CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 46 | P46L | P5971L | nonsyn | cCt | cTt | 60650 | 60648 | 0.999967 | 18175-18177 |
ORF1ab/nsp14A2-B | 46 | P46L | P5971L | nonsyn | cCT | cTC | 60650 | 2 | 0.0000329761 | 18175-18177 |
Details of the mutation P46L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 60648 | 60650 | All | 0.0116 |
ORF1ab/nsp14A2-B | 46 | P46L | cCT | cTC | 2 | 60650 | All | 0 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 11240 | 11240 | AY.14 | 0.989262 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 9895 | 9895 | AY.54 | 0.943459 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 9605 | 9605 | B.1.258.17 | 0.998648 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 7818 | 7818 | B.1.617.2 | 0.029438 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5516 | 5516 | AY.13 | 0.887959 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3219 | 3219 | AY.53 | 0.925532 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2409 | 2409 | AY.16 | 0.914579 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1633 | 1633 | AY.8 | 0.989697 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1178 | 1178 | AY.50 | 0.941647 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1067 | 1067 | AY.51 | 0.97 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 913 | 913 | AY.16.1 | 0.429041 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 763 | 763 | AY.52 | 0.621336 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 481 | 481 | B.1 | 0.004406 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 447 | 447 | AY.15 | 0.993333 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 383 | 383 | AY.43 | 0.001697 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 350 | 350 | AY.19 | 0.399088 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 340 | 340 | AY.4 | 0.000529 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 240 | 240 | AY.49 | 0.766773 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 192 | 192 | B.1.1.7 | 0.000172 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 179 | 179 | AY.48 | 0.083256 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 162 | 162 | K.3 | 1 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 129 | 129 | AY.38 | 0.064403 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 110 | 111 | AY.44 | 0.00067 |
ORF1ab/nsp14A2-B | 46 | P46L | cCT | cTC | 1 | 111 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 103 | 103 | AY.62 | 0.04488 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 102 | 102 | AY.75 | 0.005714 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 101 | 101 | AY.55 | 0.092661 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 98 | 98 | AY.18 | 0.989899 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 90 | 90 | AY.17 | 0.737705 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 78 | 78 | AY.65 | 0.041578 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 73 | 73 | AY.75.1 | 0.013163 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 66 | 66 | AY.98 | 0.005214 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 66 | 66 | B.1.258 | 0.004392 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 62 | 62 | AY.68 | 0.016972 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 61 | 61 | AY.26 | 0.001727 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 59 | 59 | AY.120 | 0.002194 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 52 | 52 | AY.40 | 0.050145 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 46 | 46 | AY.10 | 0.024377 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 45 | 45 | AY.25 | 0.000271 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 45 | 45 | B.1.1 | 0.000816 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 44 | 44 | AY.105 | 0.028296 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 44 | 44 | AY.9.2 | 0.001616 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 42 | 42 | AY.64 | 0.025 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 41 | 41 | AY.39 | 0.001013 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 37 | 37 | B | 0.004729 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 33 | 33 | AY.46 | 0.003435 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 33 | 33 | AY.47 | 0.001026 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 32 | 32 | B.1.609 | 0.01534 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 28 | 28 | AY.35 | 0.006525 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 27 | 27 | AY.70 | 0.00563 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 25 | 25 | AY.103 | 0.000155 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 25 | 25 | AY.61 | 0.002619 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 25 | 25 | B.1.177 | 0.000329 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 23 | 23 | AY.117 | 0.001944 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 22 | 22 | B.1.2 | 0.000194 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 21 | 21 | AY.33 | 0.001402 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 21 | 21 | AY.73 | 0.013972 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 21 | 21 | Q.3 | 0.003046 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 19 | 19 | AY.5.4 | 0.005257 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 19 | 19 | AY.67 | 0.008821 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 19 | 19 | B.1.258.24 | 0.204301 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 18 | 18 | AY.34 | 0.001745 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 18 | 18 | B.1.526 | 0.000423 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 17 | 17 | AY.37 | 0.005373 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 17 | 17 | AY.9.1 | 0.001423 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 16 | 16 | AY.56 | 0.025682 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 15 | 15 | AY.23 | 0.001046 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 15 | 15 | AY.3 | 0.000149 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 15 | 15 | AY.78 | 0.023112 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 14 | 14 | AY.86 | 0.011618 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 12 | 12 | AY.42 | 0.000483 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 12 | 12 | P.1 | 0.000189 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 11 | 11 | AY.29 | 0.000174 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 11 | 11 | AY.59 | 0.005826 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 11 | 11 | AY.7.1 | 0.00124 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 11 | 11 | AY.85 | 0.004699 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 10 | 10 | AY.102 | 0.000265 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 10 | 10 | B.1.1.70 | 0.003411 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 10 | 10 | B.1.243 | 0.000696 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 10 | 10 | B.1.258.4 | 0.034483 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 9 | 9 | AY.119 | 0.000318 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 9 | 9 | AY.58 | 0.008167 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 8 | 8 | AY.110 | 0.000902 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 8 | 8 | AY.24 | 0.003448 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 8 | 8 | AY.4.2 | 0.000174 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 8 | 8 | B.1.160 | 0.00025 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 8 | 8 | B.1.429 | 0.000188 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 7 | 7 | AY.11 | 0.009371 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 7 | 7 | AY.77 | 0.007892 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 7 | 7 | B.4.1 | 0.132075 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | AY.106 | 0.002009 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | AY.114 | 0.001387 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | AY.5 | 0.000124 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | AY.84 | 0.002625 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 6 | 6 | B.1.375 | 0.004918 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5 | 5 | AY.28 | 0.009452 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5 | 5 | AY.30 | 0.001979 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5 | 5 | AY.46.2 | 0.003177 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5 | 5 | AY.71 | 0.002375 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5 | 5 | AY.81 | 0.00996 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 5 | 5 | B.1.214 | 0.018315 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.4.2.1 | 0.000596 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.66 | 0.004278 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.7.2 | 0.002237 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.87 | 0.003331 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.93 | 0.001092 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | B.1.1.316 | 0.0037 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | B.1.1.432 | 0.005063 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | B.1.39 | 0.015625 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.72 | 0.004082 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | AY.95 | 0.002283 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | B.1.588 | 0.00273 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.22 | 0.004184 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.1.308 | 0.023529 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.1.347 | 0.036364 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 2 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 46 | P46L | cCT | cTC | 1 | 2 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.362 | 0.003082 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | B.1.634 | 0.006849 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | A.23 | 0.010526 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.177.31 | 0.011494 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.212 | 0.016667 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.507 | 0.011236 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.38 | 0.02381 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | C.18 | 0.002591 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 46 | P46L | cCt | cTt | 1 | 1 | R.2 | 0.014493 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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