CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 128

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B128D128YD6580YnonsynGatTat29292929120002-20004
ORF1ab/nsp15A1-B128D128GD6580GnonsyngAtgGt12691269120002-20004
ORF1ab/nsp15A1-B128D128DD6580DsyngaTgaC324324120002-20004
ORF1ab/nsp15A1-B128D128ED6580EnonsyngaTgaG2852140.75087720002-20004
ORF1ab/nsp15A1-B128D128ED6580EnonsyngaTgaA285710.24912320002-20004
ORF1ab/nsp15A1-B128D128AD6580AnonsyngAtgCt190190120002-20004
ORF1ab/nsp15A1-B128D128delD6580deldelGAT---153153120002-20004
ORF1ab/nsp15A1-B128D128ND6580NnonsynGatAat1331320.99248120002-20004
ORF1ab/nsp15A1-B128D128ND6580NnonsynGaTAaC13310.007518820002-20004
ORF1ab/nsp15A1-B128D128HD6580HnonsynGatCat7474120002-20004
ORF1ab/nsp15A1-B128D128VD6580VnonsyngAtgTt1180.72727320002-20004
ORF1ab/nsp15A1-B128D128VD6580VnonsyngATgTA1130.27272720002-20004
ORF1ab/nsp15A1-B128D128del1D6580del1delGat-at530.620002-20004
ORF1ab/nsp15A1-B128D128del1D6580del1delGaT-aC510.220002-20004
ORF1ab/nsp15A1-B128D128del1D6580del1delGAT-NN510.220002-20004
ORF1ab/nsp15A1-B128D128del2D6580del2delGAT--N11120002-20004
ORF1ab/nsp15A1-B128D128XD6580XnonsynGaTTaA11120002-20004

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B128D128YGatTat29292929All0.00056
ORF1ab/nsp15A1-B128D128GgAtgGt12691269All0.000243
ORF1ab/nsp15A1-B128D128GgAtgGt456456B.1.20.004015
ORF1ab/nsp15A1-B128D128YGatTat400400AU.20.968523
ORF1ab/nsp15A1-B128D128YGatTat377377B.1.3620.580894
ORF1ab/nsp15A1-B128D128YGatTat372372B.1.1.70.000333
ORF1ab/nsp15A1-B128D128DgaTgaC324324All0.000062
ORF1ab/nsp15A1-B128D128EgaTgaG214285All0.000041
ORF1ab/nsp15A1-B128D128EgaTgaA71285All0.000014
ORF1ab/nsp15A1-B128D128GgAtgGt208208B.1.1.70.000186
ORF1ab/nsp15A1-B128D128AgAtgCt190190All0.000036
ORF1ab/nsp15A1-B128D128YGatTat185185AY.40.000288
ORF1ab/nsp15A1-B128D128GgAtgGt157157AY.98.10.007604
ORF1ab/nsp15A1-B128D128delGAT---153153All0.000029
ORF1ab/nsp15A1-B128D128YGatTat140140B.1.617.20.000527
ORF1ab/nsp15A1-B128D128NGatAat132133All0.000025
ORF1ab/nsp15A1-B128D128NGaTAaC1133All0
ORF1ab/nsp15A1-B128D128YGatTat122122B.1.1600.003805
ORF1ab/nsp15A1-B128D128DgaTgaC9797B.1.617.20.000365
ORF1ab/nsp15A1-B128D128GgAtgGt9393B.1.3690.026526
ORF1ab/nsp15A1-B128D128GgAtgGt9090AY.440.000548
ORF1ab/nsp15A1-B128D128YGatTat8787AY.1020.002307
ORF1ab/nsp15A1-B128D128AgAtgCt7777AH.20.927711
ORF1ab/nsp15A1-B128D128HGatCat7474All0.000014
ORF1ab/nsp15A1-B128D128NGatAat6868AY.430.000301
ORF1ab/nsp15A1-B128D128HGatCat6262AY.690.011574
ORF1ab/nsp15A1-B128D128YGatTat6161AY.1030.000379
ORF1ab/nsp15A1-B128D128YGatTat5656AY.430.000248
ORF1ab/nsp15A1-B128D128YGatTat5555B.1.20.000484
ORF1ab/nsp15A1-B128D128YGatTat5353A.150.84127
ORF1ab/nsp15A1-B128D128YGatTat5252B.1.1.5190.002065
ORF1ab/nsp15A1-B128D128YGatTat5151AY.250.000307
ORF1ab/nsp15A1-B128D128YGatTat4747AY.440.000286
ORF1ab/nsp15A1-B128D128YGatTat4747AY.98.10.002276
ORF1ab/nsp15A1-B128D128YGatTat4646AY.30.000458
ORF1ab/nsp15A1-B128D128YGatTat4646AY.34.10.023457
ORF1ab/nsp15A1-B128D128YGatTat4545P.10.000709
ORF1ab/nsp15A1-B128D128delGAT---4444B.1.1.70.000039
ORF1ab/nsp15A1-B128D128YGatTat4242AY.460.004371
ORF1ab/nsp15A1-B128D128EgaTgaG3441B.1.1.70.00003
ORF1ab/nsp15A1-B128D128EgaTgaA741B.1.1.70.000006
ORF1ab/nsp15A1-B128D128GgAtgGt4040AY.40.000062
ORF1ab/nsp15A1-B128D128YGatTat4040B.10.000366
ORF1ab/nsp15A1-B128D128DgaTgaC3939AY.430.000173
