CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = S255S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B255S255SS6180SsynagCagT538153800.99981418802-18804
ORF1ab/nsp14A2-B255S255SS6180SsynAGcTCc538110.00018583918802-18804

Details of the mutation S255S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B255S255SagCagT53805381All0.001029
ORF1ab/nsp14A2-B255S255SAGcTCc15381All0
ORF1ab/nsp14A2-B255S255SagCagT24392439AY.250.01467
ORF1ab/nsp14A2-B255S255SagCagT519519AY.440.003159
ORF1ab/nsp14A2-B255S255SagCagT412412AY.260.011664
ORF1ab/nsp14A2-B255S255SagCagT401402B.1.1.70.000359
ORF1ab/nsp14A2-B255S255SAGcTCc1402B.1.1.70.000001
ORF1ab/nsp14A2-B255S255SagCagT175175AY.1030.001087
ORF1ab/nsp14A2-B255S255SagCagT174174B.1.617.20.000655
ORF1ab/nsp14A2-B255S255SagCagT170170P.10.002678
ORF1ab/nsp14A2-B255S255SagCagT157157B.1.20.001382
ORF1ab/nsp14A2-B255S255SagCagT114114AY.40.000177
ORF1ab/nsp14A2-B255S255SagCagT7575B.1.177.430.110783
ORF1ab/nsp14A2-B255S255SagCagT7272B.1.6370.005261
ORF1ab/nsp14A2-B255S255SagCagT5757AY.750.003193
ORF1ab/nsp14A2-B255S255SagCagT4545AY.430.000199
ORF1ab/nsp14A2-B255S255SagCagT4545R.10.00405
ORF1ab/nsp14A2-B255S255SagCagT3030AD.20.006569
ORF1ab/nsp14A2-B255S255SagCagT2626B.1.1770.000342
ORF1ab/nsp14A2-B255S255SagCagT2424B.10.00022
ORF1ab/nsp14A2-B255S255SagCagT2121AY.30.000209
ORF1ab/nsp14A2-B255S255SagCagT2020AY.4.20.000434
ORF1ab/nsp14A2-B255S255SagCagT1919AY.1020.000504
ORF1ab/nsp14A2-B255S255SagCagT1616B.1.2210.001137
ORF1ab/nsp14A2-B255S255SagCagT1414B.1.1.2140.000776
ORF1ab/nsp14A2-B255S255SagCagT1414B.1.2980.029598
ORF1ab/nsp14A2-B255S255SagCagT1313B.1.10.000236
ORF1ab/nsp14A2-B255S255SagCagT1111B.1.3110.00302
ORF1ab/nsp14A2-B255S255SagCagT1111B.1.6230.005901
ORF1ab/nsp14A2-B255S255SagCagT1010B.1.3510.000297
ORF1ab/nsp14A2-B255S255SagCagT99AY.1190.000318
ORF1ab/nsp14A2-B255S255SagCagT99AY.390.000222
ORF1ab/nsp14A2-B255S255SagCagT99AY.9.20.000331
ORF1ab/nsp14A2-B255S255SagCagT99B.1.5960.000784
ORF1ab/nsp14A2-B255S255SagCagT77AY.1000.000322
ORF1ab/nsp14A2-B255S255SagCagT77AY.290.00011
ORF1ab/nsp14A2-B255S255SagCagT77B.1.4290.000165
ORF1ab/nsp14A2-B255S255SagCagT66AY.1130.000854
ORF1ab/nsp14A2-B255S255SagCagT66AY.60.000247
ORF1ab/nsp14A2-B255S255SagCagT66AY.610.000629
ORF1ab/nsp14A2-B255S255SagCagT66AY.940.002656
ORF1ab/nsp14A2-B255S255SagCagT66B.1.5260.000141
ORF1ab/nsp14A2-B255S255SagCagT66B.1.5820.002944
ORF1ab/nsp14A2-B255S255SagCagT66B.1.5880.00546
ORF1ab/nsp14A2-B255S255SagCagT55AY.3.10.000426
ORF1ab/nsp14A2-B255S255SagCagT55AY.470.000156
