab/nsp15A1-B145E145EgaAgaG9090B.1.3510.002675
ORF1ab/nsp15A1-B145E145EgaAgaG8282AY.440.000499
ORF1ab/nsp15A1-B145E145EgaAgaG5858AY.50.001198
ORF1ab/nsp15A1-B145E145KGaaAaa5354All0.00001
ORF1ab/nsp15A1-B145E145KGaAAaG154All0
ORF1ab/nsp15A1-B145E145EgaAgaG5353AY.30.000527
ORF1ab/nsp15A1-B145E145EgaAgaG4848AY.290.000757
ORF1ab/nsp15A1-B145E145EgaAgaG4848AY.98.10.002325
ORF1ab/nsp15A1-B145E145EgaAgaG4848B.1.10.000871
ORF1ab/nsp15A1-B145E145EgaAgaG4848B.1.5260.001128
ORF1ab/nsp15A1-B145E145EgaAgaG4848P.1.140.002294
ORF1ab/nsp15A1-B145E145EgaAgaG4242AY.1020.001114
ORF1ab/nsp15A1-B145E145delGAA---4040B.1.1.70.000036
ORF1ab/nsp15A1-B145E145EgaAgaG3737B.1.1.3720.025482
ORF1ab/nsp15A1-B145E145EgaAgaG3636B.1.2580.002396
ORF1ab/nsp15A1-B145E145EgaAgaG3434B.1.1770.000448
ORF1ab/nsp15A1-B145E145GgAagGa3131All0.000006
ORF1ab/nsp15A1-B145E145EgaAgaG3131C.370.003598
ORF1ab/nsp15A1-B145E145EgaAgaG3030B.1.4290.000706
ORF1ab/nsp15A1-B145E145EgaAgaG2727AY.46.50.005357
ORF1ab/nsp15A1-B145E145EgaAgaG2626B.1.6280.009161
ORF1ab/nsp15A1-B145E145AgAagCa2424All0.000005
ORF1ab/nsp15A1-B145E145EgaAgaG2424AY.9.20.000882
ORF1ab/nsp15A1-B145E145EgaAgaG2424P.1.70.007663
ORF1ab/nsp15A1-B145E145DgaAgaC1323AY.40.00002
ORF1ab/nsp15A1-B145E145DgaAgaT1023AY.40.000016
ORF1ab/nsp15A1-B145E145EgaAgaG2323AY.90.001555
ORF1ab/nsp15A1-B145E145KGaaAaa2323B.1.1.70.000021
ORF1ab/nsp15A1-B145E145delGAA---2323B.1.20.000203
ORF1ab/nsp15A1-B145E145EgaAgaG2222AY.1200.000818
ORF1ab/nsp15A1-B145E145EgaAgaG2222AY.390.000544
ORF1ab/nsp15A1-B145E145EgaAgaG2121AY.610.0022
ORF1ab/nsp15A1-B145E145XGaaTaa1920All0.000004
ORF1ab/nsp15A1-B145E145XGaATaG120All0
ORF1ab/nsp15A1-B145E145EgaAgaG1919AY.1000.000874
ORF1ab/nsp15A1-B145E145EgaAgaG1919AY.350.004428
ORF1ab/nsp15A1-B145E145EgaAgaG1919AY.39.10.000753
ORF1ab/nsp15A1-B145E145EgaAgaG1919AY.460.001978
ORF1ab/nsp15A1-B145E145EgaAgaG1717AY.260.000481
ORF1ab/nsp15A1-B145E145EgaAgaG1414AY.1100.001578
ORF1ab/nsp15A1-B145E145EgaAgaG1414B.1.2430.000974
ORF1ab/nsp15A1-B145E145EgaAgaG1313P.1.170.002103
ORF1ab/nsp15A1-B145E145VgAagTa912All0.000002
ORF1ab/nsp15A1-B145E145VgAAgTT212All0
ORF1ab/nsp15A1-B145E145VgAAgTC112All0
ORF1ab/nsp15A1-B145E145EgaAgaG1212AY.470.000373
ORF1ab/nsp15A1-B145E145EgaAgaG1212B.1.177.770.008715
ORF1ab/nsp15A1-B145E145EgaAgaG1212P.1.150.002788
ORF1ab/nsp15A1-B145E145DgaAgaC1111B.1.4270.000555
ORF1ab/nsp15A1-B145E145EgaAgaG1010AY.60.000411
ORF1ab/nsp15A1-B145E145GgAagGa1010B.1.1.70.000009
ORF1ab/nsp15A1-B145E145EgaAgaG1010B.1.5960.000871
ORF1ab/nsp15A1-B145E145EgaAgaG99AY.1090.006657
ORF1ab/nsp15A1-B145E145EgaAgaG99AY.120.002845
ORF1ab/nsp15A1-B145E145EgaAgaG99AY.270.000582
ORF1ab/nsp15A1-B145E145EgaAgaG99AY.650.004797
ORF1ab/nsp15A1-B145E145EgaAgaG99AY.980.000711
ORF1ab/nsp15A1-B145E145DgaAgaC59B.1.1.70.000004
ORF1ab/nsp15A1-B145E145DgaAgaT49B.1.1.70.000004
ORF1ab/nsp15A1-B145E145EgaAgaG99B.1.177.40.0019
ORF1ab/nsp15A1-B145E145EgaAgaG99C.360.008197
ORF1ab/nsp15A1-B145E145EgaAgaG99C.36.30.005105
ORF1ab/nsp15A1-B145E145EgaAgaG88AY.1190.000282
ORF1ab/nsp15A1-B145E145KGaaAaa88AY.160.003037
ORF1ab/nsp15A1-B145E145EgaAgaG88AY.16.10.003759
ORF1ab/nsp15A1-B145E145EgaAgaG88AY.230.000558
ORF1ab/nsp15A1-B145E145EgaAgaG88AY.4.20.000174
ORF1ab/nsp15A1-B145E145DgaAgaT78AY.430.000031
ORF1ab/nsp15A1-B145E145DgaAgaC18AY.430.000004
ORF1ab/nsp15A1-B145E145EgaAgaG88AY.750.000448
ORF1ab/nsp15A1-B145E145EgaAgaG88B.1.1.4340.002788
ORF1ab/nsp15A1-B145E145EgaAgaG88B.1.5650.006483
ORF1ab/nsp15A1-B145E145EgaAgaG88B.390.018648
ORF1ab/nsp15A1-B145E145EgaAgaG88P.1.40.007812
ORF1ab/nsp15A1-B145E145GgAagGa77AY.1030.000043
ORF1ab/nsp15A1-B145E145EgaAgaG77AY.330.000467
ORF1ab/nsp15A1-B145E145EgaAgaG77AY.7.10.000789
ORF1ab/nsp15A1-B145E145DgaAgaT47B.10.000037
ORF1ab/nsp15A1-B145E145DgaAgaC37B.10.000027
ORF1ab/nsp15A1-B145E145AgAagCa77B.1.1770.000092
ORF1ab/nsp15A1-B145E145DgaAgaT77B.1.2340.000924