ORF1ab/nsp15A1-B128D128GgAtgGt3838B.1.617.20.000143
ORF1ab/nsp15A1-B128D128YGatTat3636AY.46.60.002599
ORF1ab/nsp15A1-B128D128EgaTgaG3232AY.39.10.001268
ORF1ab/nsp15A1-B128D128delGAT---3030B.1.20.000264
ORF1ab/nsp15A1-B128D128GgAtgGt2828AY.250.000168
ORF1ab/nsp15A1-B128D128AgAtgCt2828B.1.1.70.000025
ORF1ab/nsp15A1-B128D128DgaTgaC2727B.1.1.70.000024
ORF1ab/nsp15A1-B128D128YGatTat2525AY.99.20.002304
ORF1ab/nsp15A1-B128D128YGatTat2525B.1.1.5260.088652
ORF1ab/nsp15A1-B128D128AgAtgCt2424B.1.1.2070.028369
ORF1ab/nsp15A1-B128D128EgaTgaG2223AY.430.000097
ORF1ab/nsp15A1-B128D128EgaTgaA123AY.430.000004
ORF1ab/nsp15A1-B128D128GgAtgGt2222AY.1030.000137
ORF1ab/nsp15A1-B128D128EgaTgaA1122AY.40.000017
ORF1ab/nsp15A1-B128D128EgaTgaG1122AY.40.000017
ORF1ab/nsp15A1-B128D128YGatTat2222AY.90.001487
ORF1ab/nsp15A1-B128D128YGatTat2121B.1.621.10.010622
ORF1ab/nsp15A1-B128D128DgaTgaC1919AY.40.00003
ORF1ab/nsp15A1-B128D128EgaTgaA1919B.1.4270.000959
ORF1ab/nsp15A1-B128D128YGatTat1717AY.1050.010932
ORF1ab/nsp15A1-B128D128NGatAat1717B.10.000156
ORF1ab/nsp15A1-B128D128DgaTgaC1717B.1.1.4320.021519
ORF1ab/nsp15A1-B128D128YGatTat1616B.1.4290.000376
ORF1ab/nsp15A1-B128D128YGatTat1515AY.600.014071
ORF1ab/nsp15A1-B128D128YGatTat1414AY.390.000346
ORF1ab/nsp15A1-B128D128YGatTat1414B.1.10.000254
ORF1ab/nsp15A1-B128D128EgaTgaG1414B.1.617.20.000053
ORF1ab/nsp15A1-B128D128EgaTgaG1414B.1.6370.001023
ORF1ab/nsp15A1-B128D128YGatTat1414R.10.00126
ORF1ab/nsp15A1-B128D128DgaTgaC1313AY.1030.000081
ORF1ab/nsp15A1-B128D128YGatTat1313AY.260.000368
ORF1ab/nsp15A1-B128D128DgaTgaC1313AY.440.000079
ORF1ab/nsp15A1-B128D128YGatTat1313B.1.1.3480.01035
ORF1ab/nsp15A1-B128D128YGatTat1212A.10.003382
ORF1ab/nsp15A1-B128D128YGatTat1212AY.300.004749
ORF1ab/nsp15A1-B128D128YGatTat1212P.1.140.000574
ORF1ab/nsp15A1-B128D128VgAtgTt811All0.000002
ORF1ab/nsp15A1-B128D128VgATgTA311All0.000001
ORF1ab/nsp15A1-B128D128GgAtgGt1010AY.360.001482
ORF1ab/nsp15A1-B128D128GgAtgGt1010AY.540.000953
ORF1ab/nsp15A1-B128D128GgAtgGt1010B.1.10.000181
ORF1ab/nsp15A1-B128D128YGatTat1010B.1.1770.000132
ORF1ab/nsp15A1-B128D128YGatTat99AY.420.000362
ORF1ab/nsp15A1-B128D128DgaTgaC99AY.50.000186
ORF1ab/nsp15A1-B128D128YGatTat99B.1.3510.000268
ORF1ab/nsp15A1-B128D128YGatTat99B.1.4690.032491
ORF1ab/nsp15A1-B128D128EgaTgaA99P.10.000142
ORF1ab/nsp15A1-B128D128YGatTat88B.1.1.2140.000444
ORF1ab/nsp15A1-B128D128YGatTat88B.1.36.290.004139
ORF1ab/nsp15A1-B128D128DgaTgaC88B.1.4290.000188
ORF1ab/nsp15A1-B128D128YGatTat77AY.140.000616
ORF1ab/nsp15A1-B128D128DgaTgaC77AY.240.003017
ORF1ab/nsp15A1-B128D128EgaTgaG77AY.390.000173
ORF1ab/nsp15A1-B128D128AgAtgCt77AY.40.000011
ORF1ab/nsp15A1-B128D128YGatTat77AY.4.20.000152
ORF1ab/nsp15A1-B128D128DgaTgaC77AY.400.00675
ORF1ab/nsp15A1-B128D128AgAtgCt77AY.440.000043
ORF1ab/nsp15A1-B128D128AgAtgCt77B.10.000064
ORF1ab/nsp15A1-B128D128YGatTat77B.1.1.280.002179
ORF1ab/nsp15A1-B128D128NGatAat77B.1.20.000062
ORF1ab/nsp15A1-B128D128delGAT---77B.1.617.20.000026
ORF1ab/nsp15A1-B128D128NGatAat66AY.440.000037
ORF1ab/nsp15A1-B128D128YGatTat66AY.470.000187
ORF1ab/nsp15A1-B128D128EgaTgaG46AY.50.000083
ORF1ab/nsp15A1-B128D128EgaTgaA26AY.50.000041
ORF1ab/nsp15A1-B128D128DgaTgaC66B.10.000055
ORF1ab/nsp15A1-B128D128EgaTgaG56B.10.000046
ORF1ab/nsp15A1-B128D128EgaTgaA16B.10.000009
ORF1ab/nsp15A1-B128D128YGatTat66B.1.2340.000792
ORF1ab/nsp15A1-B128D128YGatTat66B.1.2400.001293
