CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp15A1-B : CodonNum = 112

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp15A1-B112T112IT6564InonsynaCtaTt780878070.99987219954-19956
ORF1ab/nsp15A1-B112T112IT6564InonsynaCTaTA780810.00012807419954-19956
ORF1ab/nsp15A1-B112T112TT6564TsynacTacC5543290.59386319954-19956
ORF1ab/nsp15A1-B112T112TT6564TsynacTacA5542130.38447719954-19956
ORF1ab/nsp15A1-B112T112TT6564TsynacTacG554120.021660719954-19956
ORF1ab/nsp15A1-B112T112delT6564deldelACT---178178119954-19956
ORF1ab/nsp15A1-B112T112NT6564NnonsynaCtaAt1581550.98101319954-19956
ORF1ab/nsp15A1-B112T112NT6564NnonsynaCTaAC15830.018987319954-19956
ORF1ab/nsp15A1-B112T112AT6564AnonsynActGct33310.93939419954-19956
ORF1ab/nsp15A1-B112T112AT6564AnonsynAcTGcA3310.03030319954-19956
ORF1ab/nsp15A1-B112T112AT6564AnonsynAcTGcC3310.03030319954-19956
ORF1ab/nsp15A1-B112T112ST6564SnonsynActTct1690.562519954-19956
ORF1ab/nsp15A1-B112T112ST6564SnonsynaCtaGt1660.37519954-19956
ORF1ab/nsp15A1-B112T112ST6564SnonsynAcTTcC1610.062519954-19956
ORF1ab/nsp15A1-B112T112del1T6564del1delaCTaT-740.57142919954-19956
ORF1ab/nsp15A1-B112T112del1T6564del1delAct-ct710.14285719954-19956
ORF1ab/nsp15A1-B112T112del1T6564del1delACT-NN710.14285719954-19956
ORF1ab/nsp15A1-B112T112del1T6564del1delaCta-t710.14285719954-19956
ORF1ab/nsp15A1-B112T112PT6564PnonsynAcTCcC630.519954-19956
ORF1ab/nsp15A1-B112T112PT6564PnonsynActCct630.519954-19956
ORF1ab/nsp15A1-B112T112del2T6564del2delACt--t320.66666719954-19956
ORF1ab/nsp15A1-B112T112del2T6564del2delaCTa--310.33333319954-19956
ORF1ab/nsp15A1-B112T112HT6564HnonsynACTCAC22119954-19956
ORF1ab/nsp15A1-B112T112CT6564CnonsynACtTGt22119954-19956
ORF1ab/nsp15A1-B112T112DT6564DnonsynACtGAt22119954-19956
ORF1ab/nsp15A1-B112T112LT6564LnonsynACtCTt210.519954-19956
ORF1ab/nsp15A1-B112T112LT6564LnonsynACTCTG210.519954-19956
ORF1ab/nsp15A1-B112T112RT6564RnonsynACTCGA11119954-19956
ORF1ab/nsp15A1-B112T112FT6564FnonsynACtTTt11119954-19956
ORF1ab/nsp15A1-B112T112KT6564KnonsynaCTaAA11119954-19956
ORF1ab/nsp15A1-B112T112VT6564VnonsynACtGTt11119954-19956

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp15A1-B112T112IaCtaTt78077808All0.001493
ORF1ab/nsp15A1-B112T112IaCTaTA17808All0
ORF1ab/nsp15A1-B112T112IaCtaTt16421643B.1.1.70.00147
ORF1ab/nsp15A1-B112T112IaCTaTA11643B.1.1.70.000001
ORF1ab/nsp15A1-B112T112IaCtaTt15031503AY.40.002339
ORF1ab/nsp15A1-B112T112IaCtaTt876876AY.430.003881
ORF1ab/nsp15A1-B112T112TacTacC329554All0.000063
ORF1ab/nsp15A1-B112T112TacTacA213554All0.000041
ORF1ab/nsp15A1-B112T112TacTacG12554All0.000002
ORF1ab/nsp15A1-B112T112IaCtaTt401401B.1.177.70.066106
ORF1ab/nsp15A1-B112T112IaCtaTt327327AW.10.996951
ORF1ab/nsp15A1-B112T112IaCtaTt312312B.1.20.002747
ORF1ab/nsp15A1-B112T112IaCtaTt275275B.1.617.20.001035
ORF1ab/nsp15A1-B112T112IaCtaTt183183AY.1030.001136
ORF1ab/nsp15A1-B112T112delACT---178178All0.000034
ORF1ab/nsp15A1-B112T112IaCtaTt171171B.1.177.120.025941
ORF1ab/nsp15A1-B112T112NaCtaAt155158All0.00003
ORF1ab/nsp15A1-B112T112NaCTaAC3158All0.000001
ORF1ab/nsp15A1-B112T112IaCtaTt155155AY.3.10.013215
ORF1ab/nsp15A1-B112T112IaCtaTt100100AY.250.000601
ORF1ab/nsp15A1-B112T112TacTacA6695AY.99.20.006082
ORF1ab/nsp15A1-B112T112TacTacC2995AY.99.20.002673
ORF1ab/nsp15A1-B112T112IaCtaTt9090AY.740.010408
ORF1ab/nsp15A1-B112T112IaCtaTt8484AY.270.005437
ORF1ab/nsp15A1-B112T112IaCtaTt7777P.10.001213
ORF1ab/nsp15A1-B112T112IaCtaTt7575B.1.3690.021392
