CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 128 & Codon = Tat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B128D128YD6580YnonsynGatTat29292929120002-20004

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B128D128YGatTat29292929All0.00056
ORF1ab/nsp15A1-B128D128YGatTat400400AU.20.968523
ORF1ab/nsp15A1-B128D128YGatTat377377B.1.3620.580894
ORF1ab/nsp15A1-B128D128YGatTat372372B.1.1.70.000333
ORF1ab/nsp15A1-B128D128YGatTat185185AY.40.000288
ORF1ab/nsp15A1-B128D128YGatTat140140B.1.617.20.000527
ORF1ab/nsp15A1-B128D128YGatTat122122B.1.1600.003805
ORF1ab/nsp15A1-B128D128YGatTat8787AY.1020.002307
ORF1ab/nsp15A1-B128D128YGatTat6161AY.1030.000379
ORF1ab/nsp15A1-B128D128YGatTat5656AY.430.000248
ORF1ab/nsp15A1-B128D128YGatTat5555B.1.20.000484
ORF1ab/nsp15A1-B128D128YGatTat5353A.150.84127
ORF1ab/nsp15A1-B128D128YGatTat5252B.1.1.5190.002065
ORF1ab/nsp15A1-B128D128YGatTat5151AY.250.000307
ORF1ab/nsp15A1-B128D128YGatTat4747AY.440.000286
ORF1ab/nsp15A1-B128D128YGatTat4747AY.98.10.002276
ORF1ab/nsp15A1-B128D128YGatTat4646AY.30.000458
ORF1ab/nsp15A1-B128D128YGatTat4646AY.34.10.023457
ORF1ab/nsp15A1-B128D128YGatTat4545P.10.000709
ORF1ab/nsp15A1-B128D128YGatTat4242AY.460.004371
ORF1ab/nsp15A1-B128D128YGatTat4040B.10.000366
ORF1ab/nsp15A1-B128D128YGatTat3636AY.46.60.002599
ORF1ab/nsp15A1-B128D128YGatTat2525AY.99.20.002304
ORF1ab/nsp15A1-B128D128YGatTat2525B.1.1.5260.088652
ORF1ab/nsp15A1-B128D128YGatTat2222AY.90.001487
ORF1ab/nsp15A1-B128D128YGatTat2121B.1.621.10.010622
ORF1ab/nsp15A1-B128D128YGatTat1717AY.1050.010932
ORF1ab/nsp15A1-B128D128YGatTat1616B.1.4290.000376
ORF1ab/nsp15A1-B128D128YGatTat1515AY.600.014071
ORF1ab/nsp15A1-B128D128YGatTat1414AY.390.000346
ORF1ab/nsp15A1-B128D128YGatTat1414B.1.10.000254
ORF1ab/nsp15A1-B128D128YGatTat1414R.10.00126
ORF1ab/nsp15A1-B128D128YGatTat1313AY.260.000368
ORF1ab/nsp15A1-B128D128YGatTat1313B.1.1.3480.01035
ORF1ab/nsp15A1-B128D128YGatTat1212A.10.003382
ORF1ab/nsp15A1-B128D128YGatTat1212AY.300.004749
ORF1ab/nsp15A1-B128D128YGatTat1212P.1.140.000574
ORF1ab/nsp15A1-B128D128YGatTat1010B.1.1770.000132
ORF1ab/nsp15A1-B128D128YGatTat99AY.420.000362
ORF1ab/nsp15A1-B128D128YGatTat99B.1.3510.000268
ORF1ab/nsp15A1-B128D128YGatTat99B.1.4690.032491
ORF1ab/nsp15A1-B128D128YGatTat88B.1.1.2140.000444
ORF1ab/nsp15A1-B128D128YGatTat88B.1.36.290.004139
ORF1ab/nsp15A1-B128D128YGatTat77AY.140.000616
ORF1ab/nsp15A1-B128D128YGatTat77AY.4.20.000152
ORF1ab/nsp15A1-B128D128YGatTat77B.1.1.280.002179
ORF1ab/nsp15A1-B128D128YGatTat66AY.470.000187
ORF1ab/nsp15A1-B128D128YGatTat66B.1.2340.000792
ORF1ab/nsp15A1-B128D128YGatTat66B.1.2400.001293
ORF1ab/nsp15A1-B128D128YGatTat66B.1.466.20.002347
ORF1ab/nsp15A1-B128D128YGatTat66B.1.6210.000531
ORF1ab/nsp15A1-B128D128YGatTat66C.370.000696
ORF1ab/nsp15A1-B128D128YGatTat55AY.1130.000712
ORF1ab/nsp15A1-B128D128YGatTat55AY.200.000194
ORF1ab/nsp15A1-B128D128YGatTat55AY.290.000079
ORF1ab/nsp15A1-B128D128YGatTat55AY.75.10.000902