ORF1ab/nsp15A1-B128D128delGAT---66B.1.3510.000178
ORF1ab/nsp15A1-B128D128YGatTat66B.1.466.20.002347
ORF1ab/nsp15A1-B128D128YGatTat66B.1.6210.000531
ORF1ab/nsp15A1-B128D128YGatTat66C.370.000696
ORF1ab/nsp15A1-B128D128GgAtgGt66P.20.00112
ORF1ab/nsp15A1-B128D128del1Gat-at35All0.000001
ORF1ab/nsp15A1-B128D128del1GaT-aC15All0
ORF1ab/nsp15A1-B128D128del1GAT-NN15All0
ORF1ab/nsp15A1-B128D128YGatTat55AY.1130.000712
ORF1ab/nsp15A1-B128D128YGatTat55AY.200.000194
ORF1ab/nsp15A1-B128D128YGatTat55AY.290.000079
ORF1ab/nsp15A1-B128D128AgAtgCt55AY.39.20.007704
ORF1ab/nsp15A1-B128D128GgAtgGt55AY.570.003281
ORF1ab/nsp15A1-B128D128YGatTat55AY.75.10.000902
ORF1ab/nsp15A1-B128D128YGatTat55AY.9.20.000184
ORF1ab/nsp15A1-B128D128GgAtgGt55B.10.000046
ORF1ab/nsp15A1-B128D128delGAT---55B.10.000046
ORF1ab/nsp15A1-B128D128AgAtgCt55B.1.1.2410.010352
ORF1ab/nsp15A1-B128D128GgAtgGt55B.1.1.5190.000199
ORF1ab/nsp15A1-B128D128NGatAat55B.1.1.70.000004
ORF1ab/nsp15A1-B128D128YGatTat55B.1.1.700.001705
ORF1ab/nsp15A1-B128D128EgaTgaG55B.1.1600.000156
ORF1ab/nsp15A1-B128D128AgAtgCt55B.1.1770.000066
ORF1ab/nsp15A1-B128D128YGatTat55B.1.177.550.011655
ORF1ab/nsp15A1-B128D128GgAtgGt55B.1.4290.000118
ORF1ab/nsp15A1-B128D128YGatTat55B.1.5260.000118
ORF1ab/nsp15A1-B128D128delGAT---55B.1.5260.000118
ORF1ab/nsp15A1-B128D128delGAT---440.222222
ORF1ab/nsp15A1-B128D128GgAtgGt44AY.1000.000184
ORF1ab/nsp15A1-B128D128YGatTat44AY.1210.000541
ORF1ab/nsp15A1-B128D128GgAtgGt44AY.290.000063
ORF1ab/nsp15A1-B128D128delGAT---44AY.430.000018
ORF1ab/nsp15A1-B128D128GgAtgGt44AY.430.000018
ORF1ab/nsp15A1-B128D128EgaTgaA34AY.440.000018
ORF1ab/nsp15A1-B128D128EgaTgaG14AY.440.000006
ORF1ab/nsp15A1-B128D128YGatTat44AY.450.000487
ORF1ab/nsp15A1-B128D128EgaTgaG44AY.60.000165
ORF1ab/nsp15A1-B128D128YGatTat44AY.920.001149
ORF1ab/nsp15A1-B128D128EgaTgaG44B.1.1770.000053
ORF1ab/nsp15A1-B128D128DgaTgaC44B.1.1770.000053
ORF1ab/nsp15A1-B128D128NGatAat44B.1.1770.000053
ORF1ab/nsp15A1-B128D128YGatTat44B.1.2580.000266
ORF1ab/nsp15A1-B128D128DgaTgaC44B.1.351.20.00121
ORF1ab/nsp15A1-B128D128DgaTgaC44B.1.36.180.001681
ORF1ab/nsp15A1-B128D128EgaTgaA44C.360.003643
ORF1ab/nsp15A1-B128D128DgaTgaC44P.20.000747
ORF1ab/nsp15A1-B128D128YGatTat33AY.100.00159
ORF1ab/nsp15A1-B128D128EgaTgaG23AY.1020.000053
ORF1ab/nsp15A1-B128D128EgaTgaA13AY.1020.000027
ORF1ab/nsp15A1-B128D128AgAtgCt33AY.1090.002219
ORF1ab/nsp15A1-B128D128GgAtgGt33AY.1190.000106
ORF1ab/nsp15A1-B128D128YGatTat33AY.1190.000106
ORF1ab/nsp15A1-B128D128EgaTgaG33AY.1190.000106
ORF1ab/nsp15A1-B128D128delGAT---33AY.1210.000406
ORF1ab/nsp15A1-B128D128delGAT---33AY.30.00003
ORF1ab/nsp15A1-B128D128NGatAat33AY.40.000005
ORF1ab/nsp15A1-B128D128EgaTgaG33AY.450.000365
ORF1ab/nsp15A1-B128D128YGatTat33AY.46.40.000494
ORF1ab/nsp15A1-B128D128GgAtgGt33AY.5.30.001012
ORF1ab/nsp15A1-B128D128YGatTat33AY.60.000123
ORF1ab/nsp15A1-B128D128YGatTat33AY.610.000314
ORF1ab/nsp15A1-B128D128YGatTat33AY.7.10.000338
ORF1ab/nsp15A1-B128D128GgAtgGt33AY.840.001312
ORF1ab/nsp15A1-B128D128EgaTgaG33AY.90.000203
ORF1ab/nsp15A1-B128D128EgaTgaA23B.1.10.000036
ORF1ab/nsp15A1-B128D128EgaTgaG13B.1.10.000018
ORF1ab/nsp15A1-B128D128YGatTat33B.1.1.1350.014085
ORF1ab/nsp15A1-B128D128NGatAat33B.1.1.4120.022901
ORF1ab/nsp15A1-B128D128GgAtgGt33B.1.1.5260.010638
ORF1ab/nsp15A1-B128D128YGatTat33B.1.177.860.00055
ORF1ab/nsp15A1-B128D128YGatTat33B.1.1890.012876
ORF1ab/nsp15A1-B128D128DgaTgaC33B.1.20.000026
