CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 12 & Codon = aaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B12K12NK6464NnonsynaaGaaT519451650.99441719654-19656

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B12K12NaaGaaT51655194All0.000988
ORF1ab/nsp15A1-B12K12NaaGaaT10431049AY.40.001623
ORF1ab/nsp15A1-B12K12NaaGaaT414414AY.30.004118
ORF1ab/nsp15A1-B12K12NaaGaaT390395B.1.1.70.000349
ORF1ab/nsp15A1-B12K12NaaGaaT273273B.1.617.20.001028
ORF1ab/nsp15A1-B12K12NaaGaaT269271AY.430.001192
ORF1ab/nsp15A1-B12K12NaaGaaT241241AY.250.00145
ORF1ab/nsp15A1-B12K12NaaGaaT207207B.1.20.001823
ORF1ab/nsp15A1-B12K12NaaGaaT114114AY.440.000694
ORF1ab/nsp15A1-B12K12NaaGaaT107108B.1.4270.005403
ORF1ab/nsp15A1-B12K12NaaGaaT100100AY.50.002065
ORF1ab/nsp15A1-B12K12NaaGaaT8484AY.46.50.016667
ORF1ab/nsp15A1-B12K12NaaGaaT8383AY.1030.000515
ORF1ab/nsp15A1-B12K12NaaGaaT7878B.1.10.001415
ORF1ab/nsp15A1-B12K12NaaGaaT6565B.1.5160.127202
ORF1ab/nsp15A1-B12K12NaaGaaT6262B.1.2580.004126
ORF1ab/nsp15A1-B12K12NaaGaaT5959AY.590.03125
ORF1ab/nsp15A1-B12K12NaaGaaT5959AY.7.10.006649
ORF1ab/nsp15A1-B12K12NaaGaaT5659B.1.5260.001316
ORF1ab/nsp15A1-B12K12NaaGaaT5355P.10.000835
ORF1ab/nsp15A1-B12K12NaaGaaT5253B.10.000476
ORF1ab/nsp15A1-B12K12NaaGaaT4848B.1.4290.001129
ORF1ab/nsp15A1-B12K12NaaGaaT4545B.1.1.2290.258621
ORF1ab/nsp15A1-B12K12NaaGaaT4141N.90.244048
ORF1ab/nsp15A1-B12K12NaaGaaT3838B.1.3510.00113
ORF1ab/nsp15A1-B12K12NaaGaaT3636AY.1020.000955
ORF1ab/nsp15A1-B12K12NaaGaaT3636B.1.1.3470.654545
ORF1ab/nsp15A1-B12K12NaaGaaT3434AY.200.001321
ORF1ab/nsp15A1-B12K12NaaGaaT3434P.1.170.0055
ORF1ab/nsp15A1-B12K12NaaGaaT3333B.1.1770.000435
ORF1ab/nsp15A1-B12K12NaaGaaT3232B.1.1260.040816
ORF1ab/nsp15A1-B12K12NaaGaaT3131C.36.30.017584
ORF1ab/nsp15A1-B12K12NaaGaaT3030AY.130.004829
ORF1ab/nsp15A1-B12K12NaaGaaT3030AY.470.000933
ORF1ab/nsp15A1-B12K12NaaGaaT3030B.1.360.004377
ORF1ab/nsp15A1-B12K12NaaGaaT2828AY.520.022801
ORF1ab/nsp15A1-B12K12NaaGaaT2525B.1.6370.001827
ORF1ab/nsp15A1-B12K12NaaGaaT2323AY.140.002024
ORF1ab/nsp15A1-B12K12NaaGaaT2323AY.390.000568
ORF1ab/nsp15A1-B12K12NaaGaaT2222B.1.1.280.006847
ORF1ab/nsp15A1-B12K12NaaGaaT2222B.1.596.10.205607
ORF1ab/nsp15A1-B12K12NaaGaaT1919AY.230.001325
ORF1ab/nsp15A1-B12K12NaaGaaT1919AY.610.001991
ORF1ab/nsp15A1-B12K12NaaGaaT1818B.1.1600.000561
ORF1ab/nsp15A1-B12K12NaaGaaT1818B.1.2210.001279
ORF1ab/nsp15A1-B12K12NaaGaaT1717B.1.177.860.003119
ORF1ab/nsp15A1-B12K12NaaGaaT1717B.1.36.360.010235
ORF1ab/nsp15A1-B12K12NaaGaaT1616AY.330.001068
ORF1ab/nsp15A1-B12K12NaaGaaT1616B.1.617.10.002063
ORF1ab/nsp15A1-B12K12NaaGaaT1415AY.260.000396
ORF1ab/nsp15A1-B12K12NaaGaaT1515P.20.0028
ORF1ab/nsp15A1-B12K12NaaGaaT1414AY.290.000221
ORF1ab/nsp15A1-B12K12NaaGaaT1414B.1.4220.011373
ORF1ab/nsp15A1-B12K12NaaGaaT1313AY.1000.000598
ORF1ab/nsp15A1-B12K12NaaGaaT1213B.1.1.5190.000477
ORF1ab/nsp15A1-B12K12NaaGaaT1212AY.3.10.001023
ORF1ab/nsp15A1-B12K12NaaGaaT1212AY.420.000483
ORF1ab/nsp15A1-B12K12NaaGaaT1111B.1.1.100.012263
ORF1ab/nsp15A1-B12K12NaaGaaT1010AY.1190.000353
ORF1ab/nsp15A1-B12K12NaaGaaT1010AY.4.20.000217
ORF1ab/nsp15A1-B12K12NaaGaaT1010B.1.177.870.007278
ORF1ab/nsp15A1-B12K12NaaGaaT99AY.1180.000564
ORF1ab/nsp15A1-B12K12NaaGaaT99AY.530.002588
ORF1ab/nsp15A1-B12K12NaaGaaT99B.1.1.700.00307
ORF1ab/nsp15A1-B12K12NaaGaaT88AY.46.30.00747
ORF1ab/nsp15A1-B12K12NaaGaaT88AY.540.000763
ORF1ab/nsp15A1-B12K12NaaGaaT88AY.750.000448
ORF1ab/nsp15A1-B12K12NaaGaaT88AY.930.002185
ORF1ab/nsp15A1-B12K12NaaGaaT88B.1.177.500.037559
ORF1ab/nsp15A1-B12K12NaaGaaT77AY.160.002658
ORF1ab/nsp15A1-B12K12NaaGaaT67AY.39.10.000238
ORF1ab/nsp15A1-B12K12NaaGaaT77B.1.1.3930.777778
ORF1ab/nsp15A1-B12K12NaaGaaT66AY.1200.000223
ORF1ab/nsp15A1-B12K12NaaGaaT66AY.60.000247
ORF1ab/nsp15A1-B12K12NaaGaaT66AY.75.10.001082
ORF1ab/nsp15A1-B12K12NaaGaaT66AY.98.10.000291
ORF1ab/nsp15A1-B12K12NaaGaaT66B.1.1.3110.002149
ORF1ab/nsp15A1-B12K12NaaGaaT66B.1.1.370.001157
ORF1ab/nsp15A1-B12K12NaaGaaT66B.1.1.4060.038961
ORF1ab/nsp15A1-B12K12NaaGaaT66B.1.6280.002114
ORF1ab/nsp15A1-B12K12NaaGaaT66P.1.70.001916
ORF1ab/nsp15A1-B12K12NaaGaaT55AD.20.001095
ORF1ab/nsp15A1-B12K12NaaGaaT55AY.1060.001674
ORF1ab/nsp15A1-B12K12NaaGaaT55AY.460.00052
ORF1ab/nsp15A1-B12K12NaaGaaT55AY.780.007704
ORF1ab/nsp15A1-B12K12NaaGaaT55B.1.1.2390.16129
ORF1ab/nsp15A1-B12K12NaaGaaT55B.1.1.3060.002192
ORF1ab/nsp15A1-B12K12NaaGaaT55B.1.3690.001426
ORF1ab/nsp15A1-B12K12NaaGaaT55B.1.5960.000436
