CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 121 | V121V | V6573V | syn | gtC | gtT | 22311 | 22208 | 0.995383 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121V | V6573V | syn | gtC | gtA | 22311 | 98 | 0.00439245 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121V | V6573V | syn | gtC | gtG | 22311 | 5 | 0.000224105 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121I | V6573I | nonsyn | Gtc | Atc | 866 | 864 | 0.997691 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121I | V6573I | nonsyn | GtC | AtT | 866 | 1 | 0.00115473 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121I | V6573I | nonsyn | GtC | AtA | 866 | 1 | 0.00115473 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del | V6573del | del | GTC | --- | 176 | 176 | 1 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121A | V6573A | nonsyn | gTc | gCc | 33 | 26 | 0.787879 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121A | V6573A | nonsyn | gTC | gCT | 33 | 4 | 0.121212 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121A | V6573A | nonsyn | gTC | gCA | 33 | 2 | 0.0606061 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121A | V6573A | nonsyn | gTC | gCG | 33 | 1 | 0.030303 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del1 | V6573del1 | del | gtC | gt- | 30 | 28 | 0.933333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del1 | V6573del1 | del | GTC | -NN | 30 | 1 | 0.0333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del1 | V6573del1 | del | GtC | -tN | 30 | 1 | 0.0333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121F | V6573F | nonsyn | Gtc | Ttc | 24 | 16 | 0.666667 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121F | V6573F | nonsyn | GtC | TtT | 24 | 8 | 0.333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121L | V6573L | nonsyn | Gtc | Ctc | 13 | 9 | 0.692308 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121L | V6573L | nonsyn | GtC | CtT | 13 | 3 | 0.230769 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121L | V6573L | nonsyn | GtC | CtG | 13 | 1 | 0.0769231 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121D | V6573D | nonsyn | gTc | gAc | 7 | 7 | 1 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121N | V6573N | nonsyn | GTc | AAc | 3 | 3 | 1 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121P | V6573P | nonsyn | GTc | CCc | 3 | 2 | 0.666667 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121G | V6573G | nonsyn | gTC | gGT | 3 | 2 | 0.666667 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del2 | V6573del2 | del | GTc | --c | 3 | 1 | 0.333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121P | V6573P | nonsyn | GTC | CCG | 3 | 1 | 0.333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121G | V6573G | nonsyn | gTc | gGc | 3 | 1 | 0.333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del2 | V6573del2 | del | gTC | g-- | 3 | 1 | 0.333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121del2 | V6573del2 | del | GTC | --N | 3 | 1 | 0.333333 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121H | V6573H | nonsyn | GTc | CAc | 2 | 1 | 0.5 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121H | V6573H | nonsyn | GTC | CAT | 2 | 1 | 0.5 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121S | V6573S | nonsyn | GTc | AGc | 2 | 1 | 0.5 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121S | V6573S | nonsyn | GTC | TCT | 2 | 1 | 0.5 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121T | V6573T | nonsyn | GTc | ACc | 1 | 1 | 1 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121C | V6573C | nonsyn | GTC | TGT | 1 | 1 | 1 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121Q | V6573Q | nonsyn | GTC | CAA | 1 | 1 | 1 | 19981-19983 |
ORF1ab/nsp15A1-B | 121 | V121R | V6573R | nonsyn | GTC | CGT | 1 | 1 | 1 | 19981-19983 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 22208 | 22311 | All | 0.004248 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 98 | 22311 | All | 0.000019 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtG | 5 | 22311 | All | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3383 | 3395 | B.1.1.7 | 0.003029 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 12 | 3395 | B.1.1.7 | 0.000011 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3149 | 3159 | AY.4 | 0.004901 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 10 | 3159 | AY.4 | 0.000016 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2874 | 2874 | AY.12 | 0.908344 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1653 | 1655 | B.1.617.2 | 0.006224 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 2 | 1655 | B.1.617.2 | 0.000008 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1021 | 1021 | AY.44 | 0.006215 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 864 | 866 | All | 0.000165 |
ORF1ab/nsp15A1-B | 121 | V121I | GtC | AtA | 1 | 866 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121I | GtC | AtT | 1 | 866 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 795 | 796 | AY.43 | 0.003522 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 796 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 777 | 777 | AY.4.2 | 0.016852 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 640 | 672 | B.1.2 | 0.005635 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 31 | 672 | B.1.2 | 0.000273 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtG | 1 | 672 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 649 | 649 | AY.3 | 0.006455 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 481 | 481 | B.1.438.1 | 0.051593 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 449 | 452 | AY.103 | 0.002788 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 3 | 452 | AY.103 | 0.000019 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 427 | 427 | AY.25 | 0.002568 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 399 | 399 | AY.46.6 | 0.028811 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 396 | 396 | AY.29 | 0.006246 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 363 | 363 | B.1.258.22 | 0.968 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 348 | 348 | B.1.427 | 0.017573 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 265 | 265 | AY.39 | 0.006549 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 206 | 206 | B.1.243 | 0.014334 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 176 | 176 | All | 0.000034 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 148 | 148 | B.1 | 0.001356 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 147 | 147 | B.1.1 | 0.002667 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 