ORF1ab/nsp15A1-B145E145EgaAgaG77B.1.3960.00494
ORF1ab/nsp15A1-B145E145EgaAgaG77B.1.6210.00062
ORF1ab/nsp15A1-B145E145EgaAgaG77P.1.60.013619
ORF1ab/nsp15A1-B145E145EgaAgaG77Q.10.000884
ORF1ab/nsp15A1-B145E145EgaAgaG66A.2.50.002994
ORF1ab/nsp15A1-B145E145QGaaCaa66All0.000001
ORF1ab/nsp15A1-B145E145EgaAgaG66AY.1130.000854
ORF1ab/nsp15A1-B145E145EgaAgaG66AY.420.000241
ORF1ab/nsp15A1-B145E145EgaAgaG66AY.450.00073
ORF1ab/nsp15A1-B145E145EgaAgaG66AY.46.60.000433
ORF1ab/nsp15A1-B145E145EgaAgaG66AY.99.20.000553
ORF1ab/nsp15A1-B145E145AgAagCa66B.1.1.70.000005
ORF1ab/nsp15A1-B145E145EgaAgaG66B.1.1600.000187
ORF1ab/nsp15A1-B145E145KGaaAaa66B.1.1770.000079
ORF1ab/nsp15A1-B145E145EgaAgaG66B.1.351.50.003597
ORF1ab/nsp15A1-B145E145delGAA---66B.1.617.20.000023
ORF1ab/nsp15A1-B145E145DgaAgaC56B.1.617.20.000019
ORF1ab/nsp15A1-B145E145DgaAgaT16B.1.617.20.000004
ORF1ab/nsp15A1-B145E145EgaAgaG66Q.80.000989
ORF1ab/nsp15A1-B145E145EgaAgaG55AY.320.002662
ORF1ab/nsp15A1-B145E145EgaAgaG55AY.9.10.000419
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.1.2220.00102
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.1.280.001556
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.110.30.003592
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.177.600.001092
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.2390.006105
ORF1ab/nsp15A1-B145E145delGAA---55B.1.3510.000149
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.360.00073
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.3620.007704
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.5030.012438
ORF1ab/nsp15A1-B145E145EgaAgaG55B.1.5610.001985
ORF1ab/nsp15A1-B145E145DgaAgaC55P.1.140.000239
ORF1ab/nsp15A1-B145E145delGAA---440.222222
ORF1ab/nsp15A1-B145E145EgaAgaG44AY.1140.000924
ORF1ab/nsp15A1-B145E145EgaAgaG44AY.1170.000338
ORF1ab/nsp15A1-B145E145EgaAgaG44AY.120.10.001284
ORF1ab/nsp15A1-B145E145EgaAgaG44AY.140.000352
ORF1ab/nsp15A1-B145E145DgaAgaC34AY.30.00003
ORF1ab/nsp15A1-B145E145DgaAgaT14AY.30.00001
ORF1ab/nsp15A1-B145E145KGaaAaa44AY.40.000006
ORF1ab/nsp15A1-B145E145EgaAgaG44AY.4.50.00043
ORF1ab/nsp15A1-B145E145delGAA---44AY.430.000018
ORF1ab/nsp15A1-B145E145XGaaTaa44B.1.1.70.000004
ORF1ab/nsp15A1-B145E145EgaAgaG44B.1.5250.000453
ORF1ab/nsp15A1-B145E145delGAA---44B.1.5260.000094
ORF1ab/nsp15A1-B145E145EgaAgaG44P.1.120.001936
ORF1ab/nsp15A1-B145E145EgaAgaG44P.20.000747
ORF1ab/nsp15A1-B145E145EgaAgaG33A.23.10.002113
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.1060.001005
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.1160.00086
ORF1ab/nsp15A1-B145E145AgAagCa33AY.1170.000254
ORF1ab/nsp15A1-B145E145delGAA---33AY.1210.000406
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.280.005671
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.3.10.000256
ORF1ab/nsp15A1-B145E145GgAagGa33AY.40.000005
ORF1ab/nsp15A1-B145E145KGaaAaa33AY.430.000013
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.70.000588
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.710.001425
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.920.000862
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.950.002283
ORF1ab/nsp15A1-B145E145EgaAgaG33AY.990.003148
ORF1ab/nsp15A1-B145E145KGaaAaa23B.1.10.000036
ORF1ab/nsp15A1-B145E145KGaAAaG13B.1.10.000018
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.1.2140.000166
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.1.2690.00406
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.177.440.001557
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.2320.001612
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.3360.007317
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.3810.023438
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.466.20.001174
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.4970.000944
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.5460.011111
