CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P46S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B46P46SP5971SnonsynCctTct31263126118175-18177

Details of the mutation P46S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B46P46SCctTct31263126All0.000598
ORF1ab/nsp14A2-B46P46SCctTct17881788B.1.1.70.001601
ORF1ab/nsp14A2-B46P46SCctTct117117AY.40.000182
ORF1ab/nsp14A2-B46P46SCctTct7272AY.30.000716
ORF1ab/nsp14A2-B46P46SCctTct7272P.1.170.011647
ORF1ab/nsp14A2-B46P46SCctTct7070B.10.000641
ORF1ab/nsp14A2-B46P46SCctTct6464P.10.001008
ORF1ab/nsp14A2-B46P46SCctTct5454B.1.617.20.000203
ORF1ab/nsp14A2-B46P46SCctTct5252A.2.50.025948
ORF1ab/nsp14A2-B46P46SCctTct5050AY.250.000301
ORF1ab/nsp14A2-B46P46SCctTct4545C.350.03483
ORF1ab/nsp14A2-B46P46SCctTct4242B.1.20.00037
ORF1ab/nsp14A2-B46P46SCctTct3434B.1.177.210.0026
ORF1ab/nsp14A2-B46P46SCctTct3333B.1.10.000599
ORF1ab/nsp14A2-B46P46SCctTct3232AY.430.000142
ORF1ab/nsp14A2-B46P46SCctTct2525AY.440.000152
ORF1ab/nsp14A2-B46P46SCctTct2525B.1.4290.000588
ORF1ab/nsp14A2-B46P46SCctTct2424AY.46.60.001733
ORF1ab/nsp14A2-B46P46SCctTct2121B.1.1770.000277
ORF1ab/nsp14A2-B46P46SCctTct2121B.1.5260.000494
ORF1ab/nsp14A2-B46P46SCctTct2020AY.50.000413
ORF1ab/nsp14A2-B46P46SCctTct1919AY.1030.000118
ORF1ab/nsp14A2-B46P46SCctTct1818B.1.3190.054878
ORF1ab/nsp14A2-B46P46SCctTct1717AY.260.000481
ORF1ab/nsp14A2-B46P46SCctTct1717B.1.2210.001208
ORF1ab/nsp14A2-B46P46SCctTct1313Q.10.001642
ORF1ab/nsp14A2-B46P46SCctTct1212AY.290.000189
ORF1ab/nsp14A2-B46P46SCctTct1111P.1.140.000526
ORF1ab/nsp14A2-B46P46SCctTct1111P.1.150.002556
ORF1ab/nsp14A2-B46P46SCctTct1010AY.1020.000265
ORF1ab/nsp14A2-B46P46SCctTct1010AY.730.006653
ORF1ab/nsp14A2-B46P46SCctTct1010B.1.1.3180.003018
ORF1ab/nsp14A2-B46P46SCctTct99AY.450.001095
ORF1ab/nsp14A2-B46P46SCctTct99B.1.6210.000797
ORF1ab/nsp14A2-B46P46SCctTct88B.1.1110.009401
ORF1ab/nsp14A2-B46P46SCctTct88B.1.177.810.001515
ORF1ab/nsp14A2-B46P46SCctTct88B.1.3510.000238
ORF1ab/nsp14A2-B46P46SCctTct88B.1.3610.010309
ORF1ab/nsp14A2-B46P46SCctTct77AY.330.000467
ORF1ab/nsp14A2-B46P46SCctTct77AY.610.000733
ORF1ab/nsp14A2-B46P46SCctTct77AY.980.000553
ORF1ab/nsp14A2-B46P46SCctTct77B.1.1.2140.000388
ORF1ab/nsp14A2-B46P46SCctTct66AY.1200.000223
ORF1ab/nsp14A2-B46P46SCctTct66AY.230.000418
ORF1ab/nsp14A2-B46P46SCctTct66AY.390.000148
ORF1ab/nsp14A2-B46P46SCctTct66AY.470.000187
ORF1ab/nsp14A2-B46P46SCctTct66B.1.2430.000418
ORF1ab/nsp14A2-B46P46SCctTct66R.10.00054
ORF1ab/nsp14A2-B46P46SCctTct55AY.1100.000563
ORF1ab/nsp14A2-B46P46SCctTct55AY.116.10.001557
ORF1ab/nsp14A2-B46P46SCctTct55AY.1190.000177
ORF1ab/nsp14A2-B46P46SCctTct55C.360.004554
ORF1ab/nsp14A2-B46P46SCctTct55P.20.000933
