CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = P203L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp14A2-B	203	P203L	P6128L	nonsyn	cCt	cTt	11985	11984	0.999917	18646-18648
ORF1ab/nsp14A2-B	203	P203L	P6128L	nonsyn	cCT	cTC	11985	1	0.0000834376	18646-18648

Details of the mutation P203L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	11984	11985	All	0.002292
ORF1ab/nsp14A2-B	203	P203L	cCT	cTC	1	11985	All	0
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5616	5616	B.1.1.7	0.005028
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	858	858	AY.34	0.083196
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	711	711	AY.4	0.001107
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	307	307	B.1.351	0.009126
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	295	295	B.1.2	0.002598
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	253	253	B.1.1.39	0.12895
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	214	214	AY.26	0.006058
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	203	203	P.1.9	0.975962
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	203	203	W.2	0.980676
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	193	193	B.1.617.2	0.000727
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	159	159	B.1	0.001456
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	153	153	AY.103	0.00095
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	140	140	AY.43	0.00062
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	126	126	P.1	0.001985
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	119	119	B.1.177	0.001567
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	115	115	B.1.429	0.002706
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	107	107	AY.71	0.050831
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	97	97	B.1.1.519	0.003852
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	89	89	AY.4.2	0.00193
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	83	83	AY.44	0.000505
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	82	82	P.1.7	0.026181
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	76	76	AY.25	0.000457
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	67	68	B.1.1	0.001215
ORF1ab/nsp14A2-B	203	P203L	cCT	cTC	1	68	B.1.1	0.000018
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	63	63	A.15	1
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	60	60	AY.119	0.002118
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	59	59	AY.6	0.002427
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	56	56	AY.3	0.000557
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	53	53	B.1.526	0.001246
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	52	52	B.1.1.205	0.193309
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	50	50	AY.29	0.000789
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	47	47	B.1.637	0.003434
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	34	34	B.1.1.50	0.023082
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	32	32	AY.46.6	0.002311
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	32	32	B.1.427	0.001616
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	31	31	B.1.221	0.002202
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	30	30	AY.102	0.000795
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	28	28	AY.5	0.000578
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	27	27	N.1	0.457627
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	26	26	AY.100	0.001196
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	24	24	AY.14	0.002112
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	24	24	B.1.36.18	0.010084
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	23	23	AY.120	0.000855
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	23	23	AY.39	0.000568
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	19	19	B.1.258	0.001264
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	18	18	A.23.1	0.012676
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	17	17	AY.20	0.000661
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	17	17	B.1.596	0.001481
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	15	15	AE.8	0.007335
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	15	15	AY.121	0.00203
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	15	15	B.1.243	0.001044
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	15	15	B.1.525	0.001697
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	15	15	B.1.621	0.001328
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	15	15	B.55	0.044248
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	14	14	AY.111	0.002564
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	14	14	AY.42	0.000563
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	14	14	B.1.160	0.000437
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	13	13	AY.62	0.005664
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	13	13	B	0.001662
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	13	13	B.1.258.17	0.001352
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	13	13	B.1.438.1	0.001394
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	12	12	AY.3.1	0.001023
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	12	12	AY.47	0.000373
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	12	12	B.1.36	0.001751
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	11	11	B.1.1.47	0.058824
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	10	10	AY.39.1	0.000396
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	10	10	B.1.177.44	0.005189
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	10	10	B.1.234	0.001319
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	10	10	B.1.411	0.037037
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	10	10	C.1	0.023923
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	9	9	AY.113	0.001282
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	9	9	AY.23	0.000628
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	9	9	B.1.375	0.007377
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	9	9	L.3	0.031915
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	AY.107	0.003728
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	AY.118	0.000501
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	AY.54	0.000763
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	AY.79	0.009685
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	AY.83	0.013793
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	B.1.1.241	0.016563
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	B.1.177.81	0.001515
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	8	8	P.1.14	0.000382
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	AY.110	0.000789
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	AY.45	0.000852
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	AY.69	0.001307
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	AY.9.2	0.000257
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	B.1.1.25	0.00398
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	B.1.1.318	0.002112
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	C.37	0.000812
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	P.1.15	0.001626
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	7	7	Q.8	0.001154
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	AY.33	0.000401
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	AY.98.1	0.000291
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	B.1.1.28	0.001867
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	B.1.177.60	0.001311
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	D.2	0.00045
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	Q.1	0.000758
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	6	6	R.1	0.00054
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	A.27	0.008278
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	AY.13	0.000805
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	AY.4.2.1	0.000745
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	AY.75	0.00028
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	B.1.1.214	0.000277
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	B.1.1.221	0.050505
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	B.1.1.448	0.010163
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	B.1.400	0.002145
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	B.1.575	0.001517
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	B.1.577	0.003436
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	5	5	P.1.2	0.00578
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	AY.120.2.1	0.001993
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	AY.9	0.00027
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	AY.98	0.000316
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	AY.99.2	0.000369
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	AZ.2	0.003284
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	B.1.1.161	0.014134
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	B.1.177.77	0.002905
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	B.1.177.86	0.000734
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	B.1.351.3	0.003506
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	B.1.617.1	0.000516
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	B.1.628	0.001409
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	C.36.1	0.016598
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	P.1.10	0.001078
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	4	4	Q.3	0.00058
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.27	0.000194
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.41	0.000882
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.5.3	0.001012
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.5.4	0.00083
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.65	0.001599
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.70	0.000626
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.74	0.000347
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.78	0.004622
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.93	0.000819
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	AY.95	0.002283
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.1.101	0.03
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.1.153	0.003286
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.1.284	0.000322
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.1.294	0.003797
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.1.306	0.001315
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.1.348	0.002389