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.5640.001278
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.5750.00091
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.6050.017857
ORF1ab/nsp15A1-B145E145EgaAgaG33B.1.6370.000219
ORF1ab/nsp15A1-B145E145EgaAgaG33B.6.60.002667
ORF1ab/nsp15A1-B145E145XGaaTaa33D.20.000225
ORF1ab/nsp15A1-B145E145EgaAgaG33D.20.000225
ORF1ab/nsp15A1-B145E145DgaAgaT33P.10.000047
ORF1ab/nsp15A1-B145E145LGAaTTa220.111111
ORF1ab/nsp15A1-B145E145LGAaTTa22All0
ORF1ab/nsp15A1-B145E145TGAAACC22All0
ORF1ab/nsp15A1-B145E145del1GAA-NN12All0
ORF1ab/nsp15A1-B145E145del1Gaa-aa12All0
ORF1ab/nsp15A1-B145E145DgaAgaC12AY.1190.000035
ORF1ab/nsp15A1-B145E145DgaAgaT12AY.1190.000035
ORF1ab/nsp15A1-B145E145delGAA---22AY.1200.000074
ORF1ab/nsp15A1-B145E145DgaAgaC22AY.1200.000074
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.1210.000271
ORF1ab/nsp15A1-B145E145QGaaCaa22AY.140.000176
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.160.000759
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.190.002281
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.240.000862
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.29.10.000441
ORF1ab/nsp15A1-B145E145delGAA---22AY.30.00002
ORF1ab/nsp15A1-B145E145GgAagGa22AY.30.00002
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.34.10.00102
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.360.000296
ORF1ab/nsp15A1-B145E145DgaAgaT12AY.390.000025
ORF1ab/nsp15A1-B145E145DgaAgaC12AY.390.000025
ORF1ab/nsp15A1-B145E145QGaaCaa22AY.430.000009
ORF1ab/nsp15A1-B145E145DgaAgaC22AY.46.60.000144
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.540.000191
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.550.001835
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.670.000929
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.730.001331
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.840.000875
ORF1ab/nsp15A1-B145E145EgaAgaG22AY.850.000854
ORF1ab/nsp15A1-B145E145AgAagCa22AY.990.002099
ORF1ab/nsp15A1-B145E145VgAagTa22AY.99.20.000184
ORF1ab/nsp15A1-B145E145EgaAgaG22B0.000256
ORF1ab/nsp15A1-B145E145delGAA---22B.10.000018
ORF1ab/nsp15A1-B145E145delGAA---22B.1.10.000036
ORF1ab/nsp15A1-B145E145DgaAgaT12B.1.10.000018
ORF1ab/nsp15A1-B145E145DgaAgaC12B.1.10.000018
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1.250.001137
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1.3170.000823
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1.4200.002012
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1.4660.017391
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1.5230.003125
ORF1ab/nsp15A1-B145E145TGAAACC22B.1.1.70.000002
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1110.00235
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1280.001271
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.130.004751
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.1390.001466
ORF1ab/nsp15A1-B145E145DgaAgaT12B.1.1600.000031
ORF1ab/nsp15A1-B145E145DgaAgaC12B.1.1600.000031
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.177.70.00033
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.177.750.002081
ORF1ab/nsp15A1-B145E145DgaAgaC22B.1.20.000018
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.2210.000142
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.2400.000431
ORF1ab/nsp15A1-B145E145delGAA---22B.1.2580.000133
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.258.170.000208
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.3420.2
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.3970.009709
ORF1ab/nsp15A1-B145E145delGAA---22B.1.4290.000047
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.4560.006536
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.4780.023529
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.5160.003914
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.5600.009259
