CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = M501R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B501M501RM6426RnonsynaTgaGg20170.8519540-19542
ORF1ab/nsp14A2-B501M501RM6426RnonsynaTGaGA2030.1519540-19542

Details of the mutation M501R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B501M501RaTgaGg1720All0.000003
ORF1ab/nsp14A2-B501M501RaTGaGA320All0.000001
ORF1ab/nsp14A2-B501M501RaTgaGg67B.1.1.70.000005
ORF1ab/nsp14A2-B501M501RaTGaGA17B.1.1.70.000001
ORF1ab/nsp14A2-B501M501RaTgaGg44B.1.617.20.000015
ORF1ab/nsp14A2-B501M501RaTGaGA12AY.1100.000113
ORF1ab/nsp14A2-B501M501RaTgaGg12AY.1100.000113
ORF1ab/nsp14A2-B501M501RaTgaGg11A.2.40.003367
ORF1ab/nsp14A2-B501M501RaTGaGA11AY.30.00001
ORF1ab/nsp14A2-B501M501RaTgaGg11AY.40.000002
ORF1ab/nsp14A2-B501M501RaTgaGg11AY.430.000004
ORF1ab/nsp14A2-B501M501RaTgaGg11AY.9.20.000037
ORF1ab/nsp14A2-B501M501RaTgaGg11AY.980.000079
ORF1ab/nsp14A2-B501M501RaTgaGg11B.10.000009