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.1100.000451
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.116.10.001246
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.1170.000338
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.220.008368
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.360.000593
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.46.60.000289
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.570.002625
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.7.20.002237
ORF1ab/nsp15A1-B12K12NaaGaaT44AY.980.000316
ORF1ab/nsp15A1-B12K12NaaGaaT44B.1.1.3540.017544
ORF1ab/nsp15A1-B12K12NaaGaaT44B.1.2340.000528
ORF1ab/nsp15A1-B12K12NaaGaaT44B.1.258.170.000416
ORF1ab/nsp15A1-B12K12NaaGaaT44B.1.36.310.007005
ORF1ab/nsp15A1-B12K12NaaGaaT33AY.1160.00086
ORF1ab/nsp15A1-B12K12NaaGaaT33AY.300.001187
ORF1ab/nsp15A1-B12K12NaaGaaT33AY.700.000626
ORF1ab/nsp15A1-B12K12NaaGaaT33B0.000383
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.1.1980.004405
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.1.2840.000322
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.1.330.001263
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.1.830.00813
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.177.560.002003
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.2180.015464
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.2350.007557
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.2430.000209
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.243.20.043478
ORF1ab/nsp15A1-B12K12NaaGaaT13B.1.3110.000275
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.390.011719
ORF1ab/nsp15A1-B12K12NaaGaaT33B.1.6210.000266
ORF1ab/nsp15A1-B12K12NaaGaaT33C.370.000348
ORF1ab/nsp15A1-B12K12NaaGaaT33R.10.00027
ORF1ab/nsp15A1-B12K12NaaGaaT22A.10.000564
ORF1ab/nsp15A1-B12K12NaaGaaT22A.23.10.001408
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.1070.000932
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.1090.001479
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.1210.000271
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.190.002281
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.340.000194
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.510.001818
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.70.000392
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.720.002721
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.770.002255
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.790.002421
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.9.20.000073
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.920.000575
ORF1ab/nsp15A1-B12K12NaaGaaT22AY.99.20.000184
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.1.2160.001781
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.1.3160.00185
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.1.3170.000823
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.1.3330.002153
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.214.20.001199
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.2400.000431
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.2980.004228
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.3360.004878
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.36.290.001035
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.4000.000858
ORF1ab/nsp15A1-B12K12NaaGaaT22B.1.5170.000854
ORF1ab/nsp15A1-B12K12NaaGaaT22C.20.032258
ORF1ab/nsp15A1-B12K12NaaGaaT22P.1.140.000096
ORF1ab/nsp15A1-B12K12NaaGaaT22W.40.002703
ORF1ab/nsp15A1-B12K12NaaGaaT11A.2.50.000499
ORF1ab/nsp15A1-B12K12NaaGaaT11A.2.5.10.004808
ORF1ab/nsp15A1-B12K12NaaGaaT11A.280.002646
ORF1ab/nsp15A1-B12K12NaaGaaT11AT.10.005128
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.1130.000142
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.1140.000231
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.16.10.00047
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.20.000356
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.34.10.00051
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.350.000233
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.4.2.10.000149
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.4.30.000842
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.450.000122
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.5.30.000337
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.550.000917