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.5760.001813
ORF1ab/nsp15A1-B145E145delGAA---22B.1.5960.000174
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.617.10.000258
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.6180.008065
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.760.022727
ORF1ab/nsp15A1-B145E145EgaAgaG22B.1.9.50.011364
ORF1ab/nsp15A1-B145E145GgAagGa22D.20.00015
ORF1ab/nsp15A1-B145E145EgaAgaG22P.1.10.000635
ORF1ab/nsp15A1-B145E145EgaAgaG22Q.30.00029
ORF1ab/nsp15A1-B145E145DgaAgaC110.055556
ORF1ab/nsp15A1-B145E145EgaAgaG11A0.000387
ORF1ab/nsp15A1-B145E145EgaAgaG11A.10.000282
ORF1ab/nsp15A1-B145E145EgaAgaG11A.20.000662
ORF1ab/nsp15A1-B145E145del2gAAg--11All0
ORF1ab/nsp15A1-B145E145PGAaCCa11All0
ORF1ab/nsp15A1-B145E145YGaATaC11All0
ORF1ab/nsp15A1-B145E145NGaAAaC11All0
ORF1ab/nsp15A1-B145E145EgaAgaG11AM.40.003571
ORF1ab/nsp15A1-B145E145EgaAgaG11AP.10.001502
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.100.00053
ORF1ab/nsp15A1-B145E145delGAA---11AY.1000.000046
ORF1ab/nsp15A1-B145E145delGAA---11AY.1070.000466
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.1070.000466
ORF1ab/nsp15A1-B145E145delGAA---11AY.1080.001103
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.1110.000183
ORF1ab/nsp15A1-B145E145VgAAgTC11AY.1130.000142
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.1180.000063
ORF1ab/nsp15A1-B145E145delGAA---11AY.1180.000063
ORF1ab/nsp15A1-B145E145KGaaAaa11AY.1200.000037
ORF1ab/nsp15A1-B145E145GgAagGa11AY.200.000039
ORF1ab/nsp15A1-B145E145DgaAgaC11AY.230.00007
ORF1ab/nsp15A1-B145E145KGaaAaa11AY.240.000431
ORF1ab/nsp15A1-B145E145KGaaAaa11AY.250.000006
ORF1ab/nsp15A1-B145E145delGAA---11AY.250.000006
ORF1ab/nsp15A1-B145E145AgAagCa11AY.260.000028
ORF1ab/nsp15A1-B145E145AgAagCa11AY.30.00001
ORF1ab/nsp15A1-B145E145XGaaTaa11AY.340.000097
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.340.000097
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.370.000316
ORF1ab/nsp15A1-B145E145XGaaTaa11AY.40.000002
ORF1ab/nsp15A1-B145E145QGaaCaa11AY.40.000002
ORF1ab/nsp15A1-B145E145AgAagCa11AY.40.000002
ORF1ab/nsp15A1-B145E145VgAagTa11AY.40.000002
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.4.2.10.000149
ORF1ab/nsp15A1-B145E145XGaaTaa11AY.4.50.000107
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.400.000964
ORF1ab/nsp15A1-B145E145VgAagTa11AY.430.000004
ORF1ab/nsp15A1-B145E145GgAagGa11AY.440.000006
ORF1ab/nsp15A1-B145E145delGAA---11AY.440.000006
ORF1ab/nsp15A1-B145E145XGaATaG11AY.440.000006
ORF1ab/nsp15A1-B145E145VgAagTa11AY.450.000122
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.46.40.000165
ORF1ab/nsp15A1-B145E145QGaaCaa11AY.46.60.000072
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.490.003195
ORF1ab/nsp15A1-B145E145delGAA---11AY.50.000021
ORF1ab/nsp15A1-B145E145AgAagCa11AY.50.000021
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.530.000288
ORF1ab/nsp15A1-B145E145KGaaAaa11AY.540.000095
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.560.001605
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.570.000656
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.590.00053
ORF1ab/nsp15A1-B145E145XGaaTaa11AY.610.000105
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.620.000436
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.660.00107
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.7.20.000559
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.720.001361
ORF1ab/nsp15A1-B145E145DgaAgaT11AY.750.000056
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.75.10.00018
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.790.001211
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.80.000606
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.800.001129
ORF1ab/nsp15A1-B145E145del2gAAg--11AY.820.001357
ORF1ab/nsp15A1-B145E145delGAA---11AY.840.000437
