CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = M501I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B501M501IM6426InonsynatGatT10644103150.96909119540-19542
ORF1ab/nsp14A2-B501M501IM6426InonsynatGatA106442660.024990619540-19542
ORF1ab/nsp14A2-B501M501IM6426InonsynatGatC10644630.0059188319540-19542

Details of the mutation M501I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B501M501IatGatT1031510644All0.001973
ORF1ab/nsp14A2-B501M501IatGatA26610644All0.000051
ORF1ab/nsp14A2-B501M501IatGatC6310644All0.000012
ORF1ab/nsp14A2-B501M501IatGatT42604261AD.20.932779
ORF1ab/nsp14A2-B501M501IatGatC14261AD.20.000219
ORF1ab/nsp14A2-B501M501IatGatT12471333B.1.1.70.001116
ORF1ab/nsp14A2-B501M501IatGatA681333B.1.1.70.000061
ORF1ab/nsp14A2-B501M501IatGatC181333B.1.1.70.000016
ORF1ab/nsp14A2-B501M501IatGatT427462B.1.617.20.001608
ORF1ab/nsp14A2-B501M501IatGatA31462B.1.617.20.000117
ORF1ab/nsp14A2-B501M501IatGatC4462B.1.617.20.000015
ORF1ab/nsp14A2-B501M501IatGatT443453AY.40.000689
ORF1ab/nsp14A2-B501M501IatGatA6453AY.40.000009
ORF1ab/nsp14A2-B501M501IatGatC4453AY.40.000006
ORF1ab/nsp14A2-B501M501IatGatT438438B.1.2430.030478
ORF1ab/nsp14A2-B501M501IatGatT434434AY.1180.02719
ORF1ab/nsp14A2-B501M501IatGatT349349AY.90.023591
ORF1ab/nsp14A2-B501M501IatGatT340340AY.1170.028736
ORF1ab/nsp14A2-B501M501IatGatT229229AD.10.942387
ORF1ab/nsp14A2-B501M501IatGatT216216B.1.4690.779783
ORF1ab/nsp14A2-B501M501IatGatT197197B.1.4480.51706
ORF1ab/nsp14A2-B501M501IatGatT100113B.10.000916
ORF1ab/nsp14A2-B501M501IatGatA13113B.10.000119
ORF1ab/nsp14A2-B501M501IatGatT102102B.1.110.30.073276
ORF1ab/nsp14A2-B501M501IatGatT8393AY.430.000368
ORF1ab/nsp14A2-B501M501IatGatA993AY.430.00004
ORF1ab/nsp14A2-B501M501IatGatC193AY.430.000004
ORF1ab/nsp14A2-B501M501IatGatT9393B.1.1.3150.788136
ORF1ab/nsp14A2-B501M501IatGatT8891B.1.20.000775
ORF1ab/nsp14A2-B501M501IatGatA391B.1.20.000026
ORF1ab/nsp14A2-B501M501IatGatT7782AY.440.000469
ORF1ab/nsp14A2-B501M501IatGatA582AY.440.00003
ORF1ab/nsp14A2-B501M501IatGatT7171AY.290.00112
ORF1ab/nsp14A2-B501M501IatGatT5964AY.250.000355
ORF1ab/nsp14A2-B501M501IatGatA564AY.250.00003
ORF1ab/nsp14A2-B501M501IatGatT5354AY.1030.000329
ORF1ab/nsp14A2-B501M501IatGatC154AY.1030.000006
ORF1ab/nsp14A2-B501M501IatGatT4450AY.30.000438
ORF1ab/nsp14A2-B501M501IatGatA450AY.30.00004
ORF1ab/nsp14A2-B501M501IatGatC250AY.30.00002
ORF1ab/nsp14A2-B501M501IatGatT4550B.1.10.000816
ORF1ab/nsp14A2-B501M501IatGatA450B.1.10.000073
ORF1ab/nsp14A2-B501M501IatGatC150B.1.10.000018
ORF1ab/nsp14A2-B501M501IatGatT4747AY.1020.001246
ORF1ab/nsp14A2-B501M501IatGatT4545B.1.1.2960.818182
ORF1ab/nsp14A2-B501M501IatGatT4444AY.50.000909
ORF1ab/nsp14A2-B501M501IatGatA3641B.1.1.5190.00143
ORF1ab/nsp14A2-B501M501IatGatT541B.1.1.5190.000199
ORF1ab/nsp14A2-B501M501IatGatT4040P.10.00063
ORF1ab/nsp14A2-B501M501IatGatT3232AY.230.002232
ORF1ab/nsp14A2-B501M501IatGatT3232AY.480.014884
ORF1ab/nsp14A2-B501M501IatGatT3232B.1.3510.000951
ORF1ab/nsp14A2-B501M501IatGatT3232Q.80.005277