144 | 145 | B.1.177 | 0.001896 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 145 | B.1.177 | 0.000013 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 140 | 140 | AY.47 | 0.004355 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 130 | 130 | AY.99.2 | 0.01198 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 125 | 125 | P.1 | 0.001969 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 119 | 119 | AY.102 | 0.003155 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 104 | 104 | AY.6 | 0.004277 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 100 | 100 | AY.61 | 0.010478 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 97 | 97 | B.1.526 | 0.00228 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 92 | 92 | B.1.429 | 0.002165 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 91 | 91 | AY.100 | 0.004187 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 88 | 88 | B.1.36.36 | 0.05298 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 79 | 79 | AY.99 | 0.082896 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 75 | 75 | AY.5 | 0.001549 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 71 | 71 | B.1 | 0.00065 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 66 | 66 | AY.121 | 0.008931 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 56 | 56 | C.35 | 0.043344 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 54 | 54 | AY.9.2 | 0.001983 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 52 | 52 | AY.26 | 0.001472 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 50 | 50 | AY.90 | 0.034223 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 50 | 50 | B.1.36.37 | 0.138889 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 36 | 49 | R.1 | 0.00324 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 13 | 49 | R.1 | 0.00117 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 48 | 48 | AY.117 | 0.004057 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 48 | 48 | AY.33 | 0.003205 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 45 | 45 | B.1.243 | 0.003131 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 44 | 44 | AY.20 | 0.00171 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 44 | 44 | B.1.1.7 | 0.000039 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 44 | 44 | B.1.258 | 0.002928 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 43 | 44 | B.1.351 | 0.001278 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 44 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 43 | 43 | AY.119 | 0.001518 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 43 | 43 | B.1.1.28 | 0.013383 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 41 | 41 | B.1.160 | 0.001279 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 41 | 41 | D.2 | 0.003077 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 39 | 39 | AY.120 | 0.00145 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 39 | 39 | AY.84 | 0.01706 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 38 | 38 | B.1.221 | 0.002699 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 37 | 37 | AY.42 | 0.001489 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 37 | 37 | B.1.1.7 | 0.000033 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 37 | 37 | B.1.2 | 0.000326 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 35 | 37 | B.1.617.1 | 0.004514 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 2 | 37 | B.1.617.1 | 0.000258 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 30 | 36 | AY.39.1 | 0.001188 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 6 | 36 | AY.39.1 | 0.000238 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 36 | 36 | AY.98 | 0.002844 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 35 | 35 | AY.116 | 0.010037 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 26 | 33 | All | 0.000005 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCT | 4 | 33 | All | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCA | 2 | 33 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCG | 1 | 33 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 33 | 33 | AY.111 | 0.006044 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 33 | 33 | AY.46 | 0.003435 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 33 | 33 | C.9 | 1 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 32 | 32 | B.1.2 | 0.000282 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 31 | 31 | AY.118 | 0.001942 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 31 | 31 | B.1.621 | 0.002744 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 28 | 30 | All | 0.000005 |
ORF1ab/nsp15A1-B | 121 | V121del1 | GtC | -tN | 1 | 30 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121del1 | GTC | -NN | 1 | 30 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 28 | 29 | AY.23 | 0.001953 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 29 | AY.23 | 0.00007 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 28 | 29 | AY.36 | 0.00415 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 29 | AY.36 | 0.000148 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 29 | 29 | B.1.258.17 | 0.003015 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 28 | 28 | AY.3.1 | 0.002387 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 27 | 27 | B.1.1.214 | 0.001497 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 26 | 26 | AY.13 | 0.004185 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 25 | 25 | AY.54 | 0.002384 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 25 | 25 | B.1.1.519 | 0.000993 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 16 | 24 | All | 0.000003 |