ORF1ab/nsp14A2-B46P46SCctTct44AY.1170.000338
ORF1ab/nsp14A2-B46P46SCctTct44B.1.1.4480.00813
ORF1ab/nsp14A2-B46P46SCctTct44B.1.1.5190.000159
ORF1ab/nsp14A2-B46P46SCctTct44B.1.1600.000125
ORF1ab/nsp14A2-B46P46SCctTct44B.1.177.580.005326
ORF1ab/nsp14A2-B46P46SCctTct44B.1.3620.006163
ORF1ab/nsp14A2-B46P46SCctTct44B.1.5770.002749
ORF1ab/nsp14A2-B46P46SCctTct44B.1.6370.000292
ORF1ab/nsp14A2-B46P46SCctTct44Q.30.00058
ORF1ab/nsp14A2-B46P46SCctTct33AY.1130.000427
ORF1ab/nsp14A2-B46P46SCctTct33AY.200.000117
ORF1ab/nsp14A2-B46P46SCctTct33AY.4.20.000065
ORF1ab/nsp14A2-B46P46SCctTct33B.1.360.000438
ORF1ab/nsp14A2-B46P46SCctTct33B.1.3980.008929
ORF1ab/nsp14A2-B46P46SCctTct33B.1.5960.000261
ORF1ab/nsp14A2-B46P46SCctTct33P.1.40.00293
ORF1ab/nsp14A2-B46P46SCctTct22AY.1000.000092
ORF1ab/nsp14A2-B46P46SCctTct22AY.3.10.000171
ORF1ab/nsp14A2-B46P46SCctTct22AY.4.50.000215
ORF1ab/nsp14A2-B46P46SCctTct22AY.460.000208
ORF1ab/nsp14A2-B46P46SCctTct22AY.60.000082
ORF1ab/nsp14A2-B46P46SCctTct22AY.90.000135
ORF1ab/nsp14A2-B46P46SCctTct22AY.9.20.000073
ORF1ab/nsp14A2-B46P46SCctTct22AY.98.10.000097
ORF1ab/nsp14A2-B46P46SCctTct22B0.000256
ORF1ab/nsp14A2-B46P46SCctTct22B.1.1.10.000653
ORF1ab/nsp14A2-B46P46SCctTct22B.1.1.2220.000408
ORF1ab/nsp14A2-B46P46SCctTct22B.1.1.280.000622
ORF1ab/nsp14A2-B46P46SCctTct22B.1.1280.001271
ORF1ab/nsp14A2-B46P46SCctTct22B.1.1310.017544
ORF1ab/nsp14A2-B46P46SCctTct22B.1.177.570.000562
ORF1ab/nsp14A2-B46P46SCctTct22B.1.177.60.001953
ORF1ab/nsp14A2-B46P46SCctTct22B.1.177.600.000437
ORF1ab/nsp14A2-B46P46SCctTct22B.1.36.220.002415
ORF1ab/nsp14A2-B46P46SCctTct22B.1.4220.001625
ORF1ab/nsp14A2-B46P46SCctTct22B.1.4280.002041
ORF1ab/nsp14A2-B46P46SCctTct22B.1.4990.002101
ORF1ab/nsp14A2-B46P46SCctTct22B.1.5050.008772
ORF1ab/nsp14A2-B46P46SCctTct22B.1.617.10.000258
ORF1ab/nsp14A2-B46P46SCctTct22D.20.00015
ORF1ab/nsp14A2-B46P46SCctTct22P.1.120.000968
ORF1ab/nsp14A2-B46P46SCctTct22Q.40.00091
ORF1ab/nsp14A2-B46P46SCctTct11A.10.000282
ORF1ab/nsp14A2-B46P46SCctTct11AE.80.000489
ORF1ab/nsp14A2-B46P46SCctTct11AY.10.000396
ORF1ab/nsp14A2-B46P46SCctTct11AY.1060.000335
ORF1ab/nsp14A2-B46P46SCctTct11AY.1110.000183
ORF1ab/nsp14A2-B46P46SCctTct11AY.1160.000287
ORF1ab/nsp14A2-B46P46SCctTct11AY.1180.000063
ORF1ab/nsp14A2-B46P46SCctTct11AY.20.000356
ORF1ab/nsp14A2-B46P46SCctTct11AY.270.000065
ORF1ab/nsp14A2-B46P46SCctTct11AY.280.00189
ORF1ab/nsp14A2-B46P46SCctTct11AY.300.000396
ORF1ab/nsp14A2-B46P46SCctTct11AY.360.000148
ORF1ab/nsp14A2-B46P46SCctTct11AY.420.00004
ORF1ab/nsp14A2-B46P46SCctTct11AY.46.30.000934
ORF1ab/nsp14A2-B46P46SCctTct11AY.46.40.000165
ORF1ab/nsp14A2-B46P46SCctTct11AY.46.50.000198
