CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 114

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B114T114TT6566TsynacGacT850042920.50494119960-19962
ORF1ab/nsp15A1-B114T114TT6566TsynacGacA850039220.46141219960-19962
ORF1ab/nsp15A1-B114T114TT6566TsynacGacC85002860.033647119960-19962
ORF1ab/nsp15A1-B114T114AT6566AnonsynAcgGcg618861600.99547519960-19962
ORF1ab/nsp15A1-B114T114AT6566AnonsynAcGGcA6188210.0033936719960-19962
ORF1ab/nsp15A1-B114T114AT6566AnonsynAcGGcT618870.0011312219960-19962
ORF1ab/nsp15A1-B114T114MT6566MnonsynaCgaTg42034203119960-19962
ORF1ab/nsp15A1-B114T114KT6566KnonsynaCgaAg327327119960-19962
ORF1ab/nsp15A1-B114T114delT6566deldelACG---182182119960-19962
ORF1ab/nsp15A1-B114T114PT6566PnonsynAcgCcg20190.9519960-19962
ORF1ab/nsp15A1-B114T114PT6566PnonsynAcGCcA2010.0519960-19962
ORF1ab/nsp15A1-B114T114VT6566VnonsynACgGTg960.66666719960-19962
ORF1ab/nsp15A1-B114T114VT6566VnonsynACGGTA920.22222219960-19962
ORF1ab/nsp15A1-B114T114VT6566VnonsynACGGTT910.11111119960-19962
ORF1ab/nsp15A1-B114T114ST6566SnonsynAcgTcg55119960-19962
ORF1ab/nsp15A1-B114T114IT6566InonsynaCGaTT530.619960-19962
ORF1ab/nsp15A1-B114T114IT6566InonsynaCGaTC510.219960-19962
ORF1ab/nsp15A1-B114T114IT6566InonsynaCGaTA510.219960-19962
ORF1ab/nsp15A1-B114T114RT6566RnonsynaCgaGg44119960-19962
ORF1ab/nsp15A1-B114T114GT6566GnonsynACGGGA320.66666719960-19962
ORF1ab/nsp15A1-B114T114GT6566GnonsynACgGGg310.33333319960-19962
ORF1ab/nsp15A1-B114T114LT6566LnonsynACgTTg22119960-19962
ORF1ab/nsp15A1-B114T114del1T6566del1delaCga-g210.519960-19962
ORF1ab/nsp15A1-B114T114del1T6566del1delacGac-210.519960-19962
ORF1ab/nsp15A1-B114T114QT6566QnonsynACGCAA11119960-19962
ORF1ab/nsp15A1-B114T114ET6566EnonsynACgGAg11119960-19962
ORF1ab/nsp15A1-B114T114NT6566NnonsynaCGaAC11119960-19962
ORF1ab/nsp15A1-B114T114DT6566DnonsynACGGAT11119960-19962

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B114T114TacGacT42928500All0.000821
ORF1ab/nsp15A1-B114T114TacGacA39228500All0.00075
ORF1ab/nsp15A1-B114T114TacGacC2868500All0.000055
ORF1ab/nsp15A1-B114T114AAcgGcg61606188All0.001178
ORF1ab/nsp15A1-B114T114AAcGGcA216188All0.000004
ORF1ab/nsp15A1-B114T114AAcGGcT76188All0.000001
ORF1ab/nsp15A1-B114T114MaCgaTg42034203All0.000804
ORF1ab/nsp15A1-B114T114AAcgGcg38743880AY.40.00603
ORF1ab/nsp15A1-B114T114AAcGGcT63880AY.40.000009
ORF1ab/nsp15A1-B114T114AAcgGcg15921593B.1.1.370.30704
ORF1ab/nsp15A1-B114T114AAcGGcT11593B.1.1.370.000193
ORF1ab/nsp15A1-B114T114TacGacA15451545B.1.619.10.99102
ORF1ab/nsp15A1-B114T114TacGacT10211219B.1.1.70.000914
ORF1ab/nsp15A1-B114T114TacGacA1811219B.1.1.70.000162
ORF1ab/nsp15A1-B114T114TacGacC171219B.1.1.70.000015
ORF1ab/nsp15A1-B114T114MaCgaTg11711171B.1.1.70.001048
ORF1ab/nsp15A1-B114T114TacGacA11011101B.1.6190.959059
ORF1ab/nsp15A1-B114T114TacGacT431611B.1.617.20.001623
ORF1ab/nsp15A1-B114T114TacGacA175611B.1.617.20.000659
ORF1ab/nsp15A1-B114T114TacGacC5611B.1.617.20.000019
ORF1ab/nsp15A1-B114T114MaCgaTg480480B.1.617.20.001807
ORF1ab/nsp15A1-B114T114TacGacA215342AY.430.000953
ORF1ab/nsp15A1-B114T114TacGacT125342AY.430.000554
ORF1ab/nsp15A1-B114T114TacGacC2342AY.430.000009
ORF1ab/nsp15A1-B114T114KaCgaAg327327All0.000063
ORF1ab/nsp15A1-B114T114TacGacT215282B.10.001969
ORF1ab/nsp15A1-B114T114TacGacA57282B.10.000522
ORF1ab/nsp15A1-B114T114TacGacC10282B.10.000092
ORF1ab/nsp15A1-B114T114MaCgaTg276276AY.40.00043
ORF1ab/nsp15A1-B114T114MaCgaTg257257AY.430.001139
ORF1ab/nsp15A1-B114T114TacGacT234251AY.30.002327
ORF1ab/nsp15A1-B114T114TacGacA17251AY.30.000169
ORF1ab/nsp15A1-B114T114TacGacT230249AY.40.000358
ORF1ab/nsp15A1-B114T114TacGacA16249AY.40.000025
ORF1ab/nsp15A1-B114T114TacGacC3249AY.40.000005
ORF1ab/nsp15A1-B114T114KaCgaAg214214AY.46.40.035203
ORF1ab/nsp15A1-B114T114TacGacC183183B.1.4800.455224
ORF1ab/nsp15A1-B114T114delACG---182182All0.000035
ORF1ab/nsp15A1-B114T114AAcgGcg166166AY.430.000735
ORF1ab/nsp15A1-B114T114TacGacA110152P.10.001733
ORF1ab/nsp15A1-B114T114TacGacT42152P.10.000662
ORF1ab/nsp15A1-B114T114TacGacT87146AY.440.00053
ORF1ab/nsp15A1-B114T114TacGacA58146AY.440.000353
ORF1ab/nsp15A1-B114T114TacGacC1146AY.440.000006
ORF1ab/nsp15A1-B114T114AAcgGcg135135B.1.466.10.971223
ORF1ab/nsp15A1-B114T114TacGacT128132B.1.20.001127
ORF1ab/nsp15A1-B114T114TacGacA2132B.1.20.000018
ORF1ab/nsp15A1-B114T114TacGacC2132B.1.20.000018
ORF1ab/nsp15A1-B114T114TacGacT112130AY.1030.000695
ORF1ab/nsp15A1-B114T114TacGacA16130AY.1030.000099
ORF1ab/nsp15A1-B114T114TacGacC2130AY.1030.000012
ORF1ab/nsp15A1-B114T114MaCgaTg125125B.1.2430.008698
ORF1ab/nsp15A1-B114T114TacGacT115121AY.1020.003049
ORF1ab/nsp15A1-B114T114TacGacA4121AY.1020.000106
ORF1ab/nsp15A1-B114T114TacGacC2121AY.1020.000053
ORF1ab/nsp15A1-B114T114TacGacT105115AY.250.000632
ORF1ab/nsp15A1-B114T114TacGacA9115AY.250.000054
ORF1ab/nsp15A1-B114T114TacGacC1115AY.250.000006
ORF1ab/nsp15A1-B114T114MaCgaTg113113AY.9.10.009461
ORF1ab/nsp15A1-B114T114TacGacA108109B.1.2210.007672
ORF1ab/nsp15A1-B114T114TacGacT1109B.1.2210.000071
ORF1ab/nsp15A1-B114T114TacGacT9094AY.330.00601
ORF1ab/nsp15A1-B114T114TacGacC494AY.330.000267
ORF1ab/nsp15A1-B114T114MaCgaTg8888B.1.177.860.016144
ORF1ab/nsp15A1-B114T114TacGacT8183AY.1000.003727
ORF1ab/nsp15A1-B114T114TacGacA283AY.1000.000092
ORF1ab/nsp15A1-B114T114TacGacT8080B.1.1.3480.063694