ORF1ab/nsp15A1-B112T112IaCtaTt7373P.1.10.023189
ORF1ab/nsp15A1-B112T112IaCtaTt6969AY.440.00042
ORF1ab/nsp15A1-B112T112IaCtaTt5959B.1.5260.001387
ORF1ab/nsp15A1-B112T112IaCtaTt5757B.10.000522
ORF1ab/nsp15A1-B112T112NaCtaAt5555B.1.4380.359477
ORF1ab/nsp15A1-B112T112IaCtaTt5353B.1.1770.000698
ORF1ab/nsp15A1-B112T112TacTacC2652B.1.617.20.000098
ORF1ab/nsp15A1-B112T112TacTacA2552B.1.617.20.000094
ORF1ab/nsp15A1-B112T112TacTacG152B.1.617.20.000004
ORF1ab/nsp15A1-B112T112IaCtaTt4949AY.1020.001299
ORF1ab/nsp15A1-B112T112IaCtaTt4848AY.330.003205
ORF1ab/nsp15A1-B112T112delACT---4747B.1.1.70.000042
ORF1ab/nsp15A1-B112T112IaCtaTt4747B.1.4290.001106
ORF1ab/nsp15A1-B112T112delACT---4646B.1.20.000405
ORF1ab/nsp15A1-B112T112TacTacA2542B.1.1.70.000022
ORF1ab/nsp15A1-B112T112TacTacC1742B.1.1.70.000015
ORF1ab/nsp15A1-B112T112IaCtaTt4242B.1.2340.005542
ORF1ab/nsp15A1-B112T112IaCtaTt4141B.1.1600.001279
ORF1ab/nsp15A1-B112T112TacTacC2236AY.430.000097
ORF1ab/nsp15A1-B112T112TacTacA1436AY.430.000062
ORF1ab/nsp15A1-B112T112TacTacC3636B.1.177.620.042908
ORF1ab/nsp15A1-B112T112IaCtaTt3535B.1.1.2220.00714
ORF1ab/nsp15A1-B112T112AActGct3133All0.000006
ORF1ab/nsp15A1-B112T112AAcTGcC133All0
ORF1ab/nsp15A1-B112T112AAcTGcA133All0
ORF1ab/nsp15A1-B112T112IaCtaTt3333B.1.10.000599
ORF1ab/nsp15A1-B112T112TacTacC2732AY.440.000164
ORF1ab/nsp15A1-B112T112TacTacA532AY.440.00003
ORF1ab/nsp15A1-B112T112IaCtaTt3232AY.98.10.00155
ORF1ab/nsp15A1-B112T112IaCtaTt3030AY.1190.001059
ORF1ab/nsp15A1-B112T112IaCtaTt2626B.1.1.4640.038292
ORF1ab/nsp15A1-B112T112TacTacC2525AY.1020.000663
ORF1ab/nsp15A1-B112T112IaCtaTt2525AY.30.000249
ORF1ab/nsp15A1-B112T112IaCtaTt2525AY.390.000618
ORF1ab/nsp15A1-B112T112TacTacC2323AY.1190.000812
ORF1ab/nsp15A1-B112T112IaCtaTt2222B.1.2410.017857
ORF1ab/nsp15A1-B112T112NaCtaAt2121AY.40.000033
ORF1ab/nsp15A1-B112T112TacTacA1521AY.40.000023
ORF1ab/nsp15A1-B112T112TacTacC621AY.40.000009
ORF1ab/nsp15A1-B112T112IaCtaTt2121B.1.360.003064
ORF1ab/nsp15A1-B112T112TacTacA2020AY.290.000315
ORF1ab/nsp15A1-B112T112IaCtaTt2020B.1.2210.001421
ORF1ab/nsp15A1-B112T112IaCtaTt1919B.1.2430.001322
ORF1ab/nsp15A1-B112T112IaCtaTt1717AY.260.000481
ORF1ab/nsp15A1-B112T112IaCtaTt1717AY.290.000268
ORF1ab/nsp15A1-B112T112IaCtaTt1717AY.4.20.000369
ORF1ab/nsp15A1-B112T112IaCtaTt1717AY.50.000351
ORF1ab/nsp15A1-B112T112SActTct916All0.000002
ORF1ab/nsp15A1-B112T112SaCtaGt616All0.000001
ORF1ab/nsp15A1-B112T112SAcTTcC116All0
ORF1ab/nsp15A1-B112T112TacTacA1116AY.1030.000068
ORF1ab/nsp15A1-B112T112TacTacC516AY.1030.000031
ORF1ab/nsp15A1-B112T112IaCtaTt1616AY.9.10.00134
ORF1ab/nsp15A1-B112T112IaCtaTt1414AY.1000.000644
ORF1ab/nsp15A1-B112T112IaCtaTt1414B.1.177.440.007265
ORF1ab/nsp15A1-B112T112IaCtaTt1414B.1.177.820.006683
ORF1ab/nsp15A1-B112T112NaCtaAt1414B.1.20.000123
ORF1ab/nsp15A1-B112T112TacTacC1414B.6.60.012444
ORF1ab/nsp15A1-B112T112IaCtaTt1313A0.005031
ORF1ab/nsp15A1-B112T112IaCtaTt1313AY.1200.000483
ORF1ab/nsp15A1-B112T112IaCtaTt1313AY.120.10.004173
ORF1ab/nsp15A1-B112T112IaCtaTt1313B.1.3510.000386
ORF1ab/nsp15A1-B112T112IaCtaTt1313B.1.4270.000656
ORF1ab/nsp15A1-B112T112NaCtaAt1212AY.290.000189
ORF1ab/nsp15A1-B112T112IaCtaTt1212B.1.1.2980.010345
ORF1ab/nsp15A1-B112T112IaCtaTt1212B.1.177.180.013921
ORF1ab/nsp15A1-B112T112IaCtaTt1111AY.1210.001488
ORF1ab/nsp15A1-B112T112IaCtaTt1111AY.230.000767
ORF1ab/nsp15A1-B112T112IaCtaTt1111AY.450.001339
ORF1ab/nsp15A1-B112T112IaCtaTt1111B.1.6210.000974
