CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P412P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B412P412PP6337PsynccTccA5183350.64671819273-19275
ORF1ab/nsp14A2-B412P412PP6337PsynccTccC5181220.23552119273-19275
ORF1ab/nsp14A2-B412P412PP6337PsynccTccG518610.11776119273-19275

Details of the mutation P412P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B412P412PccTccA335518All0.000064
ORF1ab/nsp14A2-B412P412PccTccC122518All0.000023
ORF1ab/nsp14A2-B412P412PccTccG61518All0.000012
ORF1ab/nsp14A2-B412P412PccTccA205209AY.40.000319
ORF1ab/nsp14A2-B412P412PccTccC3209AY.40.000005
ORF1ab/nsp14A2-B412P412PccTccG1209AY.40.000002
ORF1ab/nsp14A2-B412P412PccTccG4776B.1.1.70.000042
ORF1ab/nsp14A2-B412P412PccTccC1876B.1.1.70.000016
ORF1ab/nsp14A2-B412P412PccTccA1176B.1.1.70.00001
ORF1ab/nsp14A2-B412P412PccTccA5656B.1.1.4040.888889
ORF1ab/nsp14A2-B412P412PccTccA1619B.1.10.00029
ORF1ab/nsp14A2-B412P412PccTccC319B.1.10.000054
ORF1ab/nsp14A2-B412P412PccTccC1316AY.440.000079
ORF1ab/nsp14A2-B412P412PccTccA316AY.440.000018
ORF1ab/nsp14A2-B412P412PccTccC1112P.10.000173
ORF1ab/nsp14A2-B412P412PccTccA112P.10.000016
ORF1ab/nsp14A2-B412P412PccTccC1111B.1.1770.000145
ORF1ab/nsp14A2-B412P412PccTccA1010B.1.1310.087719
ORF1ab/nsp14A2-B412P412PccTccA48B.1.617.20.000015
ORF1ab/nsp14A2-B412P412PccTccC38B.1.617.20.000011
ORF1ab/nsp14A2-B412P412PccTccG18B.1.617.20.000004
ORF1ab/nsp14A2-B412P412PccTccG77AY.390.000173
ORF1ab/nsp14A2-B412P412PccTccA47B.1.20.000035
ORF1ab/nsp14A2-B412P412PccTccC37B.1.20.000026
ORF1ab/nsp14A2-B412P412PccTccC56B.10.000046
ORF1ab/nsp14A2-B412P412PccTccA16B.10.000009
ORF1ab/nsp14A2-B412P412PccTccC55B.1.177.570.001405
ORF1ab/nsp14A2-B412P412PccTccA240.111111
ORF1ab/nsp14A2-B412P412PccTccG240.111111
ORF1ab/nsp14A2-B412P412PccTccC44AY.30.00004
ORF1ab/nsp14A2-B412P412PccTccC34AY.4.50.000322
ORF1ab/nsp14A2-B412P412PccTccA14AY.4.50.000107
ORF1ab/nsp14A2-B412P412PccTccC44AY.50.000083
ORF1ab/nsp14A2-B412P412PccTccC34P.1.140.000143
ORF1ab/nsp14A2-B412P412PccTccA14P.1.140.000048
ORF1ab/nsp14A2-B412P412PccTccA33AY.116.10.000934
ORF1ab/nsp14A2-B412P412PccTccC33AY.250.000018
ORF1ab/nsp14A2-B412P412PccTccA13AY.430.000004
ORF1ab/nsp14A2-B412P412PccTccG13AY.430.000004
ORF1ab/nsp14A2-B412P412PccTccC13AY.430.000004
ORF1ab/nsp14A2-B412P412PccTccA33B.1.1.1690.054545
ORF1ab/nsp14A2-B412P412PccTccC33B.1.1.3050.011583
ORF1ab/nsp14A2-B412P412PccTccC33B.1.36.290.001552
ORF1ab/nsp14A2-B412P412PccTccC22AY.1030.000012
ORF1ab/nsp14A2-B412P412PccTccC22AY.260.000057
ORF1ab/nsp14A2-B412P412PccTccC12AY.4.20.000022
ORF1ab/nsp14A2-B412P412PccTccG12AY.4.20.000022
ORF1ab/nsp14A2-B412P412PccTccA22AY.470.000062
ORF1ab/nsp14A2-B412P412PccTccA22B.1.1.250.001137
ORF1ab/nsp14A2-B412P412PccTccA22B.1.1.2940.002532
ORF1ab/nsp14A2-B412P412PccTccC22B.1.1.5190.000079
ORF1ab/nsp14A2-B412P412PccTccC22B.1.1600.000062
ORF1ab/nsp14A2-B412P412PccTccC11AY.1020.000027
ORF1ab/nsp14A2-B412P412PccTccA11AY.1130.000142
ORF1ab/nsp14A2-B412P412PccTccC11AY.1190.000035
ORF1ab/nsp14A2-B412P412PccTccC11AY.200.000039
ORF1ab/nsp14A2-B412P412PccTccC11AY.230.00007
ORF1ab/nsp14A2-B412P412PccTccC11AY.3.10.000085
ORF1ab/nsp14A2-B412P412PccTccA11AY.39.10.00004
ORF1ab/nsp14A2-B412P412PccTccA11B.1.1.1740.003378
ORF1ab/nsp14A2-B412P412PccTccC11B.1.1.2160.00089
ORF1ab/nsp14A2-B412P412PccTccG11B.1.1.2540.011236
ORF1ab/nsp14A2-B412P412PccTccA11B.1.1.3180.000302
ORF1ab/nsp14A2-B412P412PccTccC11B.1.1.3730.02381
ORF1ab/nsp14A2-B412P412PccTccA11B.1.2320.000537
ORF1ab/nsp14A2-B412P412PccTccA11B.1.2580.000067
ORF1ab/nsp14A2-B412P412PccTccC11B.1.3240.001605
ORF1ab/nsp14A2-B412P412PccTccC11B.1.3510.00003
ORF1ab/nsp14A2-B412P412PccTccC11B.1.36.80.001
ORF1ab/nsp14A2-B412P412PccTccC11B.1.3990.001934
ORF1ab/nsp14A2-B412P412PccTccC11B.1.4290.000024
ORF1ab/nsp14A2-B412P412PccTccC11B.1.5320.006211
ORF1ab/nsp14A2-B412P412PccTccC11B.1.6230.000536
ORF1ab/nsp14A2-B412P412PccTccA11C.370.000116