ORF1ab/nsp15A1-B128D128del1GAT-NN13B.1.20.000009
ORF1ab/nsp15A1-B128D128del1GaT-aC13B.1.20.000009
ORF1ab/nsp15A1-B128D128del1Gat-at13B.1.20.000009
ORF1ab/nsp15A1-B128D128AgAtgCt33B.1.3510.000089
ORF1ab/nsp15A1-B128D128YGatTat33B.1.3590.068182
ORF1ab/nsp15A1-B128D128YGatTat33B.1.360.000438
ORF1ab/nsp15A1-B128D128YGatTat33B.1.3750.002459
ORF1ab/nsp15A1-B128D128delGAT---33B.1.4290.000071
ORF1ab/nsp15A1-B128D128YGatTat33B.1.5960.000261
ORF1ab/nsp15A1-B128D128delGAT---33B.1.5960.000261
ORF1ab/nsp15A1-B128D128NGatAat33B.1.617.20.000011
ORF1ab/nsp15A1-B128D128GgAtgGt33D.20.000225
ORF1ab/nsp15A1-B128D128YGatTat33D.20.000225
ORF1ab/nsp15A1-B128D128EgaTgaA23D.20.00015
ORF1ab/nsp15A1-B128D128EgaTgaG13D.20.000075
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.1020.000053
ORF1ab/nsp15A1-B128D128EgaTgaG22AY.1030.000012
ORF1ab/nsp15A1-B128D128YGatTat22AY.1060.00067
ORF1ab/nsp15A1-B128D128YGatTat22AY.1170.000169
ORF1ab/nsp15A1-B128D128delGAT---22AY.1200.000074
ORF1ab/nsp15A1-B128D128NGatAat22AY.1200.000074
ORF1ab/nsp15A1-B128D128EgaTgaG22AY.16.10.00094
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.200.000078
ORF1ab/nsp15A1-B128D128EgaTgaG22AY.200.000078
ORF1ab/nsp15A1-B128D128DgaTgaC22AY.250.000012
ORF1ab/nsp15A1-B128D128EgaTgaG22AY.260.000057
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.260.000057
ORF1ab/nsp15A1-B128D128YGatTat22AY.280.003781
ORF1ab/nsp15A1-B128D128EgaTgaA12AY.30.00001
ORF1ab/nsp15A1-B128D128EgaTgaG12AY.30.00001
ORF1ab/nsp15A1-B128D128YGatTat22AY.330.000134
ORF1ab/nsp15A1-B128D128YGatTat22AY.360.000296
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.390.000049
ORF1ab/nsp15A1-B128D128YGatTat22AY.4.50.000215
ORF1ab/nsp15A1-B128D128delGAT---22AY.440.000012
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.460.000208
ORF1ab/nsp15A1-B128D128EgaTgaG22AY.460.000208
ORF1ab/nsp15A1-B128D128DgaTgaC22AY.46.60.000144
ORF1ab/nsp15A1-B128D128YGatTat22AY.480.00093
ORF1ab/nsp15A1-B128D128YGatTat22AY.50.000041
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.50.000041
ORF1ab/nsp15A1-B128D128YGatTat22AY.5.30.000675
ORF1ab/nsp15A1-B128D128YGatTat22AY.5.40.000553
ORF1ab/nsp15A1-B128D128DgaTgaC22AY.540.000191
ORF1ab/nsp15A1-B128D128YGatTat22AY.620.000871
ORF1ab/nsp15A1-B128D128EgaTgaG22AY.7.10.000225
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.750.000112
ORF1ab/nsp15A1-B128D128YGatTat22AY.750.000112
ORF1ab/nsp15A1-B128D128YGatTat22AY.840.000875
ORF1ab/nsp15A1-B128D128NGatAat22AY.90.000135
ORF1ab/nsp15A1-B128D128YGatTat22AY.9.10.000167
ORF1ab/nsp15A1-B128D128GgAtgGt22AY.920.000575
ORF1ab/nsp15A1-B128D128DgaTgaC22B0.000256
ORF1ab/nsp15A1-B128D128DgaTgaC22B.1.10.000036
ORF1ab/nsp15A1-B128D128VgATgTA22B.1.10.000036
ORF1ab/nsp15A1-B128D128delGAT---22B.1.10.000036
ORF1ab/nsp15A1-B128D128NGatAat12B.1.10.000018
ORF1ab/nsp15A1-B128D128NGaTAaC12B.1.10.000018
ORF1ab/nsp15A1-B128D128EgaTgaA22B.1.1.250.001137
ORF1ab/nsp15A1-B128D128YGatTat22B.1.1.3170.000823
ORF1ab/nsp15A1-B128D128HGatCat22B.1.1.70.000002
ORF1ab/nsp15A1-B128D128YGatTat22B.1.1110.00235
ORF1ab/nsp15A1-B128D128AgAtgCt22B.1.177.40.000422
ORF1ab/nsp15A1-B128D128YGatTat22B.1.177.730.001133
ORF1ab/nsp15A1-B128D128GgAtgGt22B.1.177.750.002081
ORF1ab/nsp15A1-B128D128DgaTgaC22B.1.177.810.000379
ORF1ab/nsp15A1-B128D128AgAtgCt22B.1.20.000018
ORF1ab/nsp15A1-B128D128YGatTat22B.1.221.30.001667
ORF1ab/nsp15A1-B128D128GgAtgGt22B.1.2340.000264