ORF1ab/nsp15A1-B112T112TacTacC1010AU.10.012658
ORF1ab/nsp15A1-B112T112IaCtaTt99AY.420.000362
ORF1ab/nsp15A1-B112T112IaCtaTt99AY.9.20.000331
ORF1ab/nsp15A1-B112T112IaCtaTt99B.1.1.2140.000499
ORF1ab/nsp15A1-B112T112IaCtaTt99B.1.2930.1125
ORF1ab/nsp15A1-B112T112IaCtaTt88AY.200.000311
ORF1ab/nsp15A1-B112T112TacTacC78AY.250.000042
ORF1ab/nsp15A1-B112T112TacTacG18AY.250.000006
ORF1ab/nsp15A1-B112T112AActGct88AY.40.000012
ORF1ab/nsp15A1-B112T112IaCtaTt88AY.920.002298
ORF1ab/nsp15A1-B112T112IaCtaTt88B.1.1.3180.002414
ORF1ab/nsp15A1-B112T112IaCtaTt88B.1.177.600.001747
ORF1ab/nsp15A1-B112T112IaCtaTt88B.1.177.750.008325
ORF1ab/nsp15A1-B112T112TacTacC78B.1.2580.000466
ORF1ab/nsp15A1-B112T112TacTacA18B.1.2580.000067
ORF1ab/nsp15A1-B112T112delACT---88B.1.3510.000238
ORF1ab/nsp15A1-B112T112IaCtaTt88D.20.0006
ORF1ab/nsp15A1-B112T112del1aCTaT-47All0.000001
ORF1ab/nsp15A1-B112T112del1ACT-NN17All0
ORF1ab/nsp15A1-B112T112del1Act-ct17All0
ORF1ab/nsp15A1-B112T112del1aCta-t17All0
ORF1ab/nsp15A1-B112T112IaCtaTt77AY.340.000679
ORF1ab/nsp15A1-B112T112IaCtaTt77AY.460.000729
ORF1ab/nsp15A1-B112T112IaCtaTt77AY.470.000218
ORF1ab/nsp15A1-B112T112IaCtaTt77AY.99.20.000645
ORF1ab/nsp15A1-B112T112TacTacC77B.1.1.170.116667
ORF1ab/nsp15A1-B112T112IaCtaTt77B.1.1.5190.000278
ORF1ab/nsp15A1-B112T112IaCtaTt77B.1.1280.004447
ORF1ab/nsp15A1-B112T112IaCtaTt77B.1.466.20.002739
ORF1ab/nsp15A1-B112T112delACT---77B.1.5260.000165
ORF1ab/nsp15A1-B112T112IaCtaTt77B.1.5610.002779
ORF1ab/nsp15A1-B112T112PActCct36All0.000001
ORF1ab/nsp15A1-B112T112PAcTCcC36All0.000001
ORF1ab/nsp15A1-B112T112IaCtaTt66AY.300.002374
ORF1ab/nsp15A1-B112T112IaCtaTt66AY.360.000889
ORF1ab/nsp15A1-B112T112NaCtaAt66AY.430.000027
ORF1ab/nsp15A1-B112T112IaCtaTt66AY.980.000474
ORF1ab/nsp15A1-B112T112delACT---66B.10.000055
ORF1ab/nsp15A1-B112T112TacTacC46B.10.000037
ORF1ab/nsp15A1-B112T112TacTacA26B.10.000018
ORF1ab/nsp15A1-B112T112TacTacC66P.10.000095
ORF1ab/nsp15A1-B112T112IaCtaTt66P.1.100.001617
ORF1ab/nsp15A1-B112T112IaCtaTt55AY.1130.000712
ORF1ab/nsp15A1-B112T112IaCtaTt55AY.1170.000423
ORF1ab/nsp15A1-B112T112IaCtaTt55AY.1180.000313
ORF1ab/nsp15A1-B112T112TacTacA55AY.390.000124
ORF1ab/nsp15A1-B112T112TacTacG45AY.50.000083
ORF1ab/nsp15A1-B112T112TacTacC15AY.50.000021
ORF1ab/nsp15A1-B112T112IaCtaTt55AY.750.00028
ORF1ab/nsp15A1-B112T112TacTacC55B.1.1.1890.007564
ORF1ab/nsp15A1-B112T112IaCtaTt55B.1.177.430.007386
ORF1ab/nsp15A1-B112T112TacTacG25B.1.20.000018
ORF1ab/nsp15A1-B112T112TacTacA25B.1.20.000018
ORF1ab/nsp15A1-B112T112TacTacC15B.1.20.000009
ORF1ab/nsp15A1-B112T112TacTacC55B.1.4270.000252
ORF1ab/nsp15A1-B112T112delACT---55B.1.4290.000118
ORF1ab/nsp15A1-B112T112delACT---55B.1.5960.000436
ORF1ab/nsp15A1-B112T112IaCtaTt55B.1.6370.000365
ORF1ab/nsp15A1-B112T112IaCtaTt55P.1.70.001596
ORF1ab/nsp15A1-B112T112IaCtaTt44A.2.50.001996
ORF1ab/nsp15A1-B112T112TacTacC44AY.1000.000184
ORF1ab/nsp15A1-B112T112IaCtaTt44AY.140.000352
ORF1ab/nsp15A1-B112T112delACT---44AY.30.00004
ORF1ab/nsp15A1-B112T112NaCtaAt34B.10.000027
ORF1ab/nsp15A1-B112T112NaCTaAC14B.10.000009
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.1.330.001684
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.1.3540.017544
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.1.3720.002755
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.1.630.001543
ORF1ab/nsp15A1-B112T112AActGct44B.1.1.70.000004
ORF1ab/nsp15A1-B112T112NaCtaAt44B.1.4080.01476
