CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = M501del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B501M501del2M6426del2delATg--g830.37519540-19542
ORF1ab/nsp14A2-B501M501del2M6426del2delATG--A820.2519540-19542
ORF1ab/nsp14A2-B501M501del2M6426del2delATG--N820.2519540-19542
ORF1ab/nsp14A2-B501M501del2M6426del2delaTGa--810.12519540-19542

Details of the mutation M501del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B501M501del2ATg--g38All0.000001
ORF1ab/nsp14A2-B501M501del2ATG--A28All0
ORF1ab/nsp14A2-B501M501del2ATG--N28All0
ORF1ab/nsp14A2-B501M501del2aTGa--18All0
ORF1ab/nsp14A2-B501M501del2ATG--A220.111111
ORF1ab/nsp14A2-B501M501del2ATG--N22B.1.20.000018
ORF1ab/nsp14A2-B501M501del2ATg--g11AY.1100.000113
ORF1ab/nsp14A2-B501M501del2aTGa--11AY.200.000039
ORF1ab/nsp14A2-B501M501del2ATg--g11AY.5.30.000337
ORF1ab/nsp14A2-B501M501del2ATg--g11B.1.10.000018