CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P239del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B239P239del1P6164del1delccGcc-320.66666718754-18756
ORF1ab/nsp14A2-B239P239del1P6164del1delCcg-cg310.33333318754-18756

Details of the mutation P239del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B239P239del1ccGcc-23All0
ORF1ab/nsp14A2-B239P239del1Ccg-cg13All0
ORF1ab/nsp14A2-B239P239del1ccGcc-11AY.390.000025
ORF1ab/nsp14A2-B239P239del1ccGcc-11AY.440.000006
ORF1ab/nsp14A2-B239P239del1Ccg-cg11B.1.1.70.000001