ORF1ab/nsp15A1-B128D128HGatCat22B.1.2430.000139
ORF1ab/nsp15A1-B128D128delGAT---22B.1.2580.000133
ORF1ab/nsp15A1-B128D128DgaTgaC22B.1.3510.000059
ORF1ab/nsp15A1-B128D128YGatTat22B.1.36.190.018519
ORF1ab/nsp15A1-B128D128GgAtgGt22B.1.4270.000101
ORF1ab/nsp15A1-B128D128AgAtgCt22B.1.4270.000101
ORF1ab/nsp15A1-B128D128YGatTat22B.1.4620.014493
ORF1ab/nsp15A1-B128D128YGatTat22B.1.4660.046512
ORF1ab/nsp15A1-B128D128GgAtgGt22B.1.466.20.000782
ORF1ab/nsp15A1-B128D128GgAtgGt22B.1.4970.00063
ORF1ab/nsp15A1-B128D128delGAT---22B.1.5170.000854
ORF1ab/nsp15A1-B128D128AgAtgCt22B.1.5510.002581
ORF1ab/nsp15A1-B128D128DgaTgaC22B.1.5610.000794
ORF1ab/nsp15A1-B128D128YGatTat22B.1.9.50.011364
ORF1ab/nsp15A1-B128D128NGatAat22D.20.00015
ORF1ab/nsp15A1-B128D128DgaTgaC22P.10.000032
ORF1ab/nsp15A1-B128D128YGatTat22P.1.150.000465
ORF1ab/nsp15A1-B128D128YGatTat22Q.40.00091
ORF1ab/nsp15A1-B128D128YGatTat11A.2.50.000499
ORF1ab/nsp15A1-B128D128EgaTgaA11A.30.002096
ORF1ab/nsp15A1-B128D128DgaTgaC11AE.80.000489
ORF1ab/nsp15A1-B128D128del2GAT--N11All0
ORF1ab/nsp15A1-B128D128XGaTTaA11All0
ORF1ab/nsp15A1-B128D128YGatTat11AY.10.000396
ORF1ab/nsp15A1-B128D128delGAT---11AY.1000.000046
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.1000.000046
ORF1ab/nsp15A1-B128D128YGatTat11AY.1000.000046
ORF1ab/nsp15A1-B128D128NGatAat11AY.1020.000027
ORF1ab/nsp15A1-B128D128NGatAat11AY.1030.000006
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.1050.000643
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.1060.000335
ORF1ab/nsp15A1-B128D128delGAT---11AY.1070.000466
ORF1ab/nsp15A1-B128D128YGatTat11AY.1070.000466
ORF1ab/nsp15A1-B128D128delGAT---11AY.1080.001103
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.1100.000113
ORF1ab/nsp15A1-B128D128YGatTat11AY.1100.000113
ORF1ab/nsp15A1-B128D128YGatTat11AY.1110.000183
ORF1ab/nsp15A1-B128D128delGAT---11AY.1130.000142
ORF1ab/nsp15A1-B128D128YGatTat11AY.1160.000287
ORF1ab/nsp15A1-B128D128YGatTat11AY.116.10.000311
ORF1ab/nsp15A1-B128D128YGatTat11AY.1180.000063
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.1190.000035
ORF1ab/nsp15A1-B128D128AgAtgCt11AY.1190.000035
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.1200.000037
ORF1ab/nsp15A1-B128D128YGatTat11AY.120.10.000321
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.120.20.001285
ORF1ab/nsp15A1-B128D128YGatTat11AY.130.000161
ORF1ab/nsp15A1-B128D128VgAtgTt11AY.16.10.00047
ORF1ab/nsp15A1-B128D128YGatTat11AY.190.00114
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.190.00114
ORF1ab/nsp15A1-B128D128NGatAat11AY.200.000039
ORF1ab/nsp15A1-B128D128NGatAat11AY.230.00007
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.230.00007
ORF1ab/nsp15A1-B128D128AgAtgCt11AY.250.000006
ORF1ab/nsp15A1-B128D128delGAT---11AY.250.000006
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.260.000028
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.270.000065
ORF1ab/nsp15A1-B128D128delGAT---11AY.290.000016
ORF1ab/nsp15A1-B128D128NGatAat11AY.30.00001
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.3.10.000085
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.3.10.000085
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.330.000067
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.340.000097
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.340.000097
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.340.000097