ORF1ab/nsp14A2-B46P46SCctTct11AY.5.30.000337
ORF1ab/nsp14A2-B46P46SCctTct11AY.570.000656
ORF1ab/nsp14A2-B46P46SCctTct11AY.670.000464
ORF1ab/nsp14A2-B46P46SCctTct11AY.750.000056
ORF1ab/nsp14A2-B46P46SCctTct11AY.770.001127
ORF1ab/nsp14A2-B46P46SCctTct11AY.790.001211
ORF1ab/nsp14A2-B46P46SCctTct11AY.810.001992
ORF1ab/nsp14A2-B46P46SCctTct11AY.880.000884
ORF1ab/nsp14A2-B46P46SCctTct11AY.940.000443
ORF1ab/nsp14A2-B46P46SCctTct11AY.99.20.000092
ORF1ab/nsp14A2-B46P46SCctTct11AZ.10.000867
ORF1ab/nsp14A2-B46P46SCctTct11B.1.1.2160.00089
ORF1ab/nsp14A2-B46P46SCctTct11B.1.1.2650.003155
ORF1ab/nsp14A2-B46P46SCctTct11B.1.1.2770.000759
ORF1ab/nsp14A2-B46P46SCctTct11B.1.1.2840.000107
ORF1ab/nsp14A2-B46P46SCctTct11B.1.1.3290.003846
ORF1ab/nsp14A2-B46P46SCctTct11B.1.110.30.000718
ORF1ab/nsp14A2-B46P46SCctTct11B.1.1460.004237
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.30.007634
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.440.000519
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.540.000606
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.560.000668
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.730.000566
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.750.001041
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.80.000752
ORF1ab/nsp14A2-B46P46SCctTct11B.1.177.830.001481
ORF1ab/nsp14A2-B46P46SCctTct11B.1.214.30.007143
ORF1ab/nsp14A2-B46P46SCctTct11B.1.230.006061
ORF1ab/nsp14A2-B46P46SCctTct11B.1.2340.000132
ORF1ab/nsp14A2-B46P46SCctTct11B.1.2580.000067
ORF1ab/nsp14A2-B46P46SCctTct11B.1.3110.000275
ORF1ab/nsp14A2-B46P46SCctTct11B.1.3210.034483
ORF1ab/nsp14A2-B46P46SCctTct11B.1.36.290.000517
ORF1ab/nsp14A2-B46P46SCctTct11B.1.36.80.001
ORF1ab/nsp14A2-B46P46SCctTct11B.1.3600.012658
ORF1ab/nsp14A2-B46P46SCctTct11B.1.4320.011236
ORF1ab/nsp14A2-B46P46SCctTct11B.1.438.10.000107
ORF1ab/nsp14A2-B46P46SCctTct11B.1.466.20.000391
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5170.000427
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5250.000113
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5300.007143
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5510.00129
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5600.00463
ORF1ab/nsp14A2-B46P46SCctTct11B.1.564.10.001577
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5890.007576
ORF1ab/nsp14A2-B46P46SCctTct11B.1.5950.000261
ORF1ab/nsp14A2-B46P46SCctTct11B.1.619.10.000641
ORF1ab/nsp14A2-B46P46SCctTct11B.1.6200.000946
ORF1ab/nsp14A2-B46P46SCctTct11B.400.000364
ORF1ab/nsp14A2-B46P46SCctTct11B.580.010204
ORF1ab/nsp14A2-B46P46SCctTct11C.36.30.000567
ORF1ab/nsp14A2-B46P46SCctTct11Q.70.001111
ORF1ab/nsp14A2-B46P46SCctTct11Q.80.000165