CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = R289H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B289R289HR6214HnonsyncGtcAt18947189430.99978918904-18906
ORF1ab/nsp14A2-B289R289HR6214HnonsyncGTcAC1894740.00021111518904-18906

Details of the mutation R289H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B289R289HcGtcAt1894318947All0.003623
ORF1ab/nsp14A2-B289R289HcGTcAC418947All0.000001
ORF1ab/nsp14A2-B289R289HcGtcAt84428442B.1.617.20.031788
ORF1ab/nsp14A2-B289R289HcGtcAt56805681AY.1020.150599
ORF1ab/nsp14A2-B289R289HcGTcAC15681AY.1020.000027
ORF1ab/nsp14A2-B289R289HcGtcAt855855AY.420.034397
ORF1ab/nsp14A2-B289R289HcGtcAt593593AY.390.014654
ORF1ab/nsp14A2-B289R289HcGtcAt559562AY.440.003402
ORF1ab/nsp14A2-B289R289HcGTcAC3562AY.440.000018
ORF1ab/nsp14A2-B289R289HcGtcAt315315AY.40.00049
ORF1ab/nsp14A2-B289R289HcGtcAt245245AY.9.20.008999
ORF1ab/nsp14A2-B289R289HcGtcAt237237AY.860.19668
ORF1ab/nsp14A2-B289R289HcGtcAt204204AY.430.000904
ORF1ab/nsp14A2-B289R289HcGtcAt129129AY.460.013426
ORF1ab/nsp14A2-B289R289HcGtcAt110110AY.450.013385
ORF1ab/nsp14A2-B289R289HcGtcAt8888AY.1180.005513
ORF1ab/nsp14A2-B289R289HcGtcAt8282AY.1040.162698
ORF1ab/nsp14A2-B289R289HcGtcAt8080B.1.1.70.000072
ORF1ab/nsp14A2-B289R289HcGtcAt7474AY.1170.006254
ORF1ab/nsp14A2-B289R289HcGtcAt6060AY.34.10.030597
ORF1ab/nsp14A2-B289R289HcGtcAt5454AY.1030.000335
ORF1ab/nsp14A2-B289R289HcGtcAt5454AY.5.30.018219
ORF1ab/nsp14A2-B289R289HcGtcAt5050AY.50.001032
ORF1ab/nsp14A2-B289R289HcGtcAt5050AY.980.00395
ORF1ab/nsp14A2-B289R289HcGtcAt4848AY.46.40.007896
ORF1ab/nsp14A2-B289R289HcGtcAt4848B.10.00044
ORF1ab/nsp14A2-B289R289HcGtcAt3838AY.75.10.006852
ORF1ab/nsp14A2-B289R289HcGtcAt3737AY.60.001522
ORF1ab/nsp14A2-B289R289HcGtcAt3636AY.1160.010324
ORF1ab/nsp14A2-B289R289HcGtcAt3535AY.1190.001236
ORF1ab/nsp14A2-B289R289HcGtcAt3535AY.250.000211
ORF1ab/nsp14A2-B289R289HcGtcAt2626AY.330.001736
ORF1ab/nsp14A2-B289R289HcGtcAt2525AY.230.001744
ORF1ab/nsp14A2-B289R289HcGtcAt2222AY.1000.001012
ORF1ab/nsp14A2-B289R289HcGtcAt2222AY.1110.004029
ORF1ab/nsp14A2-B289R289HcGtcAt2222AY.840.009624
ORF1ab/nsp14A2-B289R289HcGtcAt2121AY.46.20.013342
ORF1ab/nsp14A2-B289R289HcGtcAt2020AY.550.018349
ORF1ab/nsp14A2-B289R289HcGtcAt1818AY.1100.002028
ORF1ab/nsp14A2-B289R289HcGtcAt1818AY.410.005291
ORF1ab/nsp14A2-B289R289HcGtcAt1818AY.750.001008
ORF1ab/nsp14A2-B289R289HcGtcAt1717AY.770.019166
ORF1ab/nsp14A2-B289R289HcGtcAt1717AY.990.017838
ORF1ab/nsp14A2-B289R289HcGtcAt1717B.1.20.00015
ORF1ab/nsp14A2-B289R289HcGtcAt1515AY.1060.005023
ORF1ab/nsp14A2-B289R289HcGtcAt1515AY.1080.016538
ORF1ab/nsp14A2-B289R289HcGtcAt1515AY.1200.000558
ORF1ab/nsp14A2-B289R289HcGtcAt1515AY.640.008929
ORF1ab/nsp14A2-B289R289HcGtcAt1515B.1.2210.001065
ORF1ab/nsp14A2-B289R289HcGtcAt1414AY.1050.009003
ORF1ab/nsp14A2-B289R289HcGtcAt1414AY.30.000139
ORF1ab/nsp14A2-B289R289HcGtcAt1212AY.470.000373
ORF1ab/nsp14A2-B289R289HcGtcAt1212AY.920.003447
ORF1ab/nsp14A2-B289R289HcGtcAt1111AY.5.40.003044
ORF1ab/nsp14A2-B289R289HcGtcAt1111AY.500.008793
ORF1ab/nsp14A2-B289R289HcGtcAt1111AY.560.017657
ORF1ab/nsp14A2-B289R289HcGtcAt1111B.1.1.5190.000437
ORF1ab/nsp14A2-B289R289HcGtcAt1010AY.1140.002311
ORF1ab/nsp14A2-B289R289HcGtcAt1010AY.780.015408
ORF1ab/nsp14A2-B289R289HcGtcAt1010B.1.1770.000132
ORF1ab/nsp14A2-B289R289HcGtcAt99AY.46.10.00924
ORF1ab/nsp14A2-B289R289HcGtcAt99AY.800.010158
ORF1ab/nsp14A2-B289R289HcGtcAt88AY.900.005476
ORF1ab/nsp14A2-B289R289HcGtcAt77AY.98.10.000339
ORF1ab/nsp14A2-B289R289HcGtcAt66AY.1130.000854
ORF1ab/nsp14A2-B289R289HcGtcAt66AY.590.003178
ORF1ab/nsp14A2-B289R289HcGtcAt66AY.740.000694
ORF1ab/nsp14A2-B289R289HcGtcAt55AY.120.10.001605
ORF1ab/nsp14A2-B289R289HcGtcAt55AY.140.00044
ORF1ab/nsp14A2-B289R289HcGtcAt55AY.200.000194
ORF1ab/nsp14A2-B289R289HcGtcAt55AY.320.002662
ORF1ab/nsp14A2-B289R289HcGtcAt55AY.870.004163
ORF1ab/nsp14A2-B289R289HcGtcAt55AY.890.02451
ORF1ab/nsp14A2-B289R289HcGtcAt55B.1.1.4800.125
ORF1ab/nsp14A2-B289R289HcGtcAt55B.1.177.650.003327
ORF1ab/nsp14A2-B289R289HcGtcAt55B.1.4990.005252
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.110.005355
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.170.032787
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.340.000388
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.360.000593
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.580.00363
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.610.000419
ORF1ab/nsp14A2-B289R289HcGtcAt44AY.880.003537
