CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P46L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B46P46LP5971LnonsyncCtcTt60650606480.99996718175-18177
ORF1ab/nsp14A2-B46P46LP5971LnonsyncCTcTC6065020.000032976118175-18177

Details of the mutation P46L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B46P46LcCtcTt6064860650All0.0116
ORF1ab/nsp14A2-B46P46LcCTcTC260650All0
ORF1ab/nsp14A2-B46P46LcCtcTt1124011240AY.140.989262
ORF1ab/nsp14A2-B46P46LcCtcTt98959895AY.540.943459
ORF1ab/nsp14A2-B46P46LcCtcTt96059605B.1.258.170.998648
ORF1ab/nsp14A2-B46P46LcCtcTt78187818B.1.617.20.029438
ORF1ab/nsp14A2-B46P46LcCtcTt55165516AY.130.887959
ORF1ab/nsp14A2-B46P46LcCtcTt32193219AY.530.925532
ORF1ab/nsp14A2-B46P46LcCtcTt24092409AY.160.914579
ORF1ab/nsp14A2-B46P46LcCtcTt16331633AY.80.989697
ORF1ab/nsp14A2-B46P46LcCtcTt11781178AY.500.941647
ORF1ab/nsp14A2-B46P46LcCtcTt10671067AY.510.97
ORF1ab/nsp14A2-B46P46LcCtcTt913913AY.16.10.429041
ORF1ab/nsp14A2-B46P46LcCtcTt763763AY.520.621336
ORF1ab/nsp14A2-B46P46LcCtcTt481481B.10.004406
ORF1ab/nsp14A2-B46P46LcCtcTt447447AY.150.993333
ORF1ab/nsp14A2-B46P46LcCtcTt383383AY.430.001697
ORF1ab/nsp14A2-B46P46LcCtcTt350350AY.190.399088
ORF1ab/nsp14A2-B46P46LcCtcTt340340AY.40.000529
ORF1ab/nsp14A2-B46P46LcCtcTt240240AY.490.766773
ORF1ab/nsp14A2-B46P46LcCtcTt192192B.1.1.70.000172
ORF1ab/nsp14A2-B46P46LcCtcTt179179AY.480.083256
ORF1ab/nsp14A2-B46P46LcCtcTt162162K.31
ORF1ab/nsp14A2-B46P46LcCtcTt129129AY.380.064403
ORF1ab/nsp14A2-B46P46LcCtcTt110111AY.440.00067
ORF1ab/nsp14A2-B46P46LcCTcTC1111AY.440.000006
ORF1ab/nsp14A2-B46P46LcCtcTt103103AY.620.04488
ORF1ab/nsp14A2-B46P46LcCtcTt102102AY.750.005714
ORF1ab/nsp14A2-B46P46LcCtcTt101101AY.550.092661
ORF1ab/nsp14A2-B46P46LcCtcTt9898AY.180.989899
ORF1ab/nsp14A2-B46P46LcCtcTt9090AY.170.737705
ORF1ab/nsp14A2-B46P46LcCtcTt7878AY.650.041578
ORF1ab/nsp14A2-B46P46LcCtcTt7373AY.75.10.013163
ORF1ab/nsp14A2-B46P46LcCtcTt6666AY.980.005214
ORF1ab/nsp14A2-B46P46LcCtcTt6666B.1.2580.004392
ORF1ab/nsp14A2-B46P46LcCtcTt6262AY.680.016972
ORF1ab/nsp14A2-B46P46LcCtcTt6161AY.260.001727
ORF1ab/nsp14A2-B46P46LcCtcTt5959AY.1200.002194
ORF1ab/nsp14A2-B46P46LcCtcTt5252AY.400.050145
ORF1ab/nsp14A2-B46P46LcCtcTt4646AY.100.024377
ORF1ab/nsp14A2-B46P46LcCtcTt4545AY.250.000271
ORF1ab/nsp14A2-B46P46LcCtcTt4545B.1.10.000816
ORF1ab/nsp14A2-B46P46LcCtcTt4444AY.1050.028296
ORF1ab/nsp14A2-B46P46LcCtcTt4444AY.9.20.001616
ORF1ab/nsp14A2-B46P46LcCtcTt4242AY.640.025
ORF1ab/nsp14A2-B46P46LcCtcTt4141AY.390.001013
ORF1ab/nsp14A2-B46P46LcCtcTt3737B0.004729
ORF1ab/nsp14A2-B46P46LcCtcTt3333AY.460.003435
ORF1ab/nsp14A2-B46P46LcCtcTt3333AY.470.001026
ORF1ab/nsp14A2-B46P46LcCtcTt3232B.1.6090.01534
ORF1ab/nsp14A2-B46P46LcCtcTt2828AY.350.006525
ORF1ab/nsp14A2-B46P46LcCtcTt2727AY.700.00563
ORF1ab/nsp14A2-B46P46LcCtcTt2525AY.1030.000155
ORF1ab/nsp14A2-B46P46LcCtcTt2525AY.610.002619
ORF1ab/nsp14A2-B46P46LcCtcTt2525B.1.1770.000329
ORF1ab/nsp14A2-B46P46LcCtcTt2323AY.1170.001944
ORF1ab/nsp14A2-B46P46LcCtcTt2222B.1.20.000194
ORF1ab/nsp14A2-B46P46LcCtcTt2121AY.330.001402
ORF1ab/nsp14A2-B46P46LcCtcTt2121AY.730.013972
ORF1ab/nsp14A2-B46P46LcCtcTt2121Q.30.003046
ORF1ab/nsp14A2-B46P46LcCtcTt1919AY.5.40.005257
ORF1ab/nsp14A2-B46P46LcCtcTt1919AY.670.008821
ORF1ab/nsp14A2-B46P46LcCtcTt1919B.1.258.240.204301
ORF1ab/nsp14A2-B46P46LcCtcTt1818AY.340.001745
ORF1ab/nsp14A2-B46P46LcCtcTt1818B.1.5260.000423
ORF1ab/nsp14A2-B46P46LcCtcTt1717AY.370.005373
ORF1ab/nsp14A2-B46P46LcCtcTt1717AY.9.10.001423
ORF1ab/nsp14A2-B46P46LcCtcTt1616AY.560.025682
ORF1ab/nsp14A2-B46P46LcCtcTt1515AY.230.001046
ORF1ab/nsp14A2-B46P46LcCtcTt1515AY.30.000149
ORF1ab/nsp14A2-B46P46LcCtcTt1515AY.780.023112
ORF1ab/nsp14A2-B46P46LcCtcTt1414AY.860.011618
ORF1ab/nsp14A2-B46P46LcCtcTt1313AY.200.000505
ORF1ab/nsp14A2-B46P46LcCtcTt1212AY.420.000483
ORF1ab/nsp14A2-B46P46LcCtcTt1212P.10.000189
ORF1ab/nsp14A2-B46P46LcCtcTt1111AY.290.000174
ORF1ab/nsp14A2-B46P46LcCtcTt1111AY.590.005826
ORF1ab/nsp14A2-B46P46LcCtcTt1111AY.7.10.00124
ORF1ab/nsp14A2-B46P46LcCtcTt1111AY.850.004699