ORF1ab/nsp15A1-B128D128YGatTat55AY.9.20.000184
ORF1ab/nsp15A1-B128D128YGatTat55B.1.1.700.001705
ORF1ab/nsp15A1-B128D128YGatTat55B.1.177.550.011655
ORF1ab/nsp15A1-B128D128YGatTat55B.1.5260.000118
ORF1ab/nsp15A1-B128D128YGatTat44AY.1210.000541
ORF1ab/nsp15A1-B128D128YGatTat44AY.450.000487
ORF1ab/nsp15A1-B128D128YGatTat44AY.920.001149
ORF1ab/nsp15A1-B128D128YGatTat44B.1.2580.000266
ORF1ab/nsp15A1-B128D128YGatTat33AY.100.00159
ORF1ab/nsp15A1-B128D128YGatTat33AY.1190.000106
ORF1ab/nsp15A1-B128D128YGatTat33AY.46.40.000494
ORF1ab/nsp15A1-B128D128YGatTat33AY.60.000123
ORF1ab/nsp15A1-B128D128YGatTat33AY.610.000314
ORF1ab/nsp15A1-B128D128YGatTat33AY.7.10.000338
ORF1ab/nsp15A1-B128D128YGatTat33B.1.1.1350.014085
ORF1ab/nsp15A1-B128D128YGatTat33B.1.177.860.00055
ORF1ab/nsp15A1-B128D128YGatTat33B.1.1890.012876
ORF1ab/nsp15A1-B128D128YGatTat33B.1.3590.068182
ORF1ab/nsp15A1-B128D128YGatTat33B.1.360.000438
ORF1ab/nsp15A1-B128D128YGatTat33B.1.3750.002459
ORF1ab/nsp15A1-B128D128YGatTat33B.1.5960.000261
ORF1ab/nsp15A1-B128D128YGatTat33D.20.000225
ORF1ab/nsp15A1-B128D128YGatTat22AY.1060.00067
ORF1ab/nsp15A1-B128D128YGatTat22AY.1170.000169
ORF1ab/nsp15A1-B128D128YGatTat22AY.280.003781
ORF1ab/nsp15A1-B128D128YGatTat22AY.330.000134
ORF1ab/nsp15A1-B128D128YGatTat22AY.360.000296
ORF1ab/nsp15A1-B128D128YGatTat22AY.4.50.000215
ORF1ab/nsp15A1-B128D128YGatTat22AY.480.00093
ORF1ab/nsp15A1-B128D128YGatTat22AY.50.000041
ORF1ab/nsp15A1-B128D128YGatTat22AY.5.30.000675
ORF1ab/nsp15A1-B128D128YGatTat22AY.5.40.000553
ORF1ab/nsp15A1-B128D128YGatTat22AY.620.000871
ORF1ab/nsp15A1-B128D128YGatTat22AY.750.000112
ORF1ab/nsp15A1-B128D128YGatTat22AY.840.000875
ORF1ab/nsp15A1-B128D128YGatTat22AY.9.10.000167
ORF1ab/nsp15A1-B128D128YGatTat22B.1.1.3170.000823
ORF1ab/nsp15A1-B128D128YGatTat22B.1.1110.00235
ORF1ab/nsp15A1-B128D128YGatTat22B.1.177.730.001133
ORF1ab/nsp15A1-B128D128YGatTat22B.1.221.30.001667
ORF1ab/nsp15A1-B128D128YGatTat22B.1.36.190.018519
ORF1ab/nsp15A1-B128D128YGatTat22B.1.4620.014493
ORF1ab/nsp15A1-B128D128YGatTat22B.1.4660.046512
ORF1ab/nsp15A1-B128D128YGatTat22B.1.9.50.011364
ORF1ab/nsp15A1-B128D128YGatTat22P.1.150.000465
ORF1ab/nsp15A1-B128D128YGatTat22Q.40.00091
ORF1ab/nsp15A1-B128D128YGatTat11A.2.50.000499
ORF1ab/nsp15A1-B128D128YGatTat11AY.10.000396
ORF1ab/nsp15A1-B128D128YGatTat11AY.1000.000046
ORF1ab/nsp15A1-B128D128YGatTat11AY.1070.000466
ORF1ab/nsp15A1-B128D128YGatTat11AY.1100.000113
ORF1ab/nsp15A1-B128D128YGatTat11AY.1110.000183
ORF1ab/nsp15A1-B128D128YGatTat11AY.1160.000287
ORF1ab/nsp15A1-B128D128YGatTat11AY.116.10.000311
ORF1ab/nsp15A1-B128D128YGatTat11AY.1180.000063
ORF1ab/nsp15A1-B128D128YGatTat11AY.120.10.000321
ORF1ab/nsp15A1-B128D128YGatTat11AY.130.000161
ORF1ab/nsp15A1-B128D128YGatTat11AY.190.00114
ORF1ab/nsp15A1-B128D128YGatTat11AY.4.10.000737
ORF1ab/nsp15A1-B128D128YGatTat11AY.4.40.000409
ORF1ab/nsp15A1-B128D128YGatTat11AY.530.000288
ORF1ab/nsp15A1-B128D128YGatTat11AY.550.000917