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.34.10.00051
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.380.000499
ORF1ab/nsp15A1-B128D128HGatCat11AY.390.000025
ORF1ab/nsp15A1-B128D128VgAtgTt11AY.40.000002
ORF1ab/nsp15A1-B128D128HGatCat11AY.40.000002
ORF1ab/nsp15A1-B128D128YGatTat11AY.4.10.000737
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.4.20.000022
ORF1ab/nsp15A1-B128D128YGatTat11AY.4.40.000409
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.420.00004
ORF1ab/nsp15A1-B128D128AgAtgCt11AY.430.000004
ORF1ab/nsp15A1-B128D128HGatCat11AY.430.000004
ORF1ab/nsp15A1-B128D128VgAtgTt11AY.440.000006
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.450.000122
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.450.000122
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.460.000104
ORF1ab/nsp15A1-B128D128HGatCat11AY.46.40.000165
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.46.60.000072
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.470.000031
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.470.000031
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.470.000031
ORF1ab/nsp15A1-B128D128delGAT---11AY.50.000021
ORF1ab/nsp15A1-B128D128NGatAat11AY.50.000021
ORF1ab/nsp15A1-B128D128YGatTat11AY.530.000288
ORF1ab/nsp15A1-B128D128delGAT---11AY.550.000917
ORF1ab/nsp15A1-B128D128YGatTat11AY.550.000917
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.600.000938
ORF1ab/nsp15A1-B128D128YGatTat11AY.670.000464
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.690.000187
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.70.000196
ORF1ab/nsp15A1-B128D128YGatTat11AY.7.20.000559
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.700.000209
ORF1ab/nsp15A1-B128D128YGatTat11AY.700.000209
ORF1ab/nsp15A1-B128D128YGatTat11AY.730.000665
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.80.000606
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.800.001129
ORF1ab/nsp15A1-B128D128delGAT---11AY.840.000437
ORF1ab/nsp15A1-B128D128GgAtgGt11AY.850.000427
ORF1ab/nsp15A1-B128D128YGatTat11AY.860.00083
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.9.20.000037
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.900.000684
ORF1ab/nsp15A1-B128D128YGatTat11AY.900.000684
ORF1ab/nsp15A1-B128D128delGAT---11AY.910.00073
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.920.000287
ORF1ab/nsp15A1-B128D128YGatTat11AY.930.000273
ORF1ab/nsp15A1-B128D128EgaTgaG11AY.970.001701
ORF1ab/nsp15A1-B128D128YGatTat11AY.980.000079
ORF1ab/nsp15A1-B128D128DgaTgaC11AY.980.000079
ORF1ab/nsp15A1-B128D128NGatAat11AY.98.10.000048
ORF1ab/nsp15A1-B128D128delGAT---11AY.990.001049
ORF1ab/nsp15A1-B128D128YGatTat11AY.990.001049
ORF1ab/nsp15A1-B128D128EgaTgaA11AY.99.20.000092
ORF1ab/nsp15A1-B128D128YGatTat11AZ.20.000821
ORF1ab/nsp15A1-B128D128delGAT---11AZ.20.000821
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.10.000018
ORF1ab/nsp15A1-B128D128del1Gat-at11B.1.10.000018
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.10.000327
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.1.10.000327
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.1010.01
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.1.1610.003534
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.1.1630.007634
ORF1ab/nsp15A1-B128D128delGAT---11B.1.1.1740.003378