ORF1ab/nsp15A1-B114T114AAcgGcg7979B.1.617.20.000297
ORF1ab/nsp15A1-B114T114MaCgaTg7373AY.440.000444
ORF1ab/nsp15A1-B114T114MaCgaTg6767AY.420.002695
ORF1ab/nsp15A1-B114T114TacGacT6767B.1.2821
ORF1ab/nsp15A1-B114T114TacGacT5866B.1.1770.000764
ORF1ab/nsp15A1-B114T114TacGacA866B.1.1770.000105
ORF1ab/nsp15A1-B114T114MaCgaTg6565B.1.5610.025804
ORF1ab/nsp15A1-B114T114MaCgaTg6464B.1.1600.001996
ORF1ab/nsp15A1-B114T114MaCgaTg6464B.1.6280.022551
ORF1ab/nsp15A1-B114T114MaCgaTg6161B.1.20.000537
ORF1ab/nsp15A1-B114T114AAcgGcg5959B.1.1770.000777
ORF1ab/nsp15A1-B114T114MaCgaTg4949AD.20.010729
ORF1ab/nsp15A1-B114T114delACG---4949B.1.1.70.000044
ORF1ab/nsp15A1-B114T114MaCgaTg4747B.1.1770.000619
ORF1ab/nsp15A1-B114T114MaCgaTg4545AY.1030.000279
ORF1ab/nsp15A1-B114T114MaCgaTg4545AY.30.000448
ORF1ab/nsp15A1-B114T114MaCgaTg4545B.10.000412
ORF1ab/nsp15A1-B114T114delACG---4545B.1.20.000396
ORF1ab/nsp15A1-B114T114MaCgaTg4343AY.330.002871
ORF1ab/nsp15A1-B114T114MaCgaTg4141AY.250.000247
ORF1ab/nsp15A1-B114T114TacGacT4040B.1.177.210.003059
ORF1ab/nsp15A1-B114T114MaCgaTg4040B.1.4290.000941
ORF1ab/nsp15A1-B114T114MaCgaTg4040P.20.007465
ORF1ab/nsp15A1-B114T114TacGacT3739B.1.2580.002462
ORF1ab/nsp15A1-B114T114TacGacA239B.1.2580.000133
ORF1ab/nsp15A1-B114T114MaCgaTg3737AY.200.001438
ORF1ab/nsp15A1-B114T114AAcgGcg3737B.1.1.70.000033
ORF1ab/nsp15A1-B114T114TacGacT2435AY.390.000593
ORF1ab/nsp15A1-B114T114TacGacA1035AY.390.000247
ORF1ab/nsp15A1-B114T114TacGacC135AY.390.000025
ORF1ab/nsp15A1-B114T114TacGacT3535B.1.243.10.777778
ORF1ab/nsp15A1-B114T114TacGacT3334AY.340.0032
ORF1ab/nsp15A1-B114T114TacGacA134AY.340.000097
ORF1ab/nsp15A1-B114T114MaCgaTg3434AY.4.20.000737
ORF1ab/nsp15A1-B114T114AAcgGcg3434B.1.6370.002484
ORF1ab/nsp15A1-B114T114TacGacT2632AY.50.000537
ORF1ab/nsp15A1-B114T114TacGacA632AY.50.000124
ORF1ab/nsp15A1-B114T114AAcgGcg3030B.1.1.3720.020661
ORF1ab/nsp15A1-B114T114MaCgaTg3030P.10.000473
ORF1ab/nsp15A1-B114T114TacGacT2929AP.10.043544
ORF1ab/nsp15A1-B114T114TacGacT2929B.1.5970.134259
ORF1ab/nsp15A1-B114T114MaCgaTg2828AY.610.002934
ORF1ab/nsp15A1-B114T114TacGacT2828AY.840.012248
ORF1ab/nsp15A1-B114T114MaCgaTg2828B.1.10.000508
ORF1ab/nsp15A1-B114T114TacGacT2727AY.9.20.000992
ORF1ab/nsp15A1-B114T114MaCgaTg2727B.1.1.2140.001497
ORF1ab/nsp15A1-B114T114MaCgaTg2727B.1.36.180.011345
ORF1ab/nsp15A1-B114T114MaCgaTg2626AY.1190.000918
ORF1ab/nsp15A1-B114T114TacGacA2425B.1.1.500.016293
ORF1ab/nsp15A1-B114T114TacGacT125B.1.1.500.000679
ORF1ab/nsp15A1-B114T114TacGacC2425B.1.6210.002124
ORF1ab/nsp15A1-B114T114TacGacT125B.1.6210.000089
ORF1ab/nsp15A1-B114T114AAcgGcg2424AY.390.000593
ORF1ab/nsp15A1-B114T114KaCgaAg2424B.1.1.70.000021
ORF1ab/nsp15A1-B114T114TacGacA2324B.1.5650.018639
ORF1ab/nsp15A1-B114T114TacGacT124B.1.5650.00081
ORF1ab/nsp15A1-B114T114TacGacT1823B.1.10.000327
ORF1ab/nsp15A1-B114T114TacGacA323B.1.10.000054
ORF1ab/nsp15A1-B114T114TacGacC223B.1.10.000036
ORF1ab/nsp15A1-B114T114MaCgaTg2222B.1.5260.000517
ORF1ab/nsp15A1-B114T114MaCgaTg2121AY.290.000331
ORF1ab/nsp15A1-B114T114TacGacT1921AY.290.0003
ORF1ab/nsp15A1-B114T114TacGacA221AY.290.000032
ORF1ab/nsp15A1-B114T114TacGacT1621AY.610.001676
ORF1ab/nsp15A1-B114T114TacGacA521AY.610.000524
ORF1ab/nsp15A1-B114T114MaCgaTg2121B.1.2210.001492
ORF1ab/nsp15A1-B114T114TacGacT1921B.1.4290.000447
ORF1ab/nsp15A1-B114T114TacGacA221B.1.4290.000047
ORF1ab/nsp15A1-B114T114PAcgCcg1920All0.000004
ORF1ab/nsp15A1-B114T114PAcGCcA120All0
ORF1ab/nsp15A1-B114T114MaCgaTg2020B.1.4270.00101
ORF1ab/nsp15A1-B114T114TacGacT1919AY.200.000738
ORF1ab/nsp15A1-B114T114TacGacT1919AY.260.000538
ORF1ab/nsp15A1-B114T114TacGacA1919AY.360.002816
ORF1ab/nsp15A1-B114T114TacGacT1919B.1.1.4200.019115
ORF1ab/nsp15A1-B114T114TacGacT1919C.36.30.010777
ORF1ab/nsp15A1-B114T114MaCgaTg1818B.1.1.1450.666667
ORF1ab/nsp15A1-B114T114TacGacA1218B.1.3510.000357
ORF1ab/nsp15A1-B114T114TacGacT618B.1.3510.000178
ORF1ab/nsp15A1-B114T114MaCgaTg1717AY.260.000481
ORF1ab/nsp15A1-B114T114TacGacT1717AY.46.60.001228
ORF1ab/nsp15A1-B114T114AAcGGcA1617B.1.20.000141
ORF1ab/nsp15A1-B114T114AAcgGcg117B.1.20.000009
ORF1ab/nsp15A1-B114T114TacGacT1717Q.30.002466
ORF1ab/nsp15A1-B114T114MaCgaTg1616AY.390.000395
ORF1ab/nsp15A1-B114T114TacGacT1116AY.98.10.000533
ORF1ab/nsp15A1-B114T114TacGacA516AY.98.10.000242
ORF1ab/nsp15A1-B114T114TacGacA916B.1.5260.000212
ORF1ab/nsp15A1-B114T114TacGacT716B.1.5260.000165
ORF1ab/nsp15A1-B114T114AAcgGcg1616P.20.002986
ORF1ab/nsp15A1-B114T114TacGacA815B.1.1.5190.000318
ORF1ab/nsp15A1-B114T114TacGacT715B.1.1.5190.000278
ORF1ab/nsp15A1-B114T114TacGacT1515B.1.3690.004278
ORF1ab/nsp15A1-B114T114MaCgaTg1515B.1.6370.001096
ORF1ab/nsp15A1-B114T114MaCgaTg1515Q.80.002474
ORF1ab/nsp15A1-B114T114TacGacA814AY.1200.000297
ORF1ab/nsp15A1-B114T114TacGacT614AY.1200.000223
ORF1ab/nsp15A1-B114T114MaCgaTg1414B.1.258.140.013725
ORF1ab/nsp15A1-B114T114MaCgaTg1414B.1.438.10.001502
ORF1ab/nsp15A1-B114T114TacGacT814P.1.140.000382
ORF1ab/nsp15A1-B114T114TacGacC514P.1.140.000239
ORF1ab/nsp15A1-B114T114TacGacA114P.1.140.000048
ORF1ab/nsp15A1-B114T114TacGacT1313A.23.10.009155
ORF1ab/nsp15A1-B114T114TacGacT1313AY.1050.00836
ORF1ab/nsp15A1-B114T114TacGacT1313AY.1100.001465
ORF1ab/nsp15A1-B114T114MaCgaTg1313AY.460.001353
ORF1ab/nsp15A1-B114T114TacGacT1113B.1.1600.000343