ORF1ab/nsp15A1-B128D128YGatTat11AY.670.000464
ORF1ab/nsp15A1-B128D128YGatTat11AY.7.20.000559
ORF1ab/nsp15A1-B128D128YGatTat11AY.700.000209
ORF1ab/nsp15A1-B128D128YGatTat11AY.730.000665
ORF1ab/nsp15A1-B128D128YGatTat11AY.860.00083
ORF1ab/nsp15A1-B128D128YGatTat11AY.900.000684
ORF1ab/nsp15A1-B128D128YGatTat11AY.930.000273
ORF1ab/nsp15A1-B128D128YGatTat11AY.980.000079
ORF1ab/nsp15A1-B128D128YGatTat11AY.990.001049
ORF1ab/nsp15A1-B128D128YGatTat11AZ.20.000821
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.10.000327
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.1010.01
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2200.001859
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2220.000204
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2530.002506
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2630.001558
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.270.00565
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2770.000759
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2840.000107
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2860.002899
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.3120.001912
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.3260.001761
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.3980.003226
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.4170.002703
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.540.003021
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.630.000386
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.980.018519
ORF1ab/nsp15A1-B128D128YGatTat11B.1.177.160.000664
ORF1ab/nsp15A1-B128D128YGatTat11B.1.177.40.000211
ORF1ab/nsp15A1-B128D128YGatTat11B.1.177.70.000165
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2060.000816
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2100.002132
ORF1ab/nsp15A1-B128D128YGatTat11B.1.220.001318
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2230.002778
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2430.00007
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2800.007143
ORF1ab/nsp15A1-B128D128YGatTat11B.1.3110.000275
ORF1ab/nsp15A1-B128D128YGatTat11B.1.36.360.000602
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4110.003704
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4160.001269
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4270.00005
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4280.00102
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4590.004082
ORF1ab/nsp15A1-B128D128YGatTat11B.1.5300.007143
ORF1ab/nsp15A1-B128D128YGatTat11B.1.5600.00463
ORF1ab/nsp15A1-B128D128YGatTat11B.1.5870.001898
ORF1ab/nsp15A1-B128D128YGatTat11B.1.6090.000479
ORF1ab/nsp15A1-B128D128YGatTat11B.1.617.10.000129
ORF1ab/nsp15A1-B128D128YGatTat11B.1.6200.000946
ORF1ab/nsp15A1-B128D128YGatTat11B.30.000831
ORF1ab/nsp15A1-B128D128YGatTat11B.3.10.001658
ORF1ab/nsp15A1-B128D128YGatTat11B.6.20.0625