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.438.10.000429
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.5640.001704
ORF1ab/nsp15A1-B112T112IaCtaTt44B.1.5960.000349
ORF1ab/nsp15A1-B112T112NaCtaAt44B.1.617.20.000015
ORF1ab/nsp15A1-B112T112IaCtaTt44C.370.000464
ORF1ab/nsp15A1-B112T112IaCtaTt44P.1.150.000929
ORF1ab/nsp15A1-B112T112del2ACt--t23All0
ORF1ab/nsp15A1-B112T112del2aCTa--13All0
ORF1ab/nsp15A1-B112T112IaCtaTt33AY.1090.002219
ORF1ab/nsp15A1-B112T112SActTct33AY.30.00003
ORF1ab/nsp15A1-B112T112NaCtaAt33AY.330.0002
ORF1ab/nsp15A1-B112T112NaCtaAt33AY.4.20.000065
ORF1ab/nsp15A1-B112T112delACT---33AY.430.000013
ORF1ab/nsp15A1-B112T112NaCtaAt33AY.440.000018
ORF1ab/nsp15A1-B112T112IaCtaTt33AY.650.001599
ORF1ab/nsp15A1-B112T112SaCtaGt33B.10.000027
ORF1ab/nsp15A1-B112T112NaCtaAt33B.1.10.000054
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.1.1570.00274
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.1.2160.002671
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.1.2200.005576
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.160.80.003866
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.177.100.002634
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.2810.065217
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.4040.003906
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.4530.009709
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.4700.004213
ORF1ab/nsp15A1-B112T112delACT---33B.1.5170.001281
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.5820.001472
ORF1ab/nsp15A1-B112T112IaCtaTt33B.1.6090.001438
ORF1ab/nsp15A1-B112T112delACT---33B.1.617.20.000011
ORF1ab/nsp15A1-B112T112AActGct23B.1.617.20.000008
ORF1ab/nsp15A1-B112T112AAcTGcC13B.1.617.20.000004
ORF1ab/nsp15A1-B112T112IaCtaTt33Q.20.00184
ORF1ab/nsp15A1-B112T112IaCtaTt33Q.30.000435
ORF1ab/nsp15A1-B112T112IaCtaTt33Q.80.000495
ORF1ab/nsp15A1-B112T112DACtGAt220.111111
ORF1ab/nsp15A1-B112T112NaCTaAC220.111111
ORF1ab/nsp15A1-B112T112AActGct220.111111
ORF1ab/nsp15A1-B112T112DACtGAt22All0
ORF1ab/nsp15A1-B112T112HACTCAC22All0
ORF1ab/nsp15A1-B112T112CACtTGt22All0
ORF1ab/nsp15A1-B112T112LACTCTG12All0
ORF1ab/nsp15A1-B112T112LACtCTt12All0
ORF1ab/nsp15A1-B112T112TacTacC22AU.20.004843
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.10.000791
ORF1ab/nsp15A1-B112T112TacTacC22AY.1050.001286
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.1140.000462
ORF1ab/nsp15A1-B112T112delACT---22AY.1200.000074
ORF1ab/nsp15A1-B112T112TacTacA12AY.1200.000037
ORF1ab/nsp15A1-B112T112TacTacC12AY.1200.000037
ORF1ab/nsp15A1-B112T112delACT---22AY.1210.000271
ORF1ab/nsp15A1-B112T112TacTacC22AY.20.000712
ORF1ab/nsp15A1-B112T112NaCtaAt22AY.200.000078
ORF1ab/nsp15A1-B112T112NaCtaAt22AY.230.000139
ORF1ab/nsp15A1-B112T112NaCtaAt22AY.30.00002
ORF1ab/nsp15A1-B112T112TacTacC12AY.340.000097
ORF1ab/nsp15A1-B112T112TacTacG12AY.340.000097
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.34.10.00102
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.39.10.000079
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.4.2.10.000298
ORF1ab/nsp15A1-B112T112NaCtaAt22AY.4.50.000215
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.410.000588
ORF1ab/nsp15A1-B112T112SActTct12AY.430.000004
ORF1ab/nsp15A1-B112T112SAcTTcC12AY.430.000004
ORF1ab/nsp15A1-B112T112delACT---22AY.440.000012
ORF1ab/nsp15A1-B112T112PAcTCcC12AY.46.60.000072