ORF1ab/nsp15A1-B114T114TacGacA213B.1.1600.000062
ORF1ab/nsp15A1-B114T114TacGacT1313B.1.177.810.002461
ORF1ab/nsp15A1-B114T114KaCgaAg1313B.1.2580.000865
ORF1ab/nsp15A1-B114T114MaCgaTg1313B.1.2580.000865
ORF1ab/nsp15A1-B114T114TacGacT1313B.1.36.80.013
ORF1ab/nsp15A1-B114T114TacGacA1313N.50.022968
ORF1ab/nsp15A1-B114T114MaCgaTg1313P.1.70.004151
ORF1ab/nsp15A1-B114T114KaCgaAg1212AY.1180.000752
ORF1ab/nsp15A1-B114T114MaCgaTg1212B.1.1.5190.000477
ORF1ab/nsp15A1-B114T114TacGacA1212P.1.120.005808
ORF1ab/nsp15A1-B114T114MaCgaTg1111AY.1020.000292
ORF1ab/nsp15A1-B114T114TacGacA711AY.1210.000947
ORF1ab/nsp15A1-B114T114TacGacT411AY.1210.000541
ORF1ab/nsp15A1-B114T114TacGacT1111AY.4.50.001182
ORF1ab/nsp15A1-B114T114TacGacT1111AY.920.00316
ORF1ab/nsp15A1-B114T114TacGacT1111B.1.617.10.001419
ORF1ab/nsp15A1-B114T114TacGacT1010AY.1160.002868
ORF1ab/nsp15A1-B114T114TacGacT710AY.1170.000592
ORF1ab/nsp15A1-B114T114TacGacA310AY.1170.000254
ORF1ab/nsp15A1-B114T114TacGacC610AY.1190.000212
ORF1ab/nsp15A1-B114T114TacGacT210AY.1190.000071
ORF1ab/nsp15A1-B114T114TacGacA210AY.1190.000071
ORF1ab/nsp15A1-B114T114AAcgGcg1010AY.39.10.000396
ORF1ab/nsp15A1-B114T114TacGacT910AY.46.40.001481
ORF1ab/nsp15A1-B114T114TacGacA110AY.46.40.000165
ORF1ab/nsp15A1-B114T114TacGacT1010AY.890.04902
ORF1ab/nsp15A1-B114T114TacGacT1010B.1.160.80.012887
ORF1ab/nsp15A1-B114T114TacGacT810P.20.001493
ORF1ab/nsp15A1-B114T114TacGacA210P.20.000373
ORF1ab/nsp15A1-B114T114MaCgaTg99A.2.50.004491
ORF1ab/nsp15A1-B114T114VACgGTg69All0.000001
ORF1ab/nsp15A1-B114T114VACGGTA29All0
ORF1ab/nsp15A1-B114T114VACGGTT19All0
ORF1ab/nsp15A1-B114T114TacGacT69AY.230.000418
ORF1ab/nsp15A1-B114T114TacGacA39AY.230.000209
ORF1ab/nsp15A1-B114T114MaCgaTg99AY.270.000582
ORF1ab/nsp15A1-B114T114TacGacT89AY.450.000973
ORF1ab/nsp15A1-B114T114TacGacA19AY.450.000122
ORF1ab/nsp15A1-B114T114AAcgGcg99B.10.000082
ORF1ab/nsp15A1-B114T114TacGacT89B.1.1.2140.000444
ORF1ab/nsp15A1-B114T114TacGacC19B.1.1.2140.000055
ORF1ab/nsp15A1-B114T114TacGacT79B.1.1.280.002179
ORF1ab/nsp15A1-B114T114TacGacC29B.1.1.280.000622
ORF1ab/nsp15A1-B114T114TacGacA99B.1.1.700.00307
ORF1ab/nsp15A1-B114T114TacGacT78A0.002709
ORF1ab/nsp15A1-B114T114TacGacA18A0.000387
ORF1ab/nsp15A1-B114T114MaCgaTg88AY.1000.000368
ORF1ab/nsp15A1-B114T114MaCgaTg88AY.1200.000297
ORF1ab/nsp15A1-B114T114TacGacT78AY.270.000453
ORF1ab/nsp15A1-B114T114TacGacA18AY.270.000065
ORF1ab/nsp15A1-B114T114MaCgaTg88AY.450.000973
ORF1ab/nsp15A1-B114T114TacGacT58AY.460.00052
ORF1ab/nsp15A1-B114T114TacGacA38AY.460.000312
ORF1ab/nsp15A1-B114T114MaCgaTg88AY.46.60.000578
ORF1ab/nsp15A1-B114T114MaCgaTg88AY.700.001668
ORF1ab/nsp15A1-B114T114MaCgaTg88AY.980.000632
ORF1ab/nsp15A1-B114T114TacGacT88AY.980.000632
ORF1ab/nsp15A1-B114T114MaCgaTg88B.1.1.1160.5
ORF1ab/nsp15A1-B114T114AAcgGcg88B.1.1.1630.061069
ORF1ab/nsp15A1-B114T114MaCgaTg88B.1.1.2840.000859
ORF1ab/nsp15A1-B114T114TacGacA68B.1.5250.000679
ORF1ab/nsp15A1-B114T114TacGacC18B.1.5250.000113
ORF1ab/nsp15A1-B114T114TacGacT18B.1.5250.000113
ORF1ab/nsp15A1-B114T114KaCgaAg77AD.10.028807
ORF1ab/nsp15A1-B114T114TacGacT77AY.470.000218
ORF1ab/nsp15A1-B114T114TacGacT77AZ.20.005747
ORF1ab/nsp15A1-B114T114MaCgaTg77B.1.3960.00494
ORF1ab/nsp15A1-B114T114delACG---77B.1.5260.000165
ORF1ab/nsp15A1-B114T114TacGacT57B.1.5950.001305
ORF1ab/nsp15A1-B114T114TacGacA27B.1.5950.000522
ORF1ab/nsp15A1-B114T114TacGacT47B.1.5960.000349
ORF1ab/nsp15A1-B114T114TacGacA37B.1.5960.000261
ORF1ab/nsp15A1-B114T114MaCgaTg77C.370.000812
ORF1ab/nsp15A1-B114T114MaCgaTg77Q.30.001015
ORF1ab/nsp15A1-B114T114TacGacT66AY.120.10.001926
ORF1ab/nsp15A1-B114T114MaCgaTg66AY.23.10.002504
ORF1ab/nsp15A1-B114T114TacGacT66AY.29.10.001323
ORF1ab/nsp15A1-B114T114KaCgaAg66AY.40.000009
ORF1ab/nsp15A1-B114T114MaCgaTg66AY.4.50.000645
ORF1ab/nsp15A1-B114T114AAcgGcg66AY.420.000241
ORF1ab/nsp15A1-B114T114MaCgaTg66AY.470.000187
ORF1ab/nsp15A1-B114T114TacGacT66AY.640.003571
ORF1ab/nsp15A1-B114T114delACG---66B.10.000055
ORF1ab/nsp15A1-B114T114AAcgGcg66B.1.10.000109
ORF1ab/nsp15A1-B114T114AAcgGcg66B.1.1.2440.092308
ORF1ab/nsp15A1-B114T114TacGacT56B.1.2430.000348
ORF1ab/nsp15A1-B114T114TacGacA16B.1.2430.00007
ORF1ab/nsp15A1-B114T114MaCgaTg66B.1.3510.000178
ORF1ab/nsp15A1-B114T114delACG---66B.1.3510.000178
ORF1ab/nsp15A1-B114T114MaCgaTg66P.1.170.000971
ORF1ab/nsp15A1-B114T114TacGacT66Q.80.000989
ORF1ab/nsp15A1-B114T114SAcgTcg55All0.000001
ORF1ab/nsp15A1-B114T114IaCGaTT35All0.000001
ORF1ab/nsp15A1-B114T114IaCGaTA15All0
ORF1ab/nsp15A1-B114T114IaCGaTC15All0
ORF1ab/nsp15A1-B114T114KaCgaAg55AY.1030.000031
ORF1ab/nsp15A1-B114T114TacGacT55AY.1060.001674
ORF1ab/nsp15A1-B114T114TacGacT55AY.1080.005513
ORF1ab/nsp15A1-B114T114MaCgaTg55AY.1170.000423
ORF1ab/nsp15A1-B114T114MaCgaTg55AY.16.10.00235
ORF1ab/nsp15A1-B114T114AAcgGcg55AY.250.00003
ORF1ab/nsp15A1-B114T114PAcgCcg55AY.30.00005
ORF1ab/nsp15A1-B114T114TacGacT35AY.420.000121
ORF1ab/nsp15A1-B114T114TacGacA25AY.420.00008
ORF1ab/nsp15A1-B114T114MaCgaTg55AY.640.002976
ORF1ab/nsp15A1-B114T114MaCgaTg55AY.750.00028
ORF1ab/nsp15A1-B114T114MaCgaTg55AY.90.000338
ORF1ab/nsp15A1-B114T114MaCgaTg55AY.99.20.000461
ORF1ab/nsp15A1-B114T114PAcgCcg55B.1.1770.000066
ORF1ab/nsp15A1-B114T114MaCgaTg55B.1.177.600.001092
ORF1ab/nsp15A1-B114T114MaCgaTg55B.1.2100.010661
ORF1ab/nsp15A1-B114T114AAcgGcg55B.1.3910.005637