ORF1ab/nsp14A2-B255S255SagCagT55AY.98.10.000242
ORF1ab/nsp14A2-B255S255SagCagT55B.1.360.00073
ORF1ab/nsp14A2-B255S255SagCagT55B.1.36.160.007123
ORF1ab/nsp14A2-B255S255SagCagT55B.1.416.10.007812
ORF1ab/nsp14A2-B255S255SagCagT55Q.10.000632
ORF1ab/nsp14A2-B255S255SagCagT44AY.740.000463
ORF1ab/nsp14A2-B255S255SagCagT44AY.980.000316
ORF1ab/nsp14A2-B255S255SagCagT44B.1.2340.000528
ORF1ab/nsp14A2-B255S255SagCagT44B.1.5950.001044
ORF1ab/nsp14A2-B255S255SagCagT44C.370.000464
ORF1ab/nsp14A2-B255S255SagCagT33AY.1140.000693
ORF1ab/nsp14A2-B255S255SagCagT33AY.1200.000112
ORF1ab/nsp14A2-B255S255SagCagT33AY.200.000117
ORF1ab/nsp14A2-B255S255SagCagT33AY.230.000209
ORF1ab/nsp14A2-B255S255SagCagT33AY.330.0002
ORF1ab/nsp14A2-B255S255SagCagT33AY.4.50.000322
ORF1ab/nsp14A2-B255S255SagCagT33AY.920.000862
ORF1ab/nsp14A2-B255S255SagCagT33B.1.1.2220.000612
ORF1ab/nsp14A2-B255S255SagCagT33B.1.1.3060.001315
ORF1ab/nsp14A2-B255S255SagCagT33B.1.258.170.000312
ORF1ab/nsp14A2-B255S255SagCagT33B.1.36.290.001552
ORF1ab/nsp14A2-B255S255SagCagT33B.1.3890.003006
ORF1ab/nsp14A2-B255S255SagCagT33B.1.617.10.000387
ORF1ab/nsp14A2-B255S255SagCagT22AY.100.00106
ORF1ab/nsp14A2-B255S255SagCagT22AY.1180.000125
ORF1ab/nsp14A2-B255S255SagCagT22AY.1210.000271
ORF1ab/nsp14A2-B255S255SagCagT22AY.460.000208
ORF1ab/nsp14A2-B255S255SagCagT22AY.630.000774
ORF1ab/nsp14A2-B255S255SagCagT22AY.690.000373
ORF1ab/nsp14A2-B255S255SagCagT22AY.850.000854
ORF1ab/nsp14A2-B255S255SagCagT22B0.000256
ORF1ab/nsp14A2-B255S255SagCagT22B.1.1.10.000653
ORF1ab/nsp14A2-B255S255SagCagT22B.1.1.1480.017544
ORF1ab/nsp14A2-B255S255SagCagT22B.1.1.3020.004149
ORF1ab/nsp14A2-B255S255SagCagT22B.1.1600.000062
ORF1ab/nsp14A2-B255S255SagCagT22B.1.160.100.016129
ORF1ab/nsp14A2-B255S255SagCagT22B.1.177.40.000422
ORF1ab/nsp14A2-B255S255SagCagT22B.1.2320.001075
ORF1ab/nsp14A2-B255S255SagCagT22B.1.2430.000139
ORF1ab/nsp14A2-B255S255SagCagT22B.1.351.30.001753
ORF1ab/nsp14A2-B255S255SagCagT22B.1.466.20.000782
ORF1ab/nsp14A2-B255S255SagCagT22B.1.4970.00063
ORF1ab/nsp14A2-B255S255SagCagT22B.1.5770.001375
ORF1ab/nsp14A2-B255S255SagCagT22D.20.00015
ORF1ab/nsp14A2-B255S255SagCagT11AH.30.003802
ORF1ab/nsp14A2-B255S255SagCagT11AY.10.000396
ORF1ab/nsp14A2-B255S255SagCagT11AY.1010.00049
ORF1ab/nsp14A2-B255S255SagCagT11AY.1160.000287
ORF1ab/nsp14A2-B255S255SagCagT11AY.1170.000085
ORF1ab/nsp14A2-B255S255SagCagT11AY.140.000088
ORF1ab/nsp14A2-B255S255SagCagT11AY.320.000532
ORF1ab/nsp14A2-B255S255SagCagT11AY.340.000097
ORF1ab/nsp14A2-B255S255SagCagT11AY.34.10.00051
ORF1ab/nsp14A2-B255S255SagCagT11AY.360.000148