ORF1ab/nsp15A1-B112T112PActCct12AY.46.60.000072
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.5.30.000675
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.60.000082
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.610.00021
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.620.000871
ORF1ab/nsp15A1-B112T112TacTacA22AY.70.000392
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.710.00095
ORF1ab/nsp15A1-B112T112IaCtaTt22AY.880.001768
ORF1ab/nsp15A1-B112T112TacTacA22AY.98.10.000097
ORF1ab/nsp15A1-B112T112AActGct22B.10.000018
ORF1ab/nsp15A1-B112T112delACT---22B.1.10.000036
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.1680.052632
ORF1ab/nsp15A1-B112T112delACT---22B.1.1.1740.006757
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.1800.021505
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.2070.002364
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.250.001137
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.2840.000215
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.3060.000877
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.3160.00185
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.3170.000823
ORF1ab/nsp15A1-B112T112AAcTGcA12B.1.1.3260.001761
ORF1ab/nsp15A1-B112T112AActGct12B.1.1.3260.001761
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.3510.005587
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.4110.029412
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.4340.000697
ORF1ab/nsp15A1-B112T112TacTacA12B.1.1.5190.00004
ORF1ab/nsp15A1-B112T112TacTacC12B.1.1.5190.00004
ORF1ab/nsp15A1-B112T112NaCtaAt22B.1.1.70.000002
ORF1ab/nsp15A1-B112T112CACtTGt22B.1.1.70.000002
ORF1ab/nsp15A1-B112T112del2aCTa--12B.1.1.70.000001
ORF1ab/nsp15A1-B112T112del2ACt--t12B.1.1.70.000001
ORF1ab/nsp15A1-B112T112del1ACT-NN12B.1.1.70.000001
ORF1ab/nsp15A1-B112T112del1aCTaT-12B.1.1.70.000001
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1.80.007168
ORF1ab/nsp15A1-B112T112NaCtaAt22B.1.1600.000062
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.177.350.001382
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.177.730.001133
ORF1ab/nsp15A1-B112T112TacTacC22B.1.177.750.002081
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.177.860.000367
ORF1ab/nsp15A1-B112T112AActGct22B.1.177.90.002663
ORF1ab/nsp15A1-B112T112TacTacA22B.1.1890.008584
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.1890.008584
ORF1ab/nsp15A1-B112T112AActGct22B.1.20.000018
ORF1ab/nsp15A1-B112T112SActTct12B.1.20.000009
ORF1ab/nsp15A1-B112T112SaCtaGt12B.1.20.000009
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.2140.007326
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.221.40.008333
ORF1ab/nsp15A1-B112T112TacTacA22B.1.2340.000264
ORF1ab/nsp15A1-B112T112delACT---22B.1.2580.000133
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.36.290.001035
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.36.380.003284
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.4200.020833
ORF1ab/nsp15A1-B112T112TacTacC22B.1.4290.000047
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.4560.006536
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.5250.000226
ORF1ab/nsp15A1-B112T112TacTacC22B.1.5260.000047
ORF1ab/nsp15A1-B112T112AActGct22B.1.5260.000047
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.564.10.003155
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.5680.002222
ORF1ab/nsp15A1-B112T112TacTacC22B.1.5820.000981