ORF1ab/nsp15A1-B114T114delACG---55B.1.4290.000118
ORF1ab/nsp15A1-B114T114TacGacT55B.1.5800.020325
ORF1ab/nsp15A1-B114T114delACG---55B.1.5960.000436
ORF1ab/nsp15A1-B114T114MaCgaTg55B.1.5960.000436
ORF1ab/nsp15A1-B114T114delACG---55B.1.617.20.000019
ORF1ab/nsp15A1-B114T114TacGacT45C.370.000464
ORF1ab/nsp15A1-B114T114TacGacA15C.370.000116
ORF1ab/nsp15A1-B114T114TacGacT45D.20.0003
ORF1ab/nsp15A1-B114T114TacGacA15D.20.000075
ORF1ab/nsp15A1-B114T114MaCgaTg55P.1.140.000239
ORF1ab/nsp15A1-B114T114TacGacT55Q.10.000632
ORF1ab/nsp15A1-B114T114RaCgaGg44All0.000001
ORF1ab/nsp15A1-B114T114MaCgaTg44AY.1110.000733
ORF1ab/nsp15A1-B114T114MaCgaTg44AY.1180.000251
ORF1ab/nsp15A1-B114T114TacGacT44AY.120.001264
ORF1ab/nsp15A1-B114T114delACG---44AY.30.00004
ORF1ab/nsp15A1-B114T114TacGacT34AY.4.20.000065
ORF1ab/nsp15A1-B114T114TacGacA14AY.4.20.000022
ORF1ab/nsp15A1-B114T114KaCgaAg44AY.460.000416
ORF1ab/nsp15A1-B114T114TacGacA44AY.46.10.004107
ORF1ab/nsp15A1-B114T114MaCgaTg44AY.50.000083
ORF1ab/nsp15A1-B114T114MaCgaTg44AY.520.003257
ORF1ab/nsp15A1-B114T114TacGacT44AY.530.00115
ORF1ab/nsp15A1-B114T114MaCgaTg44AY.9.20.000147
ORF1ab/nsp15A1-B114T114KaCgaAg44B0.000511
ORF1ab/nsp15A1-B114T114TacGacA44B.1.1.2800.012346
ORF1ab/nsp15A1-B114T114TacGacA34B.1.1.2840.000322
ORF1ab/nsp15A1-B114T114TacGacT14B.1.1.2840.000107
ORF1ab/nsp15A1-B114T114TacGacA44B.1.1.390.002039
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.1.5160.266667
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.2360.008214
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.2410.003247
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.258.170.000416
ORF1ab/nsp15A1-B114T114TacGacT44B.1.3380.034483
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.36.290.002069
ORF1ab/nsp15A1-B114T114TacGacT44B.1.4270.000202
ORF1ab/nsp15A1-B114T114TacGacT44B.1.5640.001704
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.5950.001044
ORF1ab/nsp15A1-B114T114MaCgaTg44B.1.6020.026144
ORF1ab/nsp15A1-B114T114KaCgaAg44B.1.617.20.000015
ORF1ab/nsp15A1-B114T114TacGacT44L.30.014184
ORF1ab/nsp15A1-B114T114TacGacT44P.1.100.001078
ORF1ab/nsp15A1-B114T114VACgGTg44Q.30.00058
ORF1ab/nsp15A1-B114T114TacGacT44R.10.00036
ORF1ab/nsp15A1-B114T114TacGacT33A.2.5.10.014423
ORF1ab/nsp15A1-B114T114GACGGGA23All0
ORF1ab/nsp15A1-B114T114GACgGGg13All0
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.1070.001398
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.120.000948
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.1210.000406
ORF1ab/nsp15A1-B114T114TacGacT33AY.16.10.00141
ORF1ab/nsp15A1-B114T114KaCgaAg33AY.200.000117
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.3.10.000256
ORF1ab/nsp15A1-B114T114TacGacT33AY.34.10.00153
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.370.000948
ORF1ab/nsp15A1-B114T114TacGacT23AY.39.10.000079
ORF1ab/nsp15A1-B114T114TacGacA13AY.39.10.00004
ORF1ab/nsp15A1-B114T114PAcgCcg33AY.40.000005
ORF1ab/nsp15A1-B114T114delACG---33AY.430.000013
ORF1ab/nsp15A1-B114T114AAcgGcg33AY.440.000018
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.46.10.00308
ORF1ab/nsp15A1-B114T114TacGacT33AY.46.50.000595
ORF1ab/nsp15A1-B114T114TacGacT33AY.5.40.00083
ORF1ab/nsp15A1-B114T114TacGacA23AY.540.000191
ORF1ab/nsp15A1-B114T114TacGacT13AY.540.000095
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.580.002722
ORF1ab/nsp15A1-B114T114TacGacA33AY.690.00056
ORF1ab/nsp15A1-B114T114TacGacT23AY.750.000112
ORF1ab/nsp15A1-B114T114TacGacA13AY.750.000056
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.75.10.000541
ORF1ab/nsp15A1-B114T114MaCgaTg33AY.910.002191
ORF1ab/nsp15A1-B114T114TacGacT23AY.930.000546
ORF1ab/nsp15A1-B114T114TacGacC13AY.930.000273
ORF1ab/nsp15A1-B114T114TacGacA33B.1.1.1760.001318
ORF1ab/nsp15A1-B114T114TacGacT23B.1.1.2220.000408
ORF1ab/nsp15A1-B114T114TacGacA13B.1.1.2220.000204
ORF1ab/nsp15A1-B114T114TacGacA23B.1.1.250.001137
ORF1ab/nsp15A1-B114T114TacGacT13B.1.1.250.000569
ORF1ab/nsp15A1-B114T114TacGacT33B.1.1.2650.009464
ORF1ab/nsp15A1-B114T114MaCgaTg33B.1.1.3150.025424
ORF1ab/nsp15A1-B114T114TacGacT23B.1.1.3720.001377
ORF1ab/nsp15A1-B114T114TacGacA13B.1.1.3720.000689
ORF1ab/nsp15A1-B114T114TacGacT23B.1.1.4480.004065
ORF1ab/nsp15A1-B114T114TacGacC13B.1.1.4480.002033
ORF1ab/nsp15A1-B114T114MaCgaTg33B.1.1.700.001023
ORF1ab/nsp15A1-B114T114MaCgaTg33B.1.177.70.000495
ORF1ab/nsp15A1-B114T114TacGacT33B.1.258.170.000312
ORF1ab/nsp15A1-B114T114TacGacA23B.1.36.180.00084
ORF1ab/nsp15A1-B114T114TacGacT13B.1.36.180.00042
ORF1ab/nsp15A1-B114T114TacGacA33B.1.3620.004622
ORF1ab/nsp15A1-B114T114TacGacT33B.1.4110.011111
ORF1ab/nsp15A1-B114T114TacGacA23B.1.466.20.000782
ORF1ab/nsp15A1-B114T114TacGacT13B.1.466.20.000391
ORF1ab/nsp15A1-B114T114delACG---33B.1.5170.001281
ORF1ab/nsp15A1-B114T114MaCgaTg33B.1.5640.001278
ORF1ab/nsp15A1-B114T114TacGacA33B.1.621.10.001517
ORF1ab/nsp15A1-B114T114TacGacA23B.1.6280.000705
ORF1ab/nsp15A1-B114T114TacGacT13B.1.6280.000352
ORF1ab/nsp15A1-B114T114TacGacT33B.1.6370.000219
ORF1ab/nsp15A1-B114T114MaCgaTg33B.1.9.50.017045
ORF1ab/nsp15A1-B114T114TacGacT33C.180.007772
ORF1ab/nsp15A1-B114T114TacGacC23P.1.10.000635
ORF1ab/nsp15A1-B114T114TacGacA13P.1.10.000318
ORF1ab/nsp15A1-B114T114KaCgaAg33P.1.140.000143
ORF1ab/nsp15A1-B114T114MaCgaTg33Z.10.008671