ORF1ab/nsp14A2-B255S255SagCagT11AY.39.10.00004
ORF1ab/nsp14A2-B255S255SagCagT11AY.420.00004
ORF1ab/nsp14A2-B255S255SagCagT11AY.450.000122
ORF1ab/nsp14A2-B255S255SagCagT11AY.46.60.000072
ORF1ab/nsp14A2-B255S255SagCagT11AY.540.000095
ORF1ab/nsp14A2-B255S255SagCagT11AY.620.000436
ORF1ab/nsp14A2-B255S255SagCagT11AY.670.000464
ORF1ab/nsp14A2-B255S255SagCagT11AY.80.000606
ORF1ab/nsp14A2-B255S255SagCagT11AY.820.001357
ORF1ab/nsp14A2-B255S255SagCagT11AY.90.000068
ORF1ab/nsp14A2-B255S255SagCagT11AY.930.000273
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.2200.001859
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.280.000311
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.330.000421
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.3890.006061
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.5190.00004
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.630.000386
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1.700.000341
ORF1ab/nsp14A2-B255S255SagCagT11B.1.1390.000733
ORF1ab/nsp14A2-B255S255SagCagT11B.1.160.200.008929
ORF1ab/nsp14A2-B255S255SagCagT11B.1.177.100.000878
ORF1ab/nsp14A2-B255S255SagCagT11B.1.177.440.000519
ORF1ab/nsp14A2-B255S255SagCagT11B.1.2050.02381
ORF1ab/nsp14A2-B255S255SagCagT11B.1.2140.003663
ORF1ab/nsp14A2-B255S255SagCagT11B.1.214.20.0006
ORF1ab/nsp14A2-B255S255SagCagT11B.1.2580.000067
ORF1ab/nsp14A2-B255S255SagCagT11B.1.351.20.000303
ORF1ab/nsp14A2-B255S255SagCagT11B.1.3960.000706
ORF1ab/nsp14A2-B255S255SagCagT11B.1.4090.000781
ORF1ab/nsp14A2-B255S255SagCagT11B.1.4160.001269
ORF1ab/nsp14A2-B255S255SagCagT11B.1.4270.00005
ORF1ab/nsp14A2-B255S255SagCagT11B.1.438.10.000107
ORF1ab/nsp14A2-B255S255SagCagT11B.1.4990.00105
ORF1ab/nsp14A2-B255S255SagCagT11B.1.5090.000866
ORF1ab/nsp14A2-B255S255SagCagT11B.1.5240.001406
ORF1ab/nsp14A2-B255S255SagCagT11B.1.596.10.009346
ORF1ab/nsp14A2-B255S255SagCagT11B.1.6200.000946
ORF1ab/nsp14A2-B255S255SagCagT11B.1.6210.000089
ORF1ab/nsp14A2-B255S255SagCagT11B.1.6270.00202
ORF1ab/nsp14A2-B255S255SagCagT11B.1.6280.000352
ORF1ab/nsp14A2-B255S255SagCagT11B.230.002924
ORF1ab/nsp14A2-B255S255SagCagT11B.30.000831
ORF1ab/nsp14A2-B255S255SagCagT11B.400.000364
ORF1ab/nsp14A2-B255S255SagCagT11C.140.004329
ORF1ab/nsp14A2-B255S255SagCagT11C.360.000911
ORF1ab/nsp14A2-B255S255SagCagT11C.36.30.000567
ORF1ab/nsp14A2-B255S255SagCagT11P.1.120.000484
ORF1ab/nsp14A2-B255S255SagCagT11P.1.170.000162
ORF1ab/nsp14A2-B255S255SagCagT11P.30.001595
ORF1ab/nsp14A2-B255S255SagCagT11Q.30.000145
ORF1ab/nsp14A2-B255S255SagCagT11Q.80.000165