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.560.001605
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.600.000938
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.650.000533
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.680.000274
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.710.000475
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.740.000116
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.840.000437
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.880.000884
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.9.10.000084
ORF1ab/nsp15A1-B12K12NaaGaaT11AY.99.10.001553
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.1380.006061
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.1710.003676
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.2200.001859
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.3120.001912
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.3180.000302
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.3370.003597
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.3480.000796
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.3880.045455
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.390.00051
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.3980.003226
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.4130.006897
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.4160.000905
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.4340.000349
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.4480.002033
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.480.002874
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.4870.005587
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.500.000679
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.5130.012346
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.1.80.003584
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.160.140.002119
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.160.160.000929
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.177.70.000165
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.177.810.000189
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.177.820.000477
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.221.30.000833
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3200.001245
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3430.020833
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3490.000715
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.351.30.000876
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.351.50.0006
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.36.190.009259
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.36.80.001
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3660.004878
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3710.001122
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3890.001002
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3910.001127
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.3970.004854
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.4280.00102
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.4530.003236
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.4680.005714
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.4950.009091
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5250.000113
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5280.047619
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5380.008065
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5400.009709
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5520.015152
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5610.000397
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.575.10.002439
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.5760.000907
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.6190.000871
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.6220.012987
ORF1ab/nsp15A1-B12K12NaaGaaT11B.1.780.008547
ORF1ab/nsp15A1-B12K12NaaGaaT11B.6.60.000889
ORF1ab/nsp15A1-B12K12NaaGaaT11D.20.000075
ORF1ab/nsp15A1-B12K12NaaGaaT11D.50.004975
ORF1ab/nsp15A1-B12K12NaaGaaT11P.1.100.000269
ORF1ab/nsp15A1-B12K12NaaGaaT11P.1.120.000484
ORF1ab/nsp15A1-B12K12NaaGaaT11P.1.150.000232
ORF1ab/nsp15A1-B12K12NaaGaaT11P.1.160.000374
ORF1ab/nsp15A1-B12K12NaaGaaT11P.60.003145