CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P412L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B412P412LP6337LnonsyncCtcTt2922880.98630119273-19275
ORF1ab/nsp14A2-B412P412LP6337LnonsyncCTcTA29220.0068493219273-19275
ORF1ab/nsp14A2-B412P412LP6337LnonsyncCTcTG29220.0068493219273-19275

Details of the mutation P412L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B412P412LcCtcTt288292All0.000055
ORF1ab/nsp14A2-B412P412LcCTcTG2292All0
ORF1ab/nsp14A2-B412P412LcCTcTA2292All0
ORF1ab/nsp14A2-B412P412LcCtcTt8383B.1.1.70.000074
ORF1ab/nsp14A2-B412P412LcCtcTt1919AY.30.000189
ORF1ab/nsp14A2-B412P412LcCtcTt1717AY.40.000026
ORF1ab/nsp14A2-B412P412LcCtcTt1616B.1.2210.001137
ORF1ab/nsp14A2-B412P412LcCtcTt1313B.1.1600.000405
ORF1ab/nsp14A2-B412P412LcCtcTt1111B.1.20.000097
ORF1ab/nsp14A2-B412P412LcCtcTt99AY.440.000055
ORF1ab/nsp14A2-B412P412LcCtcTt99AY.580.008167
ORF1ab/nsp14A2-B412P412LcCtcTt77B.1.3110.001922
ORF1ab/nsp14A2-B412P412LcCtcTt77B.1.5260.000165
ORF1ab/nsp14A2-B412P412LcCtcTt77P.10.00011
ORF1ab/nsp14A2-B412P412LcCtcTt260.111111
ORF1ab/nsp14A2-B412P412LcCTcTG260.111111
ORF1ab/nsp14A2-B412P412LcCTcTA260.111111
ORF1ab/nsp14A2-B412P412LcCtcTt66B.1.4290.000141
ORF1ab/nsp14A2-B412P412LcCtcTt55B.1.177.780.048544
ORF1ab/nsp14A2-B412P412LcCtcTt55B.1.177.90.006658
ORF1ab/nsp14A2-B412P412LcCtcTt44B.10.000037
ORF1ab/nsp14A2-B412P412LcCtcTt33AY.75.10.000541
ORF1ab/nsp14A2-B412P412LcCtcTt33AY.9.20.00011
ORF1ab/nsp14A2-B412P412LcCtcTt33B.1.10.000054
ORF1ab/nsp14A2-B412P412LcCtcTt33B.1.1.280.000934
ORF1ab/nsp14A2-B412P412LcCtcTt33B.1.1.5190.000119
ORF1ab/nsp14A2-B412P412LcCtcTt33B.1.4590.012245
ORF1ab/nsp14A2-B412P412LcCtcTt33D.20.000225
ORF1ab/nsp14A2-B412P412LcCtcTt22AY.1030.000012
ORF1ab/nsp14A2-B412P412LcCtcTt22AY.430.000009
ORF1ab/nsp14A2-B412P412LcCtcTt22B0.000256
ORF1ab/nsp14A2-B412P412LcCtcTt22B.1.1770.000026
ORF1ab/nsp14A2-B412P412LcCtcTt22B.1.177.770.001452
ORF1ab/nsp14A2-B412P412LcCtcTt22B.1.3510.000059
ORF1ab/nsp14A2-B412P412LcCtcTt22B.1.36.80.002
ORF1ab/nsp14A2-B412P412LcCtcTt22B.1.4270.000101
ORF1ab/nsp14A2-B412P412LcCtcTt22B.1.5250.000226
ORF1ab/nsp14A2-B412P412LcCtcTt22P.20.000373
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.1130.000142
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.1170.000085
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.1180.000063
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.1200.000037
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.140.000088
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.250.000006
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.260.000028
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.270.000065
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.470.000031
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.680.000274
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.720.001361
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.910.00073
ORF1ab/nsp14A2-B412P412LcCtcTt11AY.99.20.000092
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.1.250.000569
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.1.2940.001266
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.1.3170.000412
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.1.500.000679
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.1.5230.001563
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.177.210.000076
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.2340.000132
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.2650.001271
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.3010.005917
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.36.390.002217
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.3750.00082
ORF1ab/nsp14A2-B412P412LcCtcTt11B.1.438.10.000107
ORF1ab/nsp14A2-B412P412LcCtcTt11P.1.20.001156
ORF1ab/nsp14A2-B412P412LcCtcTt11Q.80.000165