CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = M501del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B501M501del1M6426del1delAtg-tg28210.7519540-19542
ORF1ab/nsp14A2-B501M501del1M6426del1delATG-NN2840.14285719540-19542
ORF1ab/nsp14A2-B501M501del1M6426del1delatGat-2820.071428619540-19542
ORF1ab/nsp14A2-B501M501del1M6426del1delAtG-tN2810.035714319540-19542

Details of the mutation M501del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B501M501del1Atg-tg2128All0.000004
ORF1ab/nsp14A2-B501M501del1ATG-NN428All0.000001
ORF1ab/nsp14A2-B501M501del1atGat-228All0
ORF1ab/nsp14A2-B501M501del1AtG-tN128All0
ORF1ab/nsp14A2-B501M501del1Atg-tg1213B.1.1.70.000011
ORF1ab/nsp14A2-B501M501del1atGat-113B.1.1.70.000001
ORF1ab/nsp14A2-B501M501del1ATG-NN13B.1.20.000009
ORF1ab/nsp14A2-B501M501del1AtG-tN13B.1.20.000009
ORF1ab/nsp14A2-B501M501del1atGat-13B.1.20.000009
ORF1ab/nsp14A2-B501M501del1Atg-tg22AY.960.004149
ORF1ab/nsp14A2-B501M501del1ATG-NN11AY.250.000006
ORF1ab/nsp14A2-B501M501del1Atg-tg11AY.4.50.000107
ORF1ab/nsp14A2-B501M501del1Atg-tg11AY.46.60.000072
ORF1ab/nsp14A2-B501M501del1Atg-tg11AY.700.000209
ORF1ab/nsp14A2-B501M501del1Atg-tg11AY.9.20.000037
ORF1ab/nsp14A2-B501M501del1Atg-tg11AY.940.000443
ORF1ab/nsp14A2-B501M501del1Atg-tg11B.1.1.3180.000302
ORF1ab/nsp14A2-B501M501del1Atg-tg11B.1.2430.00007
ORF1ab/nsp14A2-B501M501del1ATG-NN11B.1.4290.000024
ORF1ab/nsp14A2-B501M501del1ATG-NN11B.1.5260.000024