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.111	0.003525
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.214.2	0.001799
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.351.2	0.000908
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.538	0.024194
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.561	0.001191
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	B.1.576	0.00272
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	P.1.1	0.000953
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	3	3	P.2	0.00056
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	A	0.000774
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	A.17	0.181818
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	A.2.5	0.000998
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.10	0.00106
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.106	0.00067
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.108	0.002205
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.116.1	0.000623
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.117	0.000169
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.120.1	0.000642
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.16.1	0.00094
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.19	0.002281
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.35	0.000466
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.36	0.000296
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.37	0.000632
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.38	0.000999
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.4.4	0.000818
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.46.4	0.000329
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.48	0.00093
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.59	0.001059
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.61	0.00021
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.68	0.000547
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.72	0.002721
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.75.1	0.000361
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.85	0.000854
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.86	0.00166
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.9.1	0.000167
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	AY.9.2.1	0.003953
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.1.219	0.01
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.1.222	0.000408
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.1.291	0.001485
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.1.324	0.105263
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.1.37	0.000386
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.1.416	0.00181
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.177.3	0.015267
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.177.56	0.001335
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.177.65	0.001331
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.177.73	0.001133
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.265	0.002541
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.311	0.000549
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.315	0.012121
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.36.25	0.004415
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.36.29	0.001035
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.369	0.00057
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.382	0.017857
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.396	0.001411
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.425	0.005988
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.466.2	0.000782
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.468	0.011429
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.470	0.002809
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.497	0.00063
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.560	0.009259
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.620	0.001892
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	B.1.623	0.001073
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	C.14	0.008658
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	C.36.3	0.001134
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	2	2	P.1.17	0.000324
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1		0.055556
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AN.1	0.02
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AU.3	0.00211
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.101	0.00049
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.109	0.00074
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.114	0.000231
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.16	0.00038
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.30	0.000396
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.32	0.000532
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.39.2	0.001541
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.4.5	0.000107
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.46.2	0.000635
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.52	0.000814
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.55	0.000917
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.56	0.001605
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.63	0.000387
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.7	0.000196
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.7.1	0.000113
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.73	0.000665
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.76	0.004831
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.77	0.001127
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.84	0.000437
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.92	0.000287
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	AY.99	0.001049
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.141	0.002012
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.170	0.001247
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.176	0.000439
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.196	0.005714
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.210	0.005714
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.216	0.00089
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.230	0.009174
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.265	0.003155
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.289	0.002083
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.305	0.003861
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.311	0.000358
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.312	0.001912
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.316	0.000925
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.326	0.001761
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.329	0.003846
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.33	0.000421
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.354	0.004386
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.397	0.002252
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.409	0.002833
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.432	0.001266
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.486	0.001577
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.523	0.001563
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.526	0.003546
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.1.70	0.000341
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.126	0.001276
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.160.32	0.004292
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.177.15	0.000631
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.177.52	0.001757
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.177.62	0.001192
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.177.7	0.000165
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.177.82	0.000477
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.177.83	0.001481
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.223	0.002778
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.232	0.000537
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.306	0.005714
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.320	0.001245
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.333	0.010526
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.346	0.001311
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.36.1	0.00114
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.36.31	0.001751
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.362	0.001541
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.367	0.000792
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.399	0.001934
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.404	0.001302
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.416	0.001269
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.459	0.004082
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.473	0.019231
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.499	0.00105
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.501	0.007353
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.509	0.000866
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.549	0.007194
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.551	0.00129
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.575.2	0.004808
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.581	0.009434
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.582	0.000491
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.587	0.001898
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.597	0.00463
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.619	0.000871
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.625	0.002353
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.633	0.041667
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.1.93	0.000934
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.29	0.003509
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.40	0.000364
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	B.6.3	0.026316
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	C.30	0.001727
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	C.36	0.000911
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	P.1.16	0.000374
ORF1ab/nsp14A2-B	203	P203L	cCt	cTt	1	1	Q.4	0.000455

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.