ORF1ab/nsp15A1-B | 121 | V121F | GtC | TtT | 8 | 24 | All | 0.000002 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 24 | 24 | AY.64 | 0.014286 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 24 | 24 | AY.98.1 | 0.001162 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 23 | 23 | AY.11 | 0.03079 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 22 | 22 | AY.116.1 | 0.006851 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 22 | 22 | AY.45 | 0.002677 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 21 | 21 | AY.75.1 | 0.003787 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 16 | 21 | AY.85 | 0.006835 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 5 | 21 | AY.85 | 0.002136 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 20 | 20 | AY.75 | 0.00112 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 20 | 20 | AY.9.1 | 0.001674 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 20 | 20 | AY.94 | 0.008853 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 19 | 19 | A.5 | 0.036538 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 19 | 19 | AY.9 | 0.001284 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | AY.92 | 0.005171 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | B.1.1.33 | 0.007576 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | B.1.160.29 | 0.075949 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | B.1.177.12 | 0.002731 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | B.1.177.81 | 0.003408 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | B.1.234 | 0.002375 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 18 | 18 | C.37 | 0.002089 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 17 | 17 | B.1.243.2 | 0.246377 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 17 | 17 | B.1.596 | 0.001481 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 16 | 16 | AY.41 | 0.004703 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 16 | 16 | AY.42 | 0.000644 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 16 | 16 | AY.74 | 0.00185 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 16 | 16 | B.1.1.244 | 0.246154 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 15 | 15 | AY.4.5 | 0.001612 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 15 | 15 | AY.69 | 0.0028 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 15 | 15 | B.1.110.3 | 0.010776 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 14 | 14 | AY.27 | 0.000906 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 12 | 14 | AY.46.4 | 0.001974 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtG | 2 | 14 | AY.46.4 | 0.000329 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 14 | 14 | P.1.15 | 0.003253 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 9 | 13 | All | 0.000002 |
ORF1ab/nsp15A1-B | 121 | V121L | GtC | CtT | 3 | 13 | All | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121L | GtC | CtG | 1 | 13 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 13 | 13 | P.1.10 | 0.003503 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 12 | 12 | AY.16.1 | 0.005639 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 12 | 12 | B.1.351.5 | 0.007194 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 12 | 12 | B.1.409 | 0.009375 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 11 | AY.113 | 0.001282 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 11 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtG | 1 | 11 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 11 | 11 | AY.34.1 | 0.005609 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 11 | 11 | AY.46.6 | 0.000794 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 11 | 11 | B.1.637 | 0.000804 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 10 | 10 | AY.34 | 0.00097 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 10 | 10 | AY.93 | 0.002731 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 10 | 10 | B.1.617.2 | 0.000038 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | A | 0.003483 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | A.2.5 | 0.004491 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | AY.14 | 0.000792 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | AY.5.3 | 0.003036 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | AY.55 | 0.008257 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | AY.7.1 | 0.001014 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | B.1.1.153 | 0.009858 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | B.1.1.50 | 0.00611 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 7 | 9 | B.1.1.7 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121del1 | GTC | -NN | 1 | 9 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121del1 | GtC | -tN | 1 | 9 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | B.1.214.3 | 0.064286 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | B.1.543 | 0.09 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | B.1.582 | 0.004416 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 9 | 9 | B.40 | 0.003279 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | AY.106 | 0.002679 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | AY.4.2.1 | 0.001192 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | AY.65 | 0.004264 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | B.1.1.132 | 0.119403 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | B.1.1.285 | 0.052288 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | B.1.1.374 | 0.019002 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 8 | 8 | B.1.36 | 0.001167 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | AD.2 | 0.001533 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 7 | 7 | All | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | AY.114 | 0.001618 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | AY.29.1 | 0.001544 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 6 | 7 | AY.3 | 0.00006 |
ORF1ab/nsp15A1-B | 121 | V121I | GtC | AtT | 1 | 7 | AY.3 | 0.00001 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 6 | 7 | AY.4 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121F | GtC | TtT | 1 | 7 | AY.4 | 0.000002 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | AY.4.4 | 0.002864 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 7 | 7 | AY.44 | 0.000043 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | AY.7.2 | 0.003915 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | B.1.1.25 | 0.00398 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | B.1.336 | 0.017073 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 6 | 7 | B.1.351.2 | 0.001815 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 7 | B.1.351.2 | 0.000303 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | C.36.3 | 0.003971 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | P.1.7 | 0.002235 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 7 | 7 | Q.4 | 0.003183 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 6 | 6 | AY.25 | 0.000036 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 6 | B.1.1.1 | 0.001633 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 6 | B.1.1.1 | 0.000327 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 6 | 6 | B.1.1.298 | 0.005172 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 6 | 6 | B.1.210 | 0.012793 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 6 | 6 | P.1.4 | 0.005859 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | AY.105 | 0.003215 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | AY.110 | 0.000563 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 5 | 5 | AY.46.4 | 0.000823 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | AY.62 | 0.002179 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | AY.67 | 0.002321 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | AY.87 | 0.004163 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | AY.95 | 0.003805 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 4 | 5 | B.1 | 0.000037 |