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.617.10.000258
ORF1ab/nsp15A1-B112T112del1aCTaT-22B.1.617.20.000008
ORF1ab/nsp15A1-B112T112SaCtaGt12B.1.617.20.000004
ORF1ab/nsp15A1-B112T112SActTct12B.1.617.20.000004
ORF1ab/nsp15A1-B112T112IaCtaTt22B.1.621.10.001012
ORF1ab/nsp15A1-B112T112TacTacC22B.1.6370.000146
ORF1ab/nsp15A1-B112T112TacTacA22B.1.930.001867
ORF1ab/nsp15A1-B112T112IaCtaTt22B.400.000729
ORF1ab/nsp15A1-B112T112IaCtaTt22C.36.30.001134
ORF1ab/nsp15A1-B112T112IaCtaTt22N.50.003534
ORF1ab/nsp15A1-B112T112IaCtaTt22P.1.20.002312
ORF1ab/nsp15A1-B112T112TacTacC22P.20.000373
ORF1ab/nsp15A1-B112T112IaCtaTt22P.30.00319
ORF1ab/nsp15A1-B112T112IaCtaTt11A.2.5.20.001572
ORF1ab/nsp15A1-B112T112TacTacC11AD.20.000219
ORF1ab/nsp15A1-B112T112IaCtaTt11AL.10.012987
ORF1ab/nsp15A1-B112T112VACtGTt11All0
ORF1ab/nsp15A1-B112T112KaCTaAA11All0
ORF1ab/nsp15A1-B112T112FACtTTt11All0
ORF1ab/nsp15A1-B112T112RACTCGA11All0
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.100.00053
ORF1ab/nsp15A1-B112T112delACT---11AY.1000.000046
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.1010.00049
ORF1ab/nsp15A1-B112T112del1aCTaT-11AY.1020.000027
ORF1ab/nsp15A1-B112T112TacTacC11AY.1070.000466
ORF1ab/nsp15A1-B112T112delACT---11AY.1070.000466
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.1100.000113
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.1110.000183
ORF1ab/nsp15A1-B112T112delACT---11AY.1130.000142
ORF1ab/nsp15A1-B112T112TacTacA11AY.1170.000085
ORF1ab/nsp15A1-B112T112NaCtaAt11AY.1170.000085
ORF1ab/nsp15A1-B112T112PActCct11AY.1190.000035
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.120.000316
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.20.000356
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.23.10.000417
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.240.000431
ORF1ab/nsp15A1-B112T112delACT---11AY.250.000006
ORF1ab/nsp15A1-B112T112NaCtaAt11AY.260.000028
ORF1ab/nsp15A1-B112T112TacTacC11AY.260.000028
ORF1ab/nsp15A1-B112T112TacTacC11AY.30.00001
ORF1ab/nsp15A1-B112T112TacTacC11AY.3.10.000085
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.320.000532
ORF1ab/nsp15A1-B112T112TacTacC11AY.380.000499
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.4.50.000107
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.400.000964
ORF1ab/nsp15A1-B112T112AActGct11AY.420.00004
ORF1ab/nsp15A1-B112T112PAcTCcC11AY.430.000004
ORF1ab/nsp15A1-B112T112del1Act-ct11AY.430.000004
ORF1ab/nsp15A1-B112T112AActGct11AY.440.000006
ORF1ab/nsp15A1-B112T112FACtTTt11AY.440.000006
ORF1ab/nsp15A1-B112T112TacTacA11AY.450.000122
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.46.40.000165
ORF1ab/nsp15A1-B112T112HACTCAC11AY.46.60.000072
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.46.60.000072
ORF1ab/nsp15A1-B112T112TacTacA11AY.470.000031
ORF1ab/nsp15A1-B112T112delACT---11AY.470.000031
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.5.40.000277
ORF1ab/nsp15A1-B112T112NaCtaAt11AY.540.000095
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.540.000095
ORF1ab/nsp15A1-B112T112delACT---11AY.550.000917
ORF1ab/nsp15A1-B112T112NaCtaAt11AY.550.000917
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.570.000656
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.670.000464
ORF1ab/nsp15A1-B112T112RACTCGA11AY.670.000464
ORF1ab/nsp15A1-B112T112TacTacC11AY.680.000274