ORF1ab/nsp15A1-B114T114GACGGGA220.111111
ORF1ab/nsp15A1-B114T114VACGGTA220.111111
ORF1ab/nsp15A1-B114T114LACgTTg220.111111
ORF1ab/nsp15A1-B114T114delACG---220.111111
ORF1ab/nsp15A1-B114T114AAcGGcA220.111111
ORF1ab/nsp15A1-B114T114KaCgaAg22A.2.20.003378
ORF1ab/nsp15A1-B114T114LACgTTg22All0
ORF1ab/nsp15A1-B114T114del1aCga-g12All0
ORF1ab/nsp15A1-B114T114del1acGac-12All0
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.1010.000981
ORF1ab/nsp15A1-B114T114TacGacA22AY.1010.000981
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.1020.000053
ORF1ab/nsp15A1-B114T114TacGacT22AY.1040.003968
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.1050.001286
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.1060.00067
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.1110.000366
ORF1ab/nsp15A1-B114T114TacGacT22AY.1130.000285
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.1130.000285
ORF1ab/nsp15A1-B114T114TacGacT22AY.1180.000125
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.1190.000071
ORF1ab/nsp15A1-B114T114delACG---22AY.1200.000074
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.1200.000074
ORF1ab/nsp15A1-B114T114delACG---22AY.1210.000271
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.130.000322
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.160.000759
ORF1ab/nsp15A1-B114T114TacGacT22AY.220.004184
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.360.000296
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.39.10.000079
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.4.2.10.000298
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.4.40.000818
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.410.000588
ORF1ab/nsp15A1-B114T114RaCgaGg22AY.430.000009
ORF1ab/nsp15A1-B114T114KaCgaAg22AY.430.000009
ORF1ab/nsp15A1-B114T114delACG---22AY.440.000012
ORF1ab/nsp15A1-B114T114PAcgCcg22AY.440.000012
ORF1ab/nsp15A1-B114T114TacGacT22AY.46.20.001271
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.46.20.001271
ORF1ab/nsp15A1-B114T114AAcgGcg22AY.50.000041
ORF1ab/nsp15A1-B114T114TacGacA22AY.5.30.000675
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.550.001835
ORF1ab/nsp15A1-B114T114AAcGGcA12AY.590.00053
ORF1ab/nsp15A1-B114T114AAcgGcg12AY.590.00053
ORF1ab/nsp15A1-B114T114TacGacA12AY.60.000041
ORF1ab/nsp15A1-B114T114TacGacT12AY.60.000041
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.600.001876
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.620.000871
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.670.000929
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.680.000547
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.7.10.000225
ORF1ab/nsp15A1-B114T114TacGacT22AY.75.10.000361
ORF1ab/nsp15A1-B114T114TacGacT12AY.850.000427
ORF1ab/nsp15A1-B114T114TacGacA12AY.850.000427
ORF1ab/nsp15A1-B114T114TacGacT12AY.880.000884
ORF1ab/nsp15A1-B114T114TacGacA12AY.880.000884
ORF1ab/nsp15A1-B114T114TacGacT22AY.90.000135
ORF1ab/nsp15A1-B114T114TacGacT22AY.900.001369
ORF1ab/nsp15A1-B114T114MaCgaTg22AY.930.000546
ORF1ab/nsp15A1-B114T114TacGacT22AY.940.000885
ORF1ab/nsp15A1-B114T114TacGacT22AY.950.001522
ORF1ab/nsp15A1-B114T114TacGacA22B0.000256
ORF1ab/nsp15A1-B114T114SAcgTcg22B.1.10.000036
ORF1ab/nsp15A1-B114T114KaCgaAg22B.1.10.000036
ORF1ab/nsp15A1-B114T114delACG---22B.1.10.000036
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.1.10.000653
ORF1ab/nsp15A1-B114T114delACG---22B.1.1.1740.006757
ORF1ab/nsp15A1-B114T114TacGacT22B.1.1.2160.001781
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.1.280.000622
ORF1ab/nsp15A1-B114T114TacGacA22B.1.1.2940.002532
ORF1ab/nsp15A1-B114T114AAcgGcg22B.1.1.330.000842
ORF1ab/nsp15A1-B114T114TacGacA12B.1.1.330.000421
ORF1ab/nsp15A1-B114T114TacGacT12B.1.1.330.000421
ORF1ab/nsp15A1-B114T114TacGacT22B.1.1.410.012658
ORF1ab/nsp15A1-B114T114TacGacT22B.1.1.4130.013793
ORF1ab/nsp15A1-B114T114TacGacT22B.1.1390.001466
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.177.120.000303
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.177.190.002861
ORF1ab/nsp15A1-B114T114TacGacA22B.1.177.40.000422
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.177.570.000562
ORF1ab/nsp15A1-B114T114TacGacT22B.1.177.720.00678
ORF1ab/nsp15A1-B114T114TacGacT22B.1.177.850.01087
ORF1ab/nsp15A1-B114T114TacGacT22B.1.2180.010309
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.221.30.001667
ORF1ab/nsp15A1-B114T114TacGacC22B.1.2220.003384
ORF1ab/nsp15A1-B114T114delACG---22B.1.2580.000133
ORF1ab/nsp15A1-B114T114KaCgaAg22B.1.258.150.037736
ORF1ab/nsp15A1-B114T114TacGacT12B.1.258.30.001675
ORF1ab/nsp15A1-B114T114TacGacA12B.1.258.30.001675
ORF1ab/nsp15A1-B114T114TacGacT22B.1.3110.000549
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.3110.000549
ORF1ab/nsp15A1-B114T114TacGacC12B.1.3490.000715
ORF1ab/nsp15A1-B114T114TacGacT12B.1.3490.000715
ORF1ab/nsp15A1-B114T114TacGacT12B.1.360.000146
ORF1ab/nsp15A1-B114T114TacGacA12B.1.360.000146
ORF1ab/nsp15A1-B114T114TacGacT22B.1.36.290.001035
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.3690.00057
ORF1ab/nsp15A1-B114T114TacGacT22B.1.3750.001639
ORF1ab/nsp15A1-B114T114TacGacT22B.1.4040.002604
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.4080.00738
ORF1ab/nsp15A1-B114T114TacGacT22B.1.438.10.000215