ORF1ab/nsp15A1-B145E145DgaAgaC11AY.90.000068
ORF1ab/nsp15A1-B145E145delGAA---11AY.9.20.000037
ORF1ab/nsp15A1-B145E145GgAagGa11AY.9.20.000037
ORF1ab/nsp15A1-B145E145XGaaTaa11AY.9.20.000037
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.900.000684
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.930.000273
ORF1ab/nsp15A1-B145E145EgaAgaG11AY.960.002075
ORF1ab/nsp15A1-B145E145delGAA---11AY.990.001049
ORF1ab/nsp15A1-B145E145delGAA---11AZ.20.000821
ORF1ab/nsp15A1-B145E145DgaAgaT11AZ.30.00152
ORF1ab/nsp15A1-B145E145GgAagGa11B.10.000009
ORF1ab/nsp15A1-B145E145XGaaTaa11B.10.000009
ORF1ab/nsp15A1-B145E145VgAAgTT11B.1.10.000018
ORF1ab/nsp15A1-B145E145AgAagCa11B.1.10.000018
ORF1ab/nsp15A1-B145E145XGaaTaa11B.1.10.000018
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.10.000327
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.1210.002427
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.1610.003534
ORF1ab/nsp15A1-B145E145delGAA---11B.1.1.1740.003378
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.1890.001513
ORF1ab/nsp15A1-B145E145delGAA---11B.1.1.2070.001182
ORF1ab/nsp15A1-B145E145AgAagCa11B.1.1.2160.00089
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.2160.00089
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.2280.003049
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.2370.005405
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.2770.000759
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.2790.001121
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.2840.000107
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3010.001179
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3030.002762
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3060.000438
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.310.066667
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3160.000925
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3180.000302
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3220.008772
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3260.001761
ORF1ab/nsp15A1-B145E145DgaAgaC11B.1.1.3480.000796
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3480.000796
ORF1ab/nsp15A1-B145E145delGAA---11B.1.1.3510.002793
ORF1ab/nsp15A1-B145E145DgaAgaT11B.1.1.3540.004386
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3680.003086
ORF1ab/nsp15A1-B145E145DgaAgaC11B.1.1.3720.000689
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3740.002375
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3780.007299
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.3890.006061
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.390.00051
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.4030.025641
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.4070.041667
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.4090.002833
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.410.006329
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.440.00241
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.4480.002033
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.4640.001473
ORF1ab/nsp15A1-B145E145NGaAAaC11B.1.1.70.000001
ORF1ab/nsp15A1-B145E145YGaATaC11B.1.1.70.000001
ORF1ab/nsp15A1-B145E145VgAagTa11B.1.1.70.000001
ORF1ab/nsp15A1-B145E145del1GAA-NN11B.1.1.70.000001
ORF1ab/nsp15A1-B145E145delGAA---11B.1.1.700.000341
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1.720.030303
ORF1ab/nsp15A1-B145E145DgaAgaC11B.1.1100.004525
ORF1ab/nsp15A1-B145E145DgaAgaC11B.1.1260.001276
ORF1ab/nsp15A1-B145E145XGaaTaa11B.1.160.140.002119
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.160.330.004425
ORF1ab/nsp15A1-B145E145DgaAgaT11B.1.1770.000013
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.177.170.000821
ORF1ab/nsp15A1-B145E145XGaaTaa11B.1.177.440.000519
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.177.580.001332