ORF1ab/nsp14A2-B46P46LcCtcTt1010AY.1020.000265
ORF1ab/nsp14A2-B46P46LcCtcTt1010B.1.1.700.003411
ORF1ab/nsp14A2-B46P46LcCtcTt1010B.1.2430.000696
ORF1ab/nsp14A2-B46P46LcCtcTt1010B.1.258.40.034483
ORF1ab/nsp14A2-B46P46LcCtcTt99AY.1190.000318
ORF1ab/nsp14A2-B46P46LcCtcTt99AY.580.008167
ORF1ab/nsp14A2-B46P46LcCtcTt88AY.1100.000902
ORF1ab/nsp14A2-B46P46LcCtcTt88AY.240.003448
ORF1ab/nsp14A2-B46P46LcCtcTt88AY.4.20.000174
ORF1ab/nsp14A2-B46P46LcCtcTt88B.1.1600.00025
ORF1ab/nsp14A2-B46P46LcCtcTt88B.1.4290.000188
ORF1ab/nsp14A2-B46P46LcCtcTt77AY.110.009371
ORF1ab/nsp14A2-B46P46LcCtcTt77AY.770.007892
ORF1ab/nsp14A2-B46P46LcCtcTt77B.1.1.280.002179
ORF1ab/nsp14A2-B46P46LcCtcTt77B.4.10.132075
ORF1ab/nsp14A2-B46P46LcCtcTt66AY.1060.002009
ORF1ab/nsp14A2-B46P46LcCtcTt66AY.1140.001387
ORF1ab/nsp14A2-B46P46LcCtcTt66AY.450.00073
ORF1ab/nsp14A2-B46P46LcCtcTt66AY.50.000124
ORF1ab/nsp14A2-B46P46LcCtcTt66AY.840.002625
ORF1ab/nsp14A2-B46P46LcCtcTt66AY.90.000406
ORF1ab/nsp14A2-B46P46LcCtcTt66B.1.3510.000178
ORF1ab/nsp14A2-B46P46LcCtcTt66B.1.3750.004918
ORF1ab/nsp14A2-B46P46LcCtcTt55AY.280.009452
ORF1ab/nsp14A2-B46P46LcCtcTt55AY.300.001979
ORF1ab/nsp14A2-B46P46LcCtcTt55AY.46.20.003177
ORF1ab/nsp14A2-B46P46LcCtcTt55AY.710.002375
ORF1ab/nsp14A2-B46P46LcCtcTt55AY.810.00996
ORF1ab/nsp14A2-B46P46LcCtcTt55B.1.2140.018315
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.1210.000541
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.4.2.10.000596
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.60.000165
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.660.004278
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.7.20.002237
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.870.003331
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.930.001092
ORF1ab/nsp14A2-B46P46LcCtcTt44AY.98.10.000194
ORF1ab/nsp14A2-B46P46LcCtcTt44B.1.1.2140.000222
ORF1ab/nsp14A2-B46P46LcCtcTt44B.1.1.3160.0037
ORF1ab/nsp14A2-B46P46LcCtcTt44B.1.1.4320.005063
ORF1ab/nsp14A2-B46P46LcCtcTt44B.1.1.5190.000159
ORF1ab/nsp14A2-B46P46LcCtcTt44B.1.390.015625
ORF1ab/nsp14A2-B46P46LcCtcTt44B.1.617.10.000516
ORF1ab/nsp14A2-B46P46LcCtcTt44P.1.140.000191
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.1160.00086
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.46.40.000494
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.690.00056
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.720.004082
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.740.000347
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.920.000862
ORF1ab/nsp14A2-B46P46LcCtcTt33AY.950.002283
ORF1ab/nsp14A2-B46P46LcCtcTt33B.1.2210.000213
ORF1ab/nsp14A2-B46P46LcCtcTt33B.1.5880.00273
ORF1ab/nsp14A2-B46P46LcCtcTt33P.1.120.001452
ORF1ab/nsp14A2-B46P46LcCtcTt33P.1.150.000697
ORF1ab/nsp14A2-B46P46LcCtcTt33Q.80.000495
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.10.000791
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.1010.000981
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.220.004184
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.3.10.000171
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.39.10.000079
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.410.000588
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.46.60.000144
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.900.001369
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.99.10.003106
ORF1ab/nsp14A2-B46P46LcCtcTt22AY.99.20.000184
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.1.250.001137
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.1.2910.001485
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.1.3080.023529
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.1.3470.036364
ORF1ab/nsp14A2-B46P46LcCtcTt12B.1.1.390.00051
ORF1ab/nsp14A2-B46P46LcCTcTC12B.1.1.390.00051
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.1.4340.000697
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.177.730.001133
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.2340.000264