ORF1ab/nsp15A1-B128D128delGAT---11B.1.1.2070.001182
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2200.001859
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2220.000204
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2530.002506
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2630.001558
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.270.00565
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2770.000759
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.1.280.000311
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2840.000107
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.2860.002899
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.3120.001912
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.1.3180.000302
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.3260.001761
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.3980.003226
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.1.4040.015873
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.1.4170.002703
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.4170.002703
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.1.4200.001006
ORF1ab/nsp15A1-B128D128EgaTgaA11B.1.1.4340.000349
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.1.500.000679
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.540.003021
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.630.000386
ORF1ab/nsp15A1-B128D128del2GAT--N11B.1.1.70.000001
ORF1ab/nsp15A1-B128D128XGaTTaA11B.1.1.70.000001
ORF1ab/nsp15A1-B128D128delGAT---11B.1.1.700.000341
ORF1ab/nsp15A1-B128D128YGatTat11B.1.1.980.018519
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.1110.001175
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.1490.003425
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.160.240.004425
ORF1ab/nsp15A1-B128D128HGatCat11B.1.1770.000013
ORF1ab/nsp15A1-B128D128VgAtgTt11B.1.1770.000013
ORF1ab/nsp15A1-B128D128YGatTat11B.1.177.160.000664
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.177.210.000076
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.177.260.006993
ORF1ab/nsp15A1-B128D128YGatTat11B.1.177.40.000211
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.177.600.000218
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.177.650.000665
ORF1ab/nsp15A1-B128D128YGatTat11B.1.177.70.000165
ORF1ab/nsp15A1-B128D128delGAT---11B.1.1790.003759
ORF1ab/nsp15A1-B128D128HGatCat11B.1.20.000009
ORF1ab/nsp15A1-B128D128VgAtgTt11B.1.20.000009
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2060.000816
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2100.002132
ORF1ab/nsp15A1-B128D128YGatTat11B.1.220.001318
ORF1ab/nsp15A1-B128D128del1Gat-at11B.1.2210.000071
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.2210.000071
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.2210.000071
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2230.002778
ORF1ab/nsp15A1-B128D128delGAT---11B.1.2340.000132
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2430.00007
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.2580.000067
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.258.170.000104
ORF1ab/nsp15A1-B128D128YGatTat11B.1.2800.007143
ORF1ab/nsp15A1-B128D128YGatTat11B.1.3110.000275
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.3320.003497
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.3510.00003