ORF1ab/nsp15A1-B145E145GgAagGa11B.1.177.620.001192
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.177.670.007634
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.177.870.000728
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.1950.005025
ORF1ab/nsp15A1-B145E145KGaaAaa11B.1.20.000009
ORF1ab/nsp15A1-B145E145XGaaTaa11B.1.20.000009
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.220.001318
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.2340.000132
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.2360.002053
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.2370.004975
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.258.110.000396
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.2730.012987
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.3110.000275
ORF1ab/nsp15A1-B145E145GgAagGa11B.1.3510.00003
ORF1ab/nsp15A1-B145E145XGaaTaa11B.1.3510.00003
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.351.20.000303
ORF1ab/nsp15A1-B145E145DgaAgaC11B.1.360.000146
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.36.10.00114
ORF1ab/nsp15A1-B145E145delGAA---11B.1.36.10.00114
ORF1ab/nsp15A1-B145E145KGaaAaa11B.1.36.10.00114
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.36.100.004785
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.36.270.000763
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.36.80.001
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.3610.001289
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.3750.00082
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.3780.006849
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.3990.001934
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.4000.000429
ORF1ab/nsp15A1-B145E145delGAA---11B.1.416.10.001563
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.4220.000812
ORF1ab/nsp15A1-B145E145delGAA---11B.1.4270.00005
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.4280.00102
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.4530.003236
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.4700.001404
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.4710.002732
ORF1ab/nsp15A1-B145E145VgAAgTT11B.1.4970.000315
ORF1ab/nsp15A1-B145E145delGAA---11B.1.5150.014493
ORF1ab/nsp15A1-B145E145delGAA---11B.1.5170.000427
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.5200.021739
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.5240.001406
ORF1ab/nsp15A1-B145E145delGAA---11B.1.5240.001406
ORF1ab/nsp15A1-B145E145DgaAgaT11B.1.5300.007143
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.5450.014493
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.5580.004566
ORF1ab/nsp15A1-B145E145DgaAgaT11B.1.5600.00463
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.5680.001111
ORF1ab/nsp15A1-B145E145delGAA---11B.1.5770.000687
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.6020.006536
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.6120.002653
ORF1ab/nsp15A1-B145E145delGAA---11B.1.617.10.000129
ORF1ab/nsp15A1-B145E145PGAaCCa11B.1.617.20.000004
ORF1ab/nsp15A1-B145E145GgAagGa11B.1.617.20.000004
ORF1ab/nsp15A1-B145E145XGaaTaa11B.1.6190.000871
ORF1ab/nsp15A1-B145E145delGAA---11B.1.6200.000946
ORF1ab/nsp15A1-B145E145EgaAgaG11B.1.6360.006711
ORF1ab/nsp15A1-B145E145DgaAgaC11B.1.88.10.004808
ORF1ab/nsp15A1-B145E145EgaAgaG11B.230.002924
ORF1ab/nsp15A1-B145E145del1Gaa-aa11B.340.013699
ORF1ab/nsp15A1-B145E145VgAagTa11B.60.00091
ORF1ab/nsp15A1-B145E145VgAagTa11D.20.000075
ORF1ab/nsp15A1-B145E145EgaAgaG11N.50.001767
ORF1ab/nsp15A1-B145E145KGaaAaa11P.1.10.000318
ORF1ab/nsp15A1-B145E145delGAA---11P.1.150.000232
ORF1ab/nsp15A1-B145E145EgaAgaG11P.1.160.000374
ORF1ab/nsp15A1-B145E145EgaAgaG11P.1.20.001156
ORF1ab/nsp15A1-B145E145EgaAgaG11P.30.001595
ORF1ab/nsp15A1-B145E145VgAagTa11Q.80.000165
ORF1ab/nsp15A1-B145E145delGAA---11Q.80.000165