CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = S374F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B374S374FS6299FnonsyntCttTt2820228202119159-19161

Details of the mutation S374F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B374S374FtCttTt2820228202All0.005394
ORF1ab/nsp14A2-B374S374FtCttTt1122511225AY.140.987942
ORF1ab/nsp14A2-B374S374FtCttTt99759975AY.540.951087
ORF1ab/nsp14A2-B374S374FtCttTt31803180AY.116.10.990346
ORF1ab/nsp14A2-B374S374FtCttTt15061506B.1.617.20.005671
ORF1ab/nsp14A2-B374S374FtCttTt449449AY.150.997778
ORF1ab/nsp14A2-B374S374FtCttTt182182AY.1160.052194
ORF1ab/nsp14A2-B374S374FtCttTt142142B.1.5260.003338
ORF1ab/nsp14A2-B374S374FtCttTt115115AY.130.018513
ORF1ab/nsp14A2-B374S374FtCttTt104104AY.30.001034
ORF1ab/nsp14A2-B374S374FtCttTt9292B.1.1.70.000082
ORF1ab/nsp14A2-B374S374FtCttTt8585AY.190.096921
ORF1ab/nsp14A2-B374S374FtCttTt8383AY.440.000505
ORF1ab/nsp14A2-B374S374FtCttTt7272AY.380.035946
ORF1ab/nsp14A2-B374S374FtCttTt6464B.10.000586
ORF1ab/nsp14A2-B374S374FtCttTt4646AY.1030.000286
ORF1ab/nsp14A2-B374S374FtCttTt4646AY.980.003634
ORF1ab/nsp14A2-B374S374FtCttTt4545B.1.20.000396
ORF1ab/nsp14A2-B374S374FtCttTt4040AY.640.02381
ORF1ab/nsp14A2-B374S374FtCttTt3232B.1.1770.000421
ORF1ab/nsp14A2-B374S374FtCttTt2525AY.40.000039
ORF1ab/nsp14A2-B374S374FtCttTt2424AY.650.012793
ORF1ab/nsp14A2-B374S374FtCttTt2323B.1.177.860.004219
ORF1ab/nsp14A2-B374S374FtCttTt2323P.10.000362
ORF1ab/nsp14A2-B374S374FtCttTt2222AY.430.000097
ORF1ab/nsp14A2-B374S374FtCttTt1919AY.750.001064
ORF1ab/nsp14A2-B374S374FtCttTt1818AY.390.000445
ORF1ab/nsp14A2-B374S374FtCttTt1818AY.75.10.003246
ORF1ab/nsp14A2-B374S374FtCttTt1616AY.1140.003698
ORF1ab/nsp14A2-B374S374FtCttTt1616AY.620.006972
ORF1ab/nsp14A2-B374S374FtCttTt1515AY.1050.009646
ORF1ab/nsp14A2-B374S374FtCttTt1515AY.250.00009
ORF1ab/nsp14A2-B374S374FtCttTt1515AY.480.006977
ORF1ab/nsp14A2-B374S374FtCttTt1414AY.510.012727
ORF1ab/nsp14A2-B374S374FtCttTt1313AY.520.010586
ORF1ab/nsp14A2-B374S374FtCttTt1313AY.780.020031
ORF1ab/nsp14A2-B374S374FtCttTt1212AY.1170.001014
ORF1ab/nsp14A2-B374S374FtCttTt1212AY.160.004556
ORF1ab/nsp14A2-B374S374FtCttTt1212AY.460.001249
ORF1ab/nsp14A2-B374S374FtCttTt1111AY.470.000342
ORF1ab/nsp14A2-B374S374FtCttTt1010AY.50.000206
ORF1ab/nsp14A2-B374S374FtCttTt1010AY.7.10.001127
ORF1ab/nsp14A2-B374S374FtCttTt1010B.1.10.000181
ORF1ab/nsp14A2-B374S374FtCttTt99AY.16.10.004229
ORF1ab/nsp14A2-B374S374FtCttTt99AY.99.20.000829
ORF1ab/nsp14A2-B374S374FtCttTt99B.1.3510.000268
ORF1ab/nsp14A2-B374S374FtCttTt99B.1.5750.002731
ORF1ab/nsp14A2-B374S374FtCttTt88AY.1020.000212
ORF1ab/nsp14A2-B374S374FtCttTt88AY.610.000838
ORF1ab/nsp14A2-B374S374FtCttTt88AY.920.002298
ORF1ab/nsp14A2-B374S374FtCttTt88B.1.4080.02952
ORF1ab/nsp14A2-B374S374FtCttTt77AE.80.003423
ORF1ab/nsp14A2-B374S374FtCttTt77AY.290.00011