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.7.10.000113
ORF1ab/nsp15A1-B112T112TacTacA11AY.740.000116
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.75.10.00018
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.790.001211
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.840.000437
ORF1ab/nsp15A1-B112T112delACT---11AY.840.000437
ORF1ab/nsp15A1-B112T112TacTacC11AY.840.000437
ORF1ab/nsp15A1-B112T112TacTacA11AY.850.000427
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.90.000068
ORF1ab/nsp15A1-B112T112AActGct11AY.9.20.000037
ORF1ab/nsp15A1-B112T112TacTacA11AY.9.20.000037
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.910.00073
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.970.001701
ORF1ab/nsp15A1-B112T112IaCtaTt11AY.990.001049
ORF1ab/nsp15A1-B112T112delACT---11AY.990.001049
ORF1ab/nsp15A1-B112T112TacTacG11AY.990.001049
ORF1ab/nsp15A1-B112T112delACT---11AZ.20.000821
ORF1ab/nsp15A1-B112T112SActTct11AZ.20.000821
ORF1ab/nsp15A1-B112T112del1aCta-t11B.10.000009
ORF1ab/nsp15A1-B112T112HACTCAC11B.10.000009
ORF1ab/nsp15A1-B112T112PAcTCcC11B.10.000009
ORF1ab/nsp15A1-B112T112TacTacC11B.1.10.000018
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.100.001115
ORF1ab/nsp15A1-B112T112delACT---11B.1.1.1920.002309
ORF1ab/nsp15A1-B112T112TacTacC11B.1.1.2040.00304
ORF1ab/nsp15A1-B112T112delACT---11B.1.1.2070.001182
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.1.2140.000055
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.280.000311
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.2890.002083
ORF1ab/nsp15A1-B112T112delACT---11B.1.1.3060.000438
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.3120.001912
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.1.3170.000412
ORF1ab/nsp15A1-B112T112TacTacA11B.1.1.3260.001761
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.3330.001076
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.3430.020833
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.3680.003086
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.370.000193
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.500.000679
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.1.5000.02
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.5210.005348
ORF1ab/nsp15A1-B112T112SActTct11B.1.1.70.000001
ORF1ab/nsp15A1-B112T112KaCTaAA11B.1.1.70.000001
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1.700.000341
ORF1ab/nsp15A1-B112T112delACT---11B.1.1.700.000341
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.110.30.000718
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1120.005181
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.130.002375
ORF1ab/nsp15A1-B112T112TacTacC11B.1.160.260.002421
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.160.320.004292
ORF1ab/nsp15A1-B112T112TacTacA11B.1.1770.000013
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.177.160.000664
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.177.210.000076
ORF1ab/nsp15A1-B112T112TacTacC11B.1.177.330.001645
ORF1ab/nsp15A1-B112T112AActGct11B.1.177.400.005155
ORF1ab/nsp15A1-B112T112TacTacC11B.1.177.440.000519
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.177.500.004695
ORF1ab/nsp15A1-B112T112TacTacC11B.1.177.80.000752
ORF1ab/nsp15A1-B112T112delACT---11B.1.1790.003759
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.1990.004132
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.2210.000071