ORF1ab/nsp15A1-B114T114AAcgGcg22B.1.4600.035714
ORF1ab/nsp15A1-B114T114TacGacT22B.1.4690.00722
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.4690.00722
ORF1ab/nsp15A1-B114T114TacGacT22B.1.5230.004902
ORF1ab/nsp15A1-B114T114AAcgGcg22B.1.5250.000226
ORF1ab/nsp15A1-B114T114IaCGaTT22B.1.5260.000047
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.5680.002222
ORF1ab/nsp15A1-B114T114TacGacT22B.1.5770.001375
ORF1ab/nsp15A1-B114T114MaCgaTg22B.1.6210.000177
ORF1ab/nsp15A1-B114T114TacGacT22B.1.6270.00404
ORF1ab/nsp15A1-B114T114MaCgaTg22D.20.00015
ORF1ab/nsp15A1-B114T114MaCgaTg22P.1.120.000968
ORF1ab/nsp15A1-B114T114MaCgaTg22P.1.150.000465
ORF1ab/nsp15A1-B114T114TacGacT22P.1.150.000465
ORF1ab/nsp15A1-B114T114TacGacT22Q.40.00091
ORF1ab/nsp15A1-B114T114MaCgaTg22R.10.00018
ORF1ab/nsp15A1-B114T114MaCgaTg11A.10.000282
ORF1ab/nsp15A1-B114T114TacGacT11A.2.40.003367
ORF1ab/nsp15A1-B114T114TacGacT11A.2.50.000499
ORF1ab/nsp15A1-B114T114MaCgaTg11A.2.5.20.001572
ORF1ab/nsp15A1-B114T114TacGacA11A.210.00277
ORF1ab/nsp15A1-B114T114TacGacA11A.50.001923
ORF1ab/nsp15A1-B114T114MaCgaTg11AA.70.009174
ORF1ab/nsp15A1-B114T114NaCGaAC11All0
ORF1ab/nsp15A1-B114T114EACgGAg11All0
ORF1ab/nsp15A1-B114T114DACGGAT11All0
ORF1ab/nsp15A1-B114T114QACGCAA11All0
ORF1ab/nsp15A1-B114T114delACG---11AY.1000.000046
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.1020.000027
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.1030.000006
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.1040.001984
ORF1ab/nsp15A1-B114T114delACG---11AY.1070.000466
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.1100.000113
ORF1ab/nsp15A1-B114T114TacGacA11AY.1110.000183
ORF1ab/nsp15A1-B114T114delACG---11AY.1130.000142
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.1160.000287
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.1170.000085
ORF1ab/nsp15A1-B114T114TacGacC11AY.140.000088
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.140.000088
ORF1ab/nsp15A1-B114T114TacGacT11AY.160.00038
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.20.000356
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.230.00007
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.230.00007
ORF1ab/nsp15A1-B114T114TacGacT11AY.23.10.000417
ORF1ab/nsp15A1-B114T114SAcgTcg11AY.240.000431
ORF1ab/nsp15A1-B114T114delACG---11AY.250.000006
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.260.000028
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.260.000028
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.330.000067
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.34.10.00051
ORF1ab/nsp15A1-B114T114TacGacA11AY.370.000316
ORF1ab/nsp15A1-B114T114TacGacA11AY.380.000499
ORF1ab/nsp15A1-B114T114VACgGTg11AY.40.000002
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.4.20.000022
ORF1ab/nsp15A1-B114T114TacGacA11AY.4.30.000842
ORF1ab/nsp15A1-B114T114TacGacT11AY.4.40.000409
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.4.50.000107
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.400.000964
ORF1ab/nsp15A1-B114T114TacGacA11AY.410.000294
ORF1ab/nsp15A1-B114T114EACgGAg11AY.430.000004
ORF1ab/nsp15A1-B114T114PAcgCcg11AY.430.000004
ORF1ab/nsp15A1-B114T114GACgGGg11AY.430.000004
ORF1ab/nsp15A1-B114T114IaCGaTC11AY.440.000006
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.450.000122
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.460.000104
ORF1ab/nsp15A1-B114T114TacGacT11AY.46.30.000934
ORF1ab/nsp15A1-B114T114delACG---11AY.470.000031
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.470.000031
ORF1ab/nsp15A1-B114T114TacGacT11AY.480.000465
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.490.003195
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.540.000095
ORF1ab/nsp15A1-B114T114TacGacT11AY.550.000917
ORF1ab/nsp15A1-B114T114delACG---11AY.550.000917
ORF1ab/nsp15A1-B114T114TacGacT11AY.570.000656
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.590.00053
ORF1ab/nsp15A1-B114T114TacGacA11AY.590.00053
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.600.000938
ORF1ab/nsp15A1-B114T114TacGacA11AY.600.000938
ORF1ab/nsp15A1-B114T114TacGacT11AY.620.000436
ORF1ab/nsp15A1-B114T114TacGacT11AY.630.000387
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.650.000533
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.650.000533
ORF1ab/nsp15A1-B114T114delACG---11AY.670.000464
ORF1ab/nsp15A1-B114T114TacGacT11AY.680.000274
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.7.10.000113
ORF1ab/nsp15A1-B114T114TacGacT11AY.700.000209
ORF1ab/nsp15A1-B114T114PAcgCcg11AY.700.000209
ORF1ab/nsp15A1-B114T114TacGacT11AY.720.001361
ORF1ab/nsp15A1-B114T114delACG---11AY.840.000437
ORF1ab/nsp15A1-B114T114TacGacT11AY.860.00083
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.890.004902
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.90.000068
ORF1ab/nsp15A1-B114T114TacGacT11AY.9.10.000084
ORF1ab/nsp15A1-B114T114KaCgaAg11AY.9.20.000037
ORF1ab/nsp15A1-B114T114delACG---11AY.9.20.000037
ORF1ab/nsp15A1-B114T114TacGacT11AY.9.2.10.001976
ORF1ab/nsp15A1-B114T114MaCgaTg11AY.98.10.000048
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.98.10.000048
ORF1ab/nsp15A1-B114T114delACG---11AY.990.001049
ORF1ab/nsp15A1-B114T114TacGacT11AY.99.10.001553