ORF1ab/nsp15A1-B | 121 | V121F | GtC | TtT | 1 | 5 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.1.280 | 0.015432 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.177.77 | 0.003631 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.177.86 | 0.000917 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 5 | 5 | B.1.351 | 0.000149 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.411 | 0.018519 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.499 | 0.005252 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 3 | 5 | B.1.575 | 0.00091 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 5 | B.1.575 | 0.000607 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.595 | 0.001305 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | B.1.623 | 0.002682 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | A.21 | 0.01108 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | A.23.1 | 0.002817 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | AY.109 | 0.002959 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | AY.32 | 0.00213 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | AY.37 | 0.001264 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 4 | 4 | AY.39 | 0.000099 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | AY.46.2 | 0.002541 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B | 0.000511 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.1.284 | 0.00043 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.177.15 | 0.002524 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.177.21 | 0.000306 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.265 | 0.005083 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.311 | 0.001098 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.459 | 0.016327 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | B.1.619.1 | 0.002566 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | A.2.3 | 0.014218 |
ORF1ab/nsp15A1-B | 121 | V121N | GTc | AAc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121G | gTC | gGT | 2 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121P | GTc | CCc | 2 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121del2 | GTc | --c | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121del2 | gTC | g-- | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121G | gTc | gGc | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121P | GTC | CCG | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121del2 | GTC | --N | 1 | 3 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.120.2 | 0.003856 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.21 | 0.005693 |
ORF1ab/nsp15A1-B | 121 | V121F | GtC | TtT | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.38 | 0.001498 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.39.1.1 | 0.002174 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.40 | 0.002893 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.46.3 | 0.002801 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.46.5 | 0.000595 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 3 | 3 | AY.54 | 0.000286 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.70 | 0.000626 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | AY.71 | 0.001425 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.141 | 0.006036 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.222 | 0.000612 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.311 | 0.001074 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.334 | 0.04918 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.337 | 0.010791 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.1.348 | 0.002389 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCA | 2 | 3 | B.1.1.7 | 0.000002 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.160.23 | 0.014493 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.177.75 | 0.003122 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.36.38 | 0.004926 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.416 | 0.003807 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.509 | 0.002597 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.517 | 0.001281 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.561 | 0.001191 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.580 | 0.012195 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.588 | 0.00273 |
ORF1ab/nsp15A1-B | 121 | V121F | GtC | TtT | 2 | 3 | B.1.617.2 | 0.000008 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 1 | 3 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.627 | 0.006061 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCT | 2 | 2 | 0.111111 | |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | A.27 | 0.003311 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AE.8 | 0.000978 |
ORF1ab/nsp15A1-B | 121 | V121S | GTc | AGc | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121H | GTC | CAT | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121H | GTc | CAc | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121S | GTC | TCT | 1 | 2 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121P | GTc | CCc | 1 | 2 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121P | GTC | CCG | 1 | 2 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 2 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 2 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121L | GtC | CtG | 1 | 2 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCG | 1 | 2 | AY.113 | 0.000142 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.120.2.1 | 0.000997 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.19 | 0.002281 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.28 | 0.003781 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp15A1-B | 121 | V121L | GtC | CtT | 1 | 2 | AY.4 | 0.000002 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121I | GtC | AtA | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.50 | 0.001599 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.56 | 0.00321 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.57 | 0.001312 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.76 | 0.009662 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.79 | 0.002421 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.121 | 0.004854 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.155 | 0.142857 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.186 | 0.006873 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.413 | 0.013793 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.46 | 0.008734 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.8 | 0.007168 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.89 | 0.012121 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.1.93 | 0.051282 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.128 | 0.001271 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.139 | 0.001466 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.43 | 0.002954 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.65 | 0.001331 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.67 | 0.015267 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.79 | 0.004684 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.80 | 0.003824 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.177.82 | 0.000955 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.206 | 0.001631 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 2 | B.1.240 | 0.000216 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCT | 1 | 2 | B.1.240 | 0.000216 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.320 | 0.002491 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 2 | B.1.329 | 0.000608 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 2 | B.1.329 | 0.000608 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 2 | B.1.351.3 | 0.000876 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 2 | B.1.351.3 | 0.000876 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.532 | 0.012422 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.1.618 | 0.008065 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | B.41 | 0.016 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 2 | C.36 | 0.000911 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtG | 1 | 2 | C.36 | 0.000911 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AA.1 | 0.007246 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AE.5 | 0.018519 |
ORF1ab/nsp15A1-B | 121 | V121T | GTc | ACc | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121C | GTC | TGT | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121R | GTC | CGT | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121Q | GTC | CAA | 1 | 1 | All | 0 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AM.4 | 0.003571 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp15A1-B | 121 | V121F | GtC | TtT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp15A1-B | 121 | V121Q | GTC | CAA | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121H | GTC | CAT | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121R | GTC | CGT | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp15A1-B | 121 | V121A | gTC | gCT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp15A1-B | 121 | V121P | GTc | CCc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121H | GTc | CAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121T | GTc | ACc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121N | GTc | AAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121G | gTC | gGT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121C | GTC | TGT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121N | GTc | AAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121L | GtC | CtT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.134 | 0.011364 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.196 | 0.005714 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.232 | 0.001815 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.234 | 0.012048 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.302 | 0.002075 |
ORF1ab/nsp15A1-B | 121 | V121G | gTC | gGT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.328 | 0.016949 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.396 | 0.045455 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.56 | 0.017857 |
ORF1ab/nsp15A1-B | 121 | V121del2 | gTC | g-- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121S | GTc | AGc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121N | GTc | AAc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.105 | 0.009615 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.160.25 | 0.011111 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.85 | 0.005435 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp15A1-B | 121 | V121S | GTC | TCT | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121del2 | GTc | --c | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121G | gTc | gGc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.243.1 | 0.022222 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.264.1 | 0.047619 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.273 | 0.012987 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.313 | 0.006579 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 1 | 1 | B.1.36.2 | 0.010753 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.36.37 | 0.002778 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.370 | 0.008 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp15A1-B | 121 | V121L | Gtc | Ctc | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.465 | 0.003802 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.490 | 0.1 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.501 | 0.007353 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp15A1-B | 121 | V121del2 | GTC | --N | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp15A1-B | 121 | V121del1 | gtC | gt- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121L | GtC | CtT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121A | gTc | gCc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.52 | 0.010101 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtA | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp15A1-B | 121 | V121D | gTc | gAc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 121 | V121F | Gtc | Ttc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | N.10 | 0.029412 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | P.1.11 | 0.010204 |
ORF1ab/nsp15A1-B | 121 | V121I | Gtc | Atc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp15A1-B | 121 | V121V | gtC | gtT | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp15A1-B | 121 | V121del | GTC | --- | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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