ORF1ab/nsp14A2-B374S374FtCttTt77AY.330.000467
ORF1ab/nsp14A2-B374S374FtCttTt77AY.490.022364
ORF1ab/nsp14A2-B374S374FtCttTt77AY.840.003062
ORF1ab/nsp14A2-B374S374FtCttTt77B.1.177.70.001154
ORF1ab/nsp14A2-B374S374FtCttTt77B.1.351.30.006135
ORF1ab/nsp14A2-B374S374FtCttTt66AY.5.40.00166
ORF1ab/nsp14A2-B374S374FtCttTt66AY.590.003178
ORF1ab/nsp14A2-B374S374FtCttTt66AY.680.001642
ORF1ab/nsp14A2-B374S374FtCttTt66AY.770.006764
ORF1ab/nsp14A2-B374S374FtCttTt66AY.9.20.00022
ORF1ab/nsp14A2-B374S374FtCttTt66B0.000767
ORF1ab/nsp14A2-B374S374FtCttTt66B.1.1.5190.000238
ORF1ab/nsp14A2-B374S374FtCttTt55AY.100.00265
ORF1ab/nsp14A2-B374S374FtCttTt55AY.1100.000563
ORF1ab/nsp14A2-B374S374FtCttTt55AY.1200.000186
ORF1ab/nsp14A2-B374S374FtCttTt55AY.260.000142
ORF1ab/nsp14A2-B374S374FtCttTt55AY.60.000206
ORF1ab/nsp14A2-B374S374FtCttTt55AY.810.00996
ORF1ab/nsp14A2-B374S374FtCttTt55B.1.1.3180.001509
ORF1ab/nsp14A2-B374S374FtCttTt55B.1.4290.000118
ORF1ab/nsp14A2-B374S374FtCttTt44AY.230.000279
ORF1ab/nsp14A2-B374S374FtCttTt44AY.450.000487
ORF1ab/nsp14A2-B374S374FtCttTt44AY.500.003197
ORF1ab/nsp14A2-B374S374FtCttTt44AY.550.00367
ORF1ab/nsp14A2-B374S374FtCttTt44B.1.2430.000278
ORF1ab/nsp14A2-B374S374FtCttTt44B.1.2580.000266
ORF1ab/nsp14A2-B374S374FtCttTt33AY.1190.000106
ORF1ab/nsp14A2-B374S374FtCttTt33AY.420.000121
ORF1ab/nsp14A2-B374S374FtCttTt33AY.5.30.001012
ORF1ab/nsp14A2-B374S374FtCttTt33AY.660.003209
ORF1ab/nsp14A2-B374S374FtCttTt33AY.850.001282
ORF1ab/nsp14A2-B374S374FtCttTt33AY.860.00249
ORF1ab/nsp14A2-B374S374FtCttTt33AY.870.002498
ORF1ab/nsp14A2-B374S374FtCttTt33B.1.1.2220.000612
ORF1ab/nsp14A2-B374S374FtCttTt33B.1.1260.003827
ORF1ab/nsp14A2-B374S374FtCttTt33B.1.160.240.013274
ORF1ab/nsp14A2-B374S374FtCttTt33B.1.6370.000219
ORF1ab/nsp14A2-B374S374FtCttTt33R.10.00027
ORF1ab/nsp14A2-B374S374FtCttTt220.111111
ORF1ab/nsp14A2-B374S374FtCttTt22AY.1060.00067
ORF1ab/nsp14A2-B374S374FtCttTt22AY.1210.000271
ORF1ab/nsp14A2-B374S374FtCttTt22AY.240.000862
ORF1ab/nsp14A2-B374S374FtCttTt22AY.3.10.000171
ORF1ab/nsp14A2-B374S374FtCttTt22AY.300.000791
ORF1ab/nsp14A2-B374S374FtCttTt22AY.340.000194
ORF1ab/nsp14A2-B374S374FtCttTt22AY.360.000296
ORF1ab/nsp14A2-B374S374FtCttTt22AY.39.10.000079
ORF1ab/nsp14A2-B374S374FtCttTt22AY.400.001929
ORF1ab/nsp14A2-B374S374FtCttTt22AY.560.00321
ORF1ab/nsp14A2-B374S374FtCttTt22AY.670.000929
ORF1ab/nsp14A2-B374S374FtCttTt22AY.710.00095
ORF1ab/nsp14A2-B374S374FtCttTt22AY.90.000135
ORF1ab/nsp14A2-B374S374FtCttTt22AY.930.000546
ORF1ab/nsp14A2-B374S374FtCttTt22AY.99.10.003106
ORF1ab/nsp14A2-B374S374FtCttTt22B.1.1.1170.019417
ORF1ab/nsp14A2-B374S374FtCttTt22B.1.177.100.001756
ORF1ab/nsp14A2-B374S374FtCttTt22B.1.2400.000431
ORF1ab/nsp14A2-B374S374FtCttTt22B.1.5820.000981
ORF1ab/nsp14A2-B374S374FtCttTt22B.1.596.10.018692
ORF1ab/nsp14A2-B374S374FtCttTt11AD.20.000219
