CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp15A1-B | 114 | T114T | T6566T | syn | acG | acT | 8500 | 4292 | 0.504941 | 19960-19962 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4292 | 8500 | All | 0.000821 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1021 | 1219 | B.1.1.7 | 0.000914 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 431 | 611 | B.1.617.2 | 0.001623 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 125 | 342 | AY.43 | 0.000554 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 215 | 282 | B.1 | 0.001969 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 234 | 251 | AY.3 | 0.002327 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 230 | 249 | AY.4 | 0.000358 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 42 | 152 | P.1 | 0.000662 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 87 | 146 | AY.44 | 0.00053 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 128 | 132 | B.1.2 | 0.001127 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 112 | 130 | AY.103 | 0.000695 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 115 | 121 | AY.102 | 0.003049 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 105 | 115 | AY.25 | 0.000632 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 109 | B.1.221 | 0.000071 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 90 | 94 | AY.33 | 0.00601 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 81 | 83 | AY.100 | 0.003727 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 80 | 80 | B.1.1.348 | 0.063694 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 67 | 67 | B.1.282 | 1 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 58 | 66 | B.1.177 | 0.000764 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 40 | 40 | B.1.177.21 | 0.003059 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 37 | 39 | B.1.258 | 0.002462 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 24 | 35 | AY.39 | 0.000593 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 35 | 35 | B.1.243.1 | 0.777778 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 33 | 34 | AY.34 | 0.0032 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 26 | 32 | AY.5 | 0.000537 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 29 | 29 | AP.1 | 0.043544 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 29 | 29 | B.1.597 | 0.134259 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 28 | 28 | AY.84 | 0.012248 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 27 | 27 | AY.9.2 | 0.000992 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 25 | B.1.1.50 | 0.000679 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 25 | B.1.621 | 0.000089 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 24 | B.1.565 | 0.00081 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 18 | 23 | B.1.1 | 0.000327 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 19 | 21 | AY.29 | 0.0003 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 16 | 21 | AY.61 | 0.001676 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 19 | 21 | B.1.429 | 0.000447 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 19 | 19 | AY.20 | 0.000738 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 19 | 19 | AY.26 | 0.000538 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 19 | 19 | B.1.1.420 | 0.019115 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 19 | 19 | C.36.3 | 0.010777 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 18 | B.1.351 | 0.000178 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 17 | 17 | AY.46.6 | 0.001228 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 17 | 17 | Q.3 | 0.002466 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 11 | 16 | AY.98.1 | 0.000533 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 16 | B.1.526 | 0.000165 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 15 | B.1.1.519 | 0.000278 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 15 | 15 | B.1.369 | 0.004278 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 14 | AY.120 | 0.000223 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 8 | 14 | P.1.14 | 0.000382 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 13 | 13 | A.23.1 | 0.009155 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 13 | 13 | AY.105 | 0.00836 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 13 | 13 | AY.110 | 0.001465 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 11 | 13 | B.1.160 | 0.000343 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 13 | 13 | B.1.177.81 | 0.002461 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 13 | 13 | B.1.36.8 | 0.013 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 11 | AY.121 | 0.000541 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 11 | 11 | AY.4.5 | 0.001182 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 11 | 11 | AY.92 | 0.00316 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 11 | 11 | B.1.617.1 | 0.001419 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 10 | 10 | AY.116 | 0.002868 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 10 | AY.117 | 0.000592 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 10 | AY.119 | 0.000071 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 9 | 10 | AY.46.4 | 0.001481 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 10 | 10 | AY.89 | 0.04902 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 10 | 10 | B.1.160.8 | 0.012887 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 8 | 10 | P.2 | 0.001493 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 9 | AY.23 | 0.000418 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 8 | 9 | AY.45 | 0.000973 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 8 | 9 | B.1.1.214 | 0.000444 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 9 | B.1.1.28 | 0.002179 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 8 | A | 0.002709 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 8 | AY.27 | 0.000453 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 8 | AY.46 | 0.00052 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 8 | 8 | AY.98 | 0.000632 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 8 | B.1.525 | 0.000113 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 7 | AY.47 | 0.000218 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 7 | 7 | AZ.2 | 0.005747 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 7 | B.1.595 | 0.001305 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 7 | B.1.596 | 0.000349 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 6 | AY.120.1 | 0.001926 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 6 | AY.29.1 | 0.001323 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 6 | AY.64 | 0.003571 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 6 | B.1.243 | 0.000348 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 6 | 6 | Q.8 | 0.000989 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 5 | AY.106 | 0.001674 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 5 | AY.108 | 0.005513 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 5 | AY.42 | 0.000121 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 5 | B.1.580 | 0.020325 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 5 | C.37 | 0.000464 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 5 | D.2 | 0.0003 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 5 | 5 | Q.1 | 0.000632 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | AY.12 | 0.001264 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 4 | AY.4.2 | 0.000065 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | AY.53 | 0.00115 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 4 | B.1.1.284 | 0.000107 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | B.1.338 | 0.034483 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | B.1.564 | 0.001704 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | L.3 | 0.014184 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | P.1.10 | 0.001078 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | A.2.5.1 | 0.014423 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | AY.16.1 | 0.00141 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | AY.34.1 | 0.00153 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 3 | AY.39.1 | 0.000079 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | AY.46.5 | 0.000595 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 3 | AY.54 | 0.000095 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 3 | AY.75 | 0.000112 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 3 | AY.93 | 0.000546 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 3 | B.1.1.222 | 0.000408 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 3 | B.1.1.25 | 0.000569 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | B.1.1.265 | 0.009464 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 3 | B.1.1.372 | 0.001377 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 3 | B.1.1.448 | 0.004065 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 3 | B.1.36.18 | 0.00042 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | B.1.411 | 0.011111 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 3 | B.1.466.2 | 0.000391 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 3 | B.1.628 | 0.000352 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 3 | 3 | C.18 | 0.007772 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.22 | 0.004184 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | AY.6 | 0.000041 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | AY.85 | 0.000427 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | AY.88 | 0.000884 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | B.1.1.33 | 0.000421 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.1.41 | 0.012658 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.1.413 | 0.013793 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.139 | 0.001466 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.177.72 | 0.00678 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.177.85 | 0.01087 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.218 | 0.010309 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | B.1.258.3 | 0.001675 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | B.1.349 | 0.000715 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 2 | B.1.36 | 0.000146 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.469 | 0.00722 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.523 | 0.004902 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.200 | 0.007463 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.285 | 0.006536 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.288 | 0.001916 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.401 | 0.066667 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.421 | 0.030303 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.1.59 | 0.006494 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.145 | 0.052632 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.212 | 0.016667 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.221.2 | 0.004016 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | C.25 | 0.125 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp15A1-B | 114 | T114T | acG | acT | 1 | 1 | Q.2 | 0.000613 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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