ORF1ab/nsp15A1-B114T114AAcgGcg11AY.99.20.000092
ORF1ab/nsp15A1-B114T114TacGacT11AY.99.20.000092
ORF1ab/nsp15A1-B114T114delACG---11AZ.20.000821
ORF1ab/nsp15A1-B114T114MaCgaTg11AZ.30.00152
ORF1ab/nsp15A1-B114T114AAcgGcg11B0.000128
ORF1ab/nsp15A1-B114T114MaCgaTg11B0.000128
ORF1ab/nsp15A1-B114T114KaCgaAg11B.10.000009
ORF1ab/nsp15A1-B114T114VACgGTg11B.10.000009
ORF1ab/nsp15A1-B114T114PAcgCcg11B.10.000009
ORF1ab/nsp15A1-B114T114NaCGaAC11B.10.000009
ORF1ab/nsp15A1-B114T114del1acGac-11B.1.10.000018
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.1.10.000327
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.10.000327
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.100.001115
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.1010.01
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.1290.009174
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.1590.004673
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.1700.001247
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.1910.004762
ORF1ab/nsp15A1-B114T114delACG---11B.1.1.1920.002309
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.2000.007463
ORF1ab/nsp15A1-B114T114TacGacA11B.1.1.2030.016949
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.2050.003717
ORF1ab/nsp15A1-B114T114delACG---11B.1.1.2070.001182
ORF1ab/nsp15A1-B114T114TacGacA11B.1.1.2360.006897
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.2410.00207
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.250.000569
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.2630.001558
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.1.2730.006757
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.2850.006536
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.2880.001916
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.2980.000862
ORF1ab/nsp15A1-B114T114delACG---11B.1.1.3060.000438
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.3060.000438
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.3160.000925
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.1.3220.008772
ORF1ab/nsp15A1-B114T114SAcgTcg11B.1.1.3260.001761
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.3480.000796
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.370.000193
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.3760.005952
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.3830.0625
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.1.3880.045455
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.390.00051
ORF1ab/nsp15A1-B114T114TacGacA11B.1.1.3970.002252
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.4010.066667
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.4090.002833
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.1.4090.002833
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.4210.030303
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.4340.000349
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.440.00241
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.460.004367
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.4640.001473
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.4640.001473
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1.500.000679
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.1.5190.00004
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.1.5260.003546
ORF1ab/nsp15A1-B114T114TacGacC11B.1.1.530.013699
ORF1ab/nsp15A1-B114T114TacGacA11B.1.1.570.011494
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1.590.006494
ORF1ab/nsp15A1-B114T114PAcGCcA11B.1.1.70.000001
ORF1ab/nsp15A1-B114T114DACGGAT11B.1.1.70.000001
ORF1ab/nsp15A1-B114T114VACGGTT11B.1.1.70.000001
ORF1ab/nsp15A1-B114T114IaCGaTT11B.1.1.70.000001
ORF1ab/nsp15A1-B114T114delACG---11B.1.1.700.000341
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1110.001175
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1150.021739
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.1400.018868
ORF1ab/nsp15A1-B114T114TacGacA11B.1.1420.002899
ORF1ab/nsp15A1-B114T114TacGacT11B.1.1450.052632
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.160.290.004219
ORF1ab/nsp15A1-B114T114TacGacT11B.1.177.120.000152
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.177.210.000076
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.177.420.000894
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.177.460.000918
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.177.650.000665
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.177.70.000165
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.177.730.000566
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.177.790.002342
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.177.810.000189
ORF1ab/nsp15A1-B114T114TacGacT11B.1.177.820.000477
ORF1ab/nsp15A1-B114T114delACG---11B.1.1790.003759
ORF1ab/nsp15A1-B114T114del1aCga-g11B.1.20.000009
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.20.000009
ORF1ab/nsp15A1-B114T114RaCgaGg11B.1.20.000009
ORF1ab/nsp15A1-B114T114TacGacT11B.1.2100.002132
ORF1ab/nsp15A1-B114T114TacGacT11B.1.2120.016667
ORF1ab/nsp15A1-B114T114TacGacT11B.1.214.20.0006
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.2210.000071