ORF1ab/nsp14A2-B289R289HcGtcAt44B.1.5260.000094
ORF1ab/nsp14A2-B289R289HcGtcAt44P.10.000063
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.1210.000406
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.190.003421
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.210.005693
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.290.000047
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.4.20.000065
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.400.002893
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.710.001425
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.820.004071
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.850.001282
ORF1ab/nsp14A2-B289R289HcGtcAt33AY.960.006224
ORF1ab/nsp14A2-B289R289HcGtcAt33B.1.1600.000094
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.10.000791
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.1090.001479
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.39.10.000079
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.4.2.10.000298
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.46.60.000144
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.480.00093
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.520.001629
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.680.000547
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.790.002421
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.930.000546
ORF1ab/nsp14A2-B289R289HcGtcAt22AY.950.001522
ORF1ab/nsp14A2-B289R289HcGtcAt22B0.000256
ORF1ab/nsp14A2-B289R289HcGtcAt22B.1.10.000036
ORF1ab/nsp14A2-B289R289HcGtcAt22B.1.1.10.000653
ORF1ab/nsp14A2-B289R289HcGtcAt22B.1.3510.000059
ORF1ab/nsp14A2-B289R289HcGtcAt22B.1.6210.000177
ORF1ab/nsp14A2-B289R289HcGtcAt22B.1.6270.00404
ORF1ab/nsp14A2-B289R289HcGtcAt11A.290.005319
ORF1ab/nsp14A2-B289R289HcGtcAt11AD.20.000219
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.100.00053
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.1010.00049
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.1070.000466
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.130.000161
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.160.00038
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.260.000028
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.270.000065
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.370.000316
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.380.000499
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.4.30.000842
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.4.40.000409
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.490.003195
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.530.000288
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.540.000095
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.570.000656
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.620.000436
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.650.000533
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.660.00107
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.670.000464
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.690.000187
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.700.000209
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.90.000068
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.9.10.000084
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.910.00073
ORF1ab/nsp14A2-B289R289HcGtcAt11AY.99.10.001553
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.1.2650.003155
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.1.280.000311
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.1.3060.000438
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.1.3160.000925
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.1.3540.004386
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.1.3970.002252
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.3110.000275
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.3690.000285
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.3960.000706
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.5250.000113
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.6090.000479
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.617.10.000129
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.6190.000871
ORF1ab/nsp14A2-B289R289HcGtcAt11B.1.6230.000536
ORF1ab/nsp14A2-B289R289HcGtcAt11P.1.170.000162