ORF1ab/nsp15A1-B112T112delACT---11B.1.2340.000132
ORF1ab/nsp15A1-B112T112TacTacC11B.1.2430.00007
ORF1ab/nsp15A1-B112T112delACT---11B.1.2430.00007
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.2580.000067
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.258.30.001675
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.258.90.005
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.2800.007143
ORF1ab/nsp15A1-B112T112TacTacA11B.1.30.002618
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.3110.000275
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.3290.000608
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.3400.004292
ORF1ab/nsp15A1-B112T112del2ACt--t11B.1.3510.00003
ORF1ab/nsp15A1-B112T112AActGct11B.1.3510.00003
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.351.20.000303
ORF1ab/nsp15A1-B112T112delACT---11B.1.36.10.00114
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.36.170.000494
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.3890.001002
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.3980.002976
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.4090.000781
ORF1ab/nsp15A1-B112T112delACT---11B.1.4090.000781
ORF1ab/nsp15A1-B112T112TacTacC11B.1.4090.000781
ORF1ab/nsp15A1-B112T112delACT---11B.1.416.10.001563
ORF1ab/nsp15A1-B112T112delACT---11B.1.4270.00005
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.4290.000024
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.4500.011364
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.4970.000315
ORF1ab/nsp15A1-B112T112TacTacG11B.1.4970.000315
ORF1ab/nsp15A1-B112T112delACT---11B.1.5230.002451
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.5240.001406
ORF1ab/nsp15A1-B112T112delACT---11B.1.5240.001406
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.5400.009709
ORF1ab/nsp15A1-B112T112TacTacC11B.1.5600.00463
ORF1ab/nsp15A1-B112T112SaCtaGt11B.1.5680.001111
ORF1ab/nsp15A1-B112T112TacTacC11B.1.5750.000303
ORF1ab/nsp15A1-B112T112delACT---11B.1.5770.000687
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.5950.000261
ORF1ab/nsp15A1-B112T112TacTacC11B.1.6090.000479
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.6100.003546
ORF1ab/nsp15A1-B112T112delACT---11B.1.617.10.000129
ORF1ab/nsp15A1-B112T112LACTCTG11B.1.617.10.000129
ORF1ab/nsp15A1-B112T112VACtGTt11B.1.617.20.000004
ORF1ab/nsp15A1-B112T112delACT---11B.1.6200.000946
ORF1ab/nsp15A1-B112T112delACT---11B.1.6300.005236
ORF1ab/nsp15A1-B112T112NaCtaAt11B.1.6310.003367
ORF1ab/nsp15A1-B112T112IaCtaTt11B.1.960.018868
ORF1ab/nsp15A1-B112T112IaCtaTt11B.30.000831
ORF1ab/nsp15A1-B112T112TacTacA11C.370.000116
ORF1ab/nsp15A1-B112T112SActTct11D.20.000075
ORF1ab/nsp15A1-B112T112TacTacC11D.20.000075
ORF1ab/nsp15A1-B112T112PActCct11D.20.000075
ORF1ab/nsp15A1-B112T112IaCtaTt11N.40.004255
ORF1ab/nsp15A1-B112T112delACT---11P.10.000016
ORF1ab/nsp15A1-B112T112AActGct11P.10.000016
ORF1ab/nsp15A1-B112T112IaCtaTt11P.1.10.10.00813
ORF1ab/nsp15A1-B112T112TacTacC11P.1.150.000232
ORF1ab/nsp15A1-B112T112delACT---11P.1.150.000232
ORF1ab/nsp15A1-B112T112IaCtaTt11P.1.160.000374
ORF1ab/nsp15A1-B112T112IaCtaTt11P.20.000187
ORF1ab/nsp15A1-B112T112LACtCTt11P.30.001595
ORF1ab/nsp15A1-B112T112IaCtaTt11P.40.003802
ORF1ab/nsp15A1-B112T112IaCtaTt11Q.10.000126
ORF1ab/nsp15A1-B112T112delACT---11Q.10.000126
ORF1ab/nsp15A1-B112T112TacTacG11Q.30.000145
ORF1ab/nsp15A1-B112T112IaCtaTt11R.10.00009