CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = Y494del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B494Y494del2Y6419del2delTAt--t430.7519519-19521
ORF1ab/nsp14A2-B494Y494del2Y6419del2delTAT--N410.2519519-19521

Details of the mutation Y494del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B494Y494del2TAt--t34All0.000001
ORF1ab/nsp14A2-B494Y494del2TAT--N14All0
ORF1ab/nsp14A2-B494Y494del2TAT--N11AY.250.000006
ORF1ab/nsp14A2-B494Y494del2TAt--t11AY.440.000006
ORF1ab/nsp14A2-B494Y494del2TAt--t11B.10.000009
ORF1ab/nsp14A2-B494Y494del2TAt--t11B.1.1770.000013