CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P46T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B46P46TP5971TnonsynCctAct28270.96428618175-18177
ORF1ab/nsp14A2-B46P46TP5971TnonsynCcTAcG2810.035714318175-18177

Details of the mutation P46T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B46P46TCctAct2728All0.000005
ORF1ab/nsp14A2-B46P46TCcTAcG128All0
ORF1ab/nsp14A2-B46P46TCctAct66B.1.1.70.000005
ORF1ab/nsp14A2-B46P46TCctAct44B.10.000037
ORF1ab/nsp14A2-B46P46TCctAct220.111111
ORF1ab/nsp14A2-B46P46TCctAct22AY.40.000003
ORF1ab/nsp14A2-B46P46TCctAct22AY.60.000082
ORF1ab/nsp14A2-B46P46TCctAct22B.1.4290.000047
ORF1ab/nsp14A2-B46P46TCctAct11AY.4.10.000737
ORF1ab/nsp14A2-B46P46TCctAct11AY.420.00004
ORF1ab/nsp14A2-B46P46TCctAct11AY.430.000004
ORF1ab/nsp14A2-B46P46TCctAct11AY.440.000006
ORF1ab/nsp14A2-B46P46TCctAct11AY.470.000031
ORF1ab/nsp14A2-B46P46TCctAct11AY.920.000287
ORF1ab/nsp14A2-B46P46TCctAct11B.1.177.860.000183
ORF1ab/nsp14A2-B46P46TCcTAcG11B.1.20.000009
ORF1ab/nsp14A2-B46P46TCctAct11B.1.3690.000285
ORF1ab/nsp14A2-B46P46TCctAct11B.1.4090.000781