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.2210.000071
ORF1ab/nsp15A1-B114T114IaCGaTA11B.1.2210.000071
ORF1ab/nsp15A1-B114T114TacGacT11B.1.221.20.004016
ORF1ab/nsp15A1-B114T114delACG---11B.1.2340.000132
ORF1ab/nsp15A1-B114T114TacGacC11B.1.2340.000132
ORF1ab/nsp15A1-B114T114TacGacC11B.1.2350.002519
ORF1ab/nsp15A1-B114T114TacGacA11B.1.2360.002053
ORF1ab/nsp15A1-B114T114TacGacT11B.1.2400.000216
ORF1ab/nsp15A1-B114T114TacGacT11B.1.2410.000812
ORF1ab/nsp15A1-B114T114delACG---11B.1.2430.00007
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.2430.00007
ORF1ab/nsp15A1-B114T114TacGacT11B.1.258.140.00098
ORF1ab/nsp15A1-B114T114TacGacA11B.1.258.50.008772
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.258.60.019608
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.258.70.001912
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.2600.003344
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.2650.001271
ORF1ab/nsp15A1-B114T114TacGacT11B.1.2800.007143
ORF1ab/nsp15A1-B114T114TacGacT11B.1.2840.013158
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.3090.047619
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.3190.003049
ORF1ab/nsp15A1-B114T114TacGacT11B.1.3200.001245
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.350.008475
ORF1ab/nsp15A1-B114T114AAcGGcA11B.1.3510.00003
ORF1ab/nsp15A1-B114T114KaCgaAg11B.1.3510.00003
ORF1ab/nsp15A1-B114T114QACGCAA11B.1.3510.00003
ORF1ab/nsp15A1-B114T114TacGacA11B.1.351.20.000303
ORF1ab/nsp15A1-B114T114TacGacT11B.1.351.30.000876
ORF1ab/nsp15A1-B114T114TacGacT11B.1.3560.001727
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.360.000146
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.36.100.004785
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.36.180.00042
ORF1ab/nsp15A1-B114T114TacGacA11B.1.362.20.004717
ORF1ab/nsp15A1-B114T114TacGacT11B.1.3710.001122
ORF1ab/nsp15A1-B114T114TacGacC11B.1.3960.000706
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.3990.001934
ORF1ab/nsp15A1-B114T114delACG---11B.1.4090.000781
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.4110.003704
ORF1ab/nsp15A1-B114T114delACG---11B.1.416.10.001563
ORF1ab/nsp15A1-B114T114delACG---11B.1.4270.00005
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.4290.000024
ORF1ab/nsp15A1-B114T114TacGacT11B.1.4530.003236
ORF1ab/nsp15A1-B114T114TacGacA11B.1.4560.003268
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.4620.007246
ORF1ab/nsp15A1-B114T114TacGacT11B.1.4700.001404
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.4700.001404
ORF1ab/nsp15A1-B114T114AAcGGcA11B.1.4970.000315
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.4980.020408
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.5020.052632
ORF1ab/nsp15A1-B114T114TacGacA11B.1.5030.002488
ORF1ab/nsp15A1-B114T114delACG---11B.1.5230.002451
ORF1ab/nsp15A1-B114T114delACG---11B.1.5240.001406
ORF1ab/nsp15A1-B114T114SAcgTcg11B.1.5240.001406
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.5370.02
ORF1ab/nsp15A1-B114T114TacGacT11B.1.5610.000397
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.5640.000426
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.5680.001111
ORF1ab/nsp15A1-B114T114TacGacT11B.1.5750.000303
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.5750.000303
ORF1ab/nsp15A1-B114T114delACG---11B.1.5770.000687
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.5880.00091
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.5910.010638
ORF1ab/nsp15A1-B114T114AAcgGcg11B.1.5960.000087
ORF1ab/nsp15A1-B114T114TacGacT11B.1.6000.005848
ORF1ab/nsp15A1-B114T114TacGacT11B.1.6090.000479
ORF1ab/nsp15A1-B114T114MaCgaTg11B.1.6090.000479
ORF1ab/nsp15A1-B114T114delACG---11B.1.617.10.000129
ORF1ab/nsp15A1-B114T114RaCgaGg11B.1.617.20.000004
ORF1ab/nsp15A1-B114T114PAcgCcg11B.1.617.20.000004
ORF1ab/nsp15A1-B114T114delACG---11B.1.6200.000946
ORF1ab/nsp15A1-B114T114delACG---11B.1.6300.005236
ORF1ab/nsp15A1-B114T114TacGacA11B.1.6360.006711
ORF1ab/nsp15A1-B114T114MaCgaTg11B.200.023256
ORF1ab/nsp15A1-B114T114TacGacA11B.30.000831
ORF1ab/nsp15A1-B114T114MaCgaTg11B.40.002208
ORF1ab/nsp15A1-B114T114KaCgaAg11B.400.000364
ORF1ab/nsp15A1-B114T114MaCgaTg11B.400.000364
ORF1ab/nsp15A1-B114T114MaCgaTg11B.470.020408
ORF1ab/nsp15A1-B114T114MaCgaTg11B.60.00091
ORF1ab/nsp15A1-B114T114TacGacT11B.6.60.000889
ORF1ab/nsp15A1-B114T114MaCgaTg11B.6.60.000889
ORF1ab/nsp15A1-B114T114MaCgaTg11B.600.015873
ORF1ab/nsp15A1-B114T114TacGacT11C.250.125
ORF1ab/nsp15A1-B114T114AAcgGcg11C.300.001727
ORF1ab/nsp15A1-B114T114TacGacT11C.360.000911
ORF1ab/nsp15A1-B114T114MaCgaTg11C.36.30.000567
ORF1ab/nsp15A1-B114T114AAcgGcg11C.370.000116
ORF1ab/nsp15A1-B114T114MaCgaTg11D.30.005917
ORF1ab/nsp15A1-B114T114MaCgaTg11N.40.004255
ORF1ab/nsp15A1-B114T114MaCgaTg11N.50.001767
ORF1ab/nsp15A1-B114T114AAcgGcg11N.50.001767
ORF1ab/nsp15A1-B114T114delACG---11P.10.000016
ORF1ab/nsp15A1-B114T114AAcgGcg11P.10.000016
ORF1ab/nsp15A1-B114T114KaCgaAg11P.10.000016
ORF1ab/nsp15A1-B114T114TacGacA11P.1.130.000898
ORF1ab/nsp15A1-B114T114delACG---11P.1.150.000232
ORF1ab/nsp15A1-B114T114MaCgaTg11P.1.160.000374
ORF1ab/nsp15A1-B114T114TacGacT11P.1.70.000319
ORF1ab/nsp15A1-B114T114MaCgaTg11Q.10.000126
ORF1ab/nsp15A1-B114T114delACG---11Q.10.000126
ORF1ab/nsp15A1-B114T114TacGacT11Q.20.000613