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.3620.003082
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.5960.000174
ORF1ab/nsp14A2-B46P46LcCtcTt22B.1.6340.006849
ORF1ab/nsp14A2-B46P46LcCtcTt22D.20.00015
ORF1ab/nsp14A2-B46P46LcCtcTt11A0.000387
ORF1ab/nsp14A2-B46P46LcCtcTt11A.2.50.000499
ORF1ab/nsp14A2-B46P46LcCtcTt11A.230.010526
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.1000.000046
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.1070.000466
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.1080.001103
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.1130.000142
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.1180.000063
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.120.000316
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.120.20.001285
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.210.001898
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.320.000532
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.360.000148
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.4.50.000107
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.46.50.000198
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.5.30.000337
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.70.000196
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.760.004831
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.800.001129
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.820.001357
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.880.000884
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.910.00073
ORF1ab/nsp14A2-B46P46LcCtcTt11AY.970.001701
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.1570.000913
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.3120.001912
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.3260.001761
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.3480.000796
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.3970.002252
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.460.004367
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1.470.005348
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.110.30.000718
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1280.000635
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.1570.002985
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.177.310.011494
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.177.320.00135
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.177.600.000218
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.177.810.000189
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.177.870.000728
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.2120.016667
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.2220.001692
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.2320.000537
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.2600.003344
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.3050.002151
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.360.000146
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.4090.000781
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.4160.001269
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.416.10.001563
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.4360.001029
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5070.011236
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5300.007143
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5610.000397
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5640.000426
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5760.000907
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5970.00463
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.5990.00365
ORF1ab/nsp14A2-B46P46LcCtcTt11B.1.6370.000073
ORF1ab/nsp14A2-B46P46LcCtcTt11B.380.02381
ORF1ab/nsp14A2-B46P46LcCtcTt11B.60.00091
ORF1ab/nsp14A2-B46P46LcCtcTt11C.160.00106
ORF1ab/nsp14A2-B46P46LcCtcTt11C.180.002591
ORF1ab/nsp14A2-B46P46LcCtcTt11C.370.000116
ORF1ab/nsp14A2-B46P46LcCtcTt11R.20.014493