ORF1ab/nsp14A2-B374S374FtCttTt11AY.1000.000046
ORF1ab/nsp14A2-B374S374FtCttTt11AY.1110.000183
ORF1ab/nsp14A2-B374S374FtCttTt11AY.1130.000142
ORF1ab/nsp14A2-B374S374FtCttTt11AY.1180.000063
ORF1ab/nsp14A2-B374S374FtCttTt11AY.120.20.001285
ORF1ab/nsp14A2-B374S374FtCttTt11AY.200.000039
ORF1ab/nsp14A2-B374S374FtCttTt11AY.210.001898
ORF1ab/nsp14A2-B374S374FtCttTt11AY.29.10.000221
ORF1ab/nsp14A2-B374S374FtCttTt11AY.350.000233
ORF1ab/nsp14A2-B374S374FtCttTt11AY.4.20.000022
ORF1ab/nsp14A2-B374S374FtCttTt11AY.4.2.10.000149
ORF1ab/nsp14A2-B374S374FtCttTt11AY.46.20.000635
ORF1ab/nsp14A2-B374S374FtCttTt11AY.46.30.000934
ORF1ab/nsp14A2-B374S374FtCttTt11AY.530.000288
ORF1ab/nsp14A2-B374S374FtCttTt11AY.70.000196
ORF1ab/nsp14A2-B374S374FtCttTt11AY.720.001361
ORF1ab/nsp14A2-B374S374FtCttTt11AY.730.000665
ORF1ab/nsp14A2-B374S374FtCttTt11AY.740.000116
ORF1ab/nsp14A2-B374S374FtCttTt11AY.80.000606
ORF1ab/nsp14A2-B374S374FtCttTt11AY.9.10.000084
ORF1ab/nsp14A2-B374S374FtCttTt11AY.900.000684
ORF1ab/nsp14A2-B374S374FtCttTt11AY.950.000761
ORF1ab/nsp14A2-B374S374FtCttTt11AY.98.10.000048
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.1890.001513
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.2160.00089
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.2580.003257
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.3260.001761
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.3360.016667
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.4140.142857
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.4640.001473
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1.670.004566
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.177.210.000076
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.177.440.000519
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.1900.01
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.2050.02381
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.2140.003663
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.2210.000071
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.3280.03125
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.36.160.001425
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.36.260.002857
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.5250.000113
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.5640.000426
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.5960.000087
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.6210.000089
ORF1ab/nsp14A2-B374S374FtCttTt11B.1.621.10.000506
ORF1ab/nsp14A2-B374S374FtCttTt11B.400.000364
ORF1ab/nsp14A2-B374S374FtCttTt11C.370.000116
ORF1ab/nsp14A2-B374S374FtCttTt11D.20.000075
ORF1ab/nsp14A2-B374S374FtCttTt11P.1.150.000232
ORF1ab/nsp14A2-B374S374FtCttTt11P.1.170.000162
ORF1ab/nsp14A2-B374S374FtCttTt11P.20.000187