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.3510.00003
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.351.30.000876
ORF1ab/nsp15A1-B128D128YGatTat11B.1.36.360.000602
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.36.90.003215
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.3630.012987
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.400.10.015152
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4110.003704
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4160.001269
ORF1ab/nsp15A1-B128D128delGAT---11B.1.416.10.001563
ORF1ab/nsp15A1-B128D128delGAT---11B.1.4270.00005
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4270.00005
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4280.00102
ORF1ab/nsp15A1-B128D128YGatTat11B.1.4590.004082
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.4970.000315
ORF1ab/nsp15A1-B128D128VgATgTA11B.1.4970.000315
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.5040.03125
ORF1ab/nsp15A1-B128D128delGAT---11B.1.5150.014493
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.5170.000427
ORF1ab/nsp15A1-B128D128delGAT---11B.1.5240.001406
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.5250.000113
ORF1ab/nsp15A1-B128D128EgaTgaG11B.1.5260.000024
ORF1ab/nsp15A1-B128D128YGatTat11B.1.5300.007143
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.5350.028571
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.5380.008065
ORF1ab/nsp15A1-B128D128YGatTat11B.1.5600.00463
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.5640.000426
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.564.10.001577
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.5750.000303
ORF1ab/nsp15A1-B128D128delGAT---11B.1.5770.000687
ORF1ab/nsp15A1-B128D128YGatTat11B.1.5870.001898
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.5960.000087
ORF1ab/nsp15A1-B128D128YGatTat11B.1.6090.000479
ORF1ab/nsp15A1-B128D128NGatAat11B.1.6120.002653
ORF1ab/nsp15A1-B128D128VgAtgTt11B.1.617.10.000129
ORF1ab/nsp15A1-B128D128YGatTat11B.1.617.10.000129
ORF1ab/nsp15A1-B128D128AgAtgCt11B.1.617.20.000004
ORF1ab/nsp15A1-B128D128HGatCat11B.1.617.20.000004
ORF1ab/nsp15A1-B128D128VgAtgTt11B.1.617.20.000004
ORF1ab/nsp15A1-B128D128VgAtgTt11B.1.617.30.002985
ORF1ab/nsp15A1-B128D128YGatTat11B.1.6200.000946
ORF1ab/nsp15A1-B128D128delGAT---11B.1.6200.000946
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.621.10.000506
ORF1ab/nsp15A1-B128D128GgAtgGt11B.1.6250.002353
ORF1ab/nsp15A1-B128D128EgaTgaA11B.1.6270.00202
ORF1ab/nsp15A1-B128D128DgaTgaC11B.1.830.015385
ORF1ab/nsp15A1-B128D128YGatTat11B.30.000831
ORF1ab/nsp15A1-B128D128YGatTat11B.3.10.001658
ORF1ab/nsp15A1-B128D128EgaTgaG11B.550.00295
ORF1ab/nsp15A1-B128D128YGatTat11B.6.20.0625
ORF1ab/nsp15A1-B128D128GgAtgGt11C.160.00106
ORF1ab/nsp15A1-B128D128DgaTgaC11D.20.000075
ORF1ab/nsp15A1-B128D128HGatCat11D.20.000075
ORF1ab/nsp15A1-B128D128AgAtgCt11P.10.000016
ORF1ab/nsp15A1-B128D128GgAtgGt11P.10.000016
ORF1ab/nsp15A1-B128D128NGatAat11P.10.000016
ORF1ab/nsp15A1-B128D128EgaTgaA11P.1.110.010204
ORF1ab/nsp15A1-B128D128EgaTgaA11P.1.140.000048
ORF1ab/nsp15A1-B128D128delGAT---11P.1.150.000232
ORF1ab/nsp15A1-B128D128delGAT---11P.20.000187
ORF1ab/nsp15A1-B128D128DgaTgaC11P.40.003802
ORF1ab/nsp15A1-B128D128GgAtgGt11Q.80.000165
ORF1ab/nsp15A1-B128D128delGAT---11Q.80.000165
ORF1ab/nsp15A1-B128D128GgAtgGt11R.10.00009