ORF1ab/nsp14A2-B501M501IatGatT2929B.1.1470.02192
ORF1ab/nsp14A2-B501M501IatGatT2325P.20.004293
ORF1ab/nsp14A2-B501M501IatGatC225P.20.000373
ORF1ab/nsp14A2-B501M501IatGatA2324AY.850.009825
ORF1ab/nsp14A2-B501M501IatGatC124AY.850.000427
ORF1ab/nsp14A2-B501M501IatGatT2023AY.260.000566
ORF1ab/nsp14A2-B501M501IatGatC223AY.260.000057
ORF1ab/nsp14A2-B501M501IatGatA123AY.260.000028
ORF1ab/nsp14A2-B501M501IatGatT1717AY.330.001135
ORF1ab/nsp14A2-B501M501IatGatC917AY.4.20.000195
ORF1ab/nsp14A2-B501M501IatGatT817AY.4.20.000174
ORF1ab/nsp14A2-B501M501IatGatT1616AD.2.10.727273
ORF1ab/nsp14A2-B501M501IatGatT1416AY.46.60.001011
ORF1ab/nsp14A2-B501M501IatGatA216AY.46.60.000144
ORF1ab/nsp14A2-B501M501IatGatT816B.1.5260.000188
ORF1ab/nsp14A2-B501M501IatGatA816B.1.5260.000188
ORF1ab/nsp14A2-B501M501IatGatA1515B.1.1.2220.00306
ORF1ab/nsp14A2-B501M501IatGatT1415B.1.1770.000184
ORF1ab/nsp14A2-B501M501IatGatC115B.1.1770.000013
ORF1ab/nsp14A2-B501M501IatGatT1313AY.1210.001759
ORF1ab/nsp14A2-B501M501IatGatT1313Q.10.001642
ORF1ab/nsp14A2-B501M501IatGatT1012B.1.4290.000235
ORF1ab/nsp14A2-B501M501IatGatA212B.1.4290.000047
ORF1ab/nsp14A2-B501M501IatGatT1111AY.1070.005126
ORF1ab/nsp14A2-B501M501IatGatT1011AY.98.10.000484
ORF1ab/nsp14A2-B501M501IatGatA111AY.98.10.000048
ORF1ab/nsp14A2-B501M501IatGatT1011B.1.2340.001319
ORF1ab/nsp14A2-B501M501IatGatC111B.1.2340.000132
ORF1ab/nsp14A2-B501M501IatGatT610AY.420.000241
ORF1ab/nsp14A2-B501M501IatGatA310AY.420.000121
ORF1ab/nsp14A2-B501M501IatGatC110AY.420.00004
ORF1ab/nsp14A2-B501M501IatGatT99AY.100.004769
ORF1ab/nsp14A2-B501M501IatGatT99B.1.1.2430.036735
ORF1ab/nsp14A2-B501M501IatGatT99B.1.1.4200.009054
ORF1ab/nsp14A2-B501M501IatGatT78AY.1060.002344
ORF1ab/nsp14A2-B501M501IatGatA18AY.1060.000335
ORF1ab/nsp14A2-B501M501IatGatT88AY.840.0035
ORF1ab/nsp14A2-B501M501IatGatT88B.1.1.10.002614
ORF1ab/nsp14A2-B501M501IatGatT88B.1.1.3260.014085
ORF1ab/nsp14A2-B501M501IatGatT88B.1.177.810.001515
ORF1ab/nsp14A2-B501M501IatGatT88B.1.6090.003835
ORF1ab/nsp14A2-B501M501IatGatT67AY.200.000233
ORF1ab/nsp14A2-B501M501IatGatA17AY.200.000039
ORF1ab/nsp14A2-B501M501IatGatT77AY.340.000679
ORF1ab/nsp14A2-B501M501IatGatT77AY.390.000173
ORF1ab/nsp14A2-B501M501IatGatT77B.1.2330.098592
ORF1ab/nsp14A2-B501M501IatGatT66AY.39.10.000238
ORF1ab/nsp14A2-B501M501IatGatT66AY.910.004383
ORF1ab/nsp14A2-B501M501IatGatT56B.1.360.00073
ORF1ab/nsp14A2-B501M501IatGatA16B.1.360.000146
ORF1ab/nsp14A2-B501M501IatGatT66B.1.36.290.003104
ORF1ab/nsp14A2-B501M501IatGatT56B.1.6210.000443
ORF1ab/nsp14A2-B501M501IatGatA16B.1.6210.000089
ORF1ab/nsp14A2-B501M501IatGatT55AY.1080.005513
ORF1ab/nsp14A2-B501M501IatGatT55AY.370.00158
ORF1ab/nsp14A2-B501M501IatGatC35AY.410.000882
ORF1ab/nsp14A2-B501M501IatGatT25AY.410.000588
ORF1ab/nsp14A2-B501M501IatGatT45AY.610.000419
ORF1ab/nsp14A2-B501M501IatGatC15AY.610.000105
ORF1ab/nsp14A2-B501M501IatGatT55AY.7.20.002796
ORF1ab/nsp14A2-B501M501IatGatC35AY.740.000347
ORF1ab/nsp14A2-B501M501IatGatT25AY.740.000231
