CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P239L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B239P239LP6164LnonsyncCgcTg2122100.99056618754-18756
ORF1ab/nsp14A2-B239P239LP6164LnonsyncCGcTT21220.0094339618754-18756

Details of the mutation P239L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B239P239LcCgcTg210212All0.00004
ORF1ab/nsp14A2-B239P239LcCGcTT2212All0
ORF1ab/nsp14A2-B239P239LcCgcTg7272B.1.1.70.000064
ORF1ab/nsp14A2-B239P239LcCgcTg3434AY.40.000053
ORF1ab/nsp14A2-B239P239LcCgcTg2323B.1.4290.000541
ORF1ab/nsp14A2-B239P239LcCgcTg1515AY.430.000066
ORF1ab/nsp14A2-B239P239LcCgcTg1212B.1.10.000218
ORF1ab/nsp14A2-B239P239LcCgcTg77AY.250.000042
ORF1ab/nsp14A2-B239P239LcCgcTg66B.10.000055
ORF1ab/nsp14A2-B239P239LcCgcTg34AY.440.000018
ORF1ab/nsp14A2-B239P239LcCGcTT14AY.440.000006
ORF1ab/nsp14A2-B239P239LcCgcTg33A.20.001985
ORF1ab/nsp14A2-B239P239LcCgcTg33AY.1030.000019
ORF1ab/nsp14A2-B239P239LcCgcTg33B.1.1770.00004
ORF1ab/nsp14A2-B239P239LcCgcTg33B.1.177.600.000655
ORF1ab/nsp14A2-B239P239LcCgcTg33B.1.617.20.000011
ORF1ab/nsp14A2-B239P239LcCgcTg22AY.30.00002
ORF1ab/nsp14A2-B239P239LcCgcTg22AY.470.000062
ORF1ab/nsp14A2-B239P239LcCgcTg22AY.610.00021
ORF1ab/nsp14A2-B239P239LcCgcTg22B.1.20.000018
ORF1ab/nsp14A2-B239P239LcCgcTg22B.1.360.000292
ORF1ab/nsp14A2-B239P239LcCgcTg12B.1.5800.004065
ORF1ab/nsp14A2-B239P239LcCGcTT12B.1.5800.004065
ORF1ab/nsp14A2-B239P239LcCgcTg22P.10.000032
ORF1ab/nsp14A2-B239P239LcCgcTg11AY.340.000097
ORF1ab/nsp14A2-B239P239LcCgcTg11AY.390.000025
ORF1ab/nsp14A2-B239P239LcCgcTg11AY.480.000465
ORF1ab/nsp14A2-B239P239LcCgcTg11AY.590.00053
ORF1ab/nsp14A2-B239P239LcCgcTg11B.1.1.500.000679
ORF1ab/nsp14A2-B239P239LcCgcTg11B.1.177.820.000477
ORF1ab/nsp14A2-B239P239LcCgcTg11B.1.4270.00005
ORF1ab/nsp14A2-B239P239LcCgcTg11B.1.5260.000024
ORF1ab/nsp14A2-B239P239LcCgcTg11B.1.5960.000087
ORF1ab/nsp14A2-B239P239LcCgcTg11P.30.001595