ORF1ab/nsp14A2-B501M501IatGatT55AZ.30.007599
ORF1ab/nsp14A2-B501M501IatGatT55B.1.1.2140.000277
ORF1ab/nsp14A2-B501M501IatGatC25B.1.1.4340.000697
ORF1ab/nsp14A2-B501M501IatGatT25B.1.1.4340.000697
ORF1ab/nsp14A2-B501M501IatGatA15B.1.1.4340.000349
ORF1ab/nsp14A2-B501M501IatGatT45B.1.2210.000284
ORF1ab/nsp14A2-B501M501IatGatA15B.1.2210.000071
ORF1ab/nsp14A2-B501M501IatGatT45B.1.5960.000349
ORF1ab/nsp14A2-B501M501IatGatA15B.1.5960.000087
ORF1ab/nsp14A2-B501M501IatGatT44AE.50.074074
ORF1ab/nsp14A2-B501M501IatGatT34AY.1100.000338
ORF1ab/nsp14A2-B501M501IatGatA14AY.1100.000113
ORF1ab/nsp14A2-B501M501IatGatT34AY.1160.00086
ORF1ab/nsp14A2-B501M501IatGatA14AY.1160.000287
ORF1ab/nsp14A2-B501M501IatGatT44AY.4.40.001637
ORF1ab/nsp14A2-B501M501IatGatT34AY.460.000312
ORF1ab/nsp14A2-B501M501IatGatA14AY.460.000104
ORF1ab/nsp14A2-B501M501IatGatT44AY.470.000124
ORF1ab/nsp14A2-B501M501IatGatT44AY.530.00115
ORF1ab/nsp14A2-B501M501IatGatT44AY.540.000381
ORF1ab/nsp14A2-B501M501IatGatA34AY.60.000123
ORF1ab/nsp14A2-B501M501IatGatT14AY.60.000041
ORF1ab/nsp14A2-B501M501IatGatT44AY.750.000224
ORF1ab/nsp14A2-B501M501IatGatT44AY.870.003331
ORF1ab/nsp14A2-B501M501IatGatT44AY.9.10.000335
ORF1ab/nsp14A2-B501M501IatGatT34AY.980.000237
ORF1ab/nsp14A2-B501M501IatGatA14AY.980.000079
ORF1ab/nsp14A2-B501M501IatGatT44B0.000511
ORF1ab/nsp14A2-B501M501IatGatT44B.1.1.1890.006051
ORF1ab/nsp14A2-B501M501IatGatT44B.1.1.4310.064516
ORF1ab/nsp14A2-B501M501IatGatT44B.1.1600.000125
ORF1ab/nsp14A2-B501M501IatGatT44B.1.160.100.032258
ORF1ab/nsp14A2-B501M501IatGatT44B.1.2580.000266
ORF1ab/nsp14A2-B501M501IatGatT44B.1.4620.028986
ORF1ab/nsp14A2-B501M501IatGatT44B.1.466.20.001565
ORF1ab/nsp14A2-B501M501IatGatT44B.1.5170.001708
ORF1ab/nsp14A2-B501M501IatGatT33A0.001161
ORF1ab/nsp14A2-B501M501IatGatT33A.2.50.001497
ORF1ab/nsp14A2-B501M501IatGatT23AY.1190.000071
ORF1ab/nsp14A2-B501M501IatGatA13AY.1190.000035
ORF1ab/nsp14A2-B501M501IatGatT33AY.570.001969
ORF1ab/nsp14A2-B501M501IatGatT33AY.75.10.000541
ORF1ab/nsp14A2-B501M501IatGatT33B.1.1.330.001263
ORF1ab/nsp14A2-B501M501IatGatT33B.1.1.670.013699
ORF1ab/nsp14A2-B501M501IatGatT33B.1.1260.003827
ORF1ab/nsp14A2-B501M501IatGatT33B.1.2360.00616
ORF1ab/nsp14A2-B501M501IatGatT33B.1.617.10.000387
ORF1ab/nsp14A2-B501M501IatGatT33B.1.6370.000219
ORF1ab/nsp14A2-B501M501IatGatT33P.1.100.000808
ORF1ab/nsp14A2-B501M501IatGatT33R.10.00027
ORF1ab/nsp14A2-B501M501IatGatT220.111111
ORF1ab/nsp14A2-B501M501IatGatT22AY.1050.001286
ORF1ab/nsp14A2-B501M501IatGatA12AY.1110.000183
ORF1ab/nsp14A2-B501M501IatGatT12AY.1110.000183
ORF1ab/nsp14A2-B501M501IatGatA12AY.130.000161
ORF1ab/nsp14A2-B501M501IatGatT12AY.130.000161
ORF1ab/nsp14A2-B501M501IatGatT22AY.160.000759
ORF1ab/nsp14A2-B501M501IatGatT22AY.16.10.00094
ORF1ab/nsp14A2-B501M501IatGatT22AY.240.000862
ORF1ab/nsp14A2-B501M501IatGatT22AY.270.000129
ORF1ab/nsp14A2-B501M501IatGatT22AY.4.50.000215
ORF1ab/nsp14A2-B501M501IatGatT22AY.450.000243
ORF1ab/nsp14A2-B501M501IatGatA22AY.46.50.000397
ORF1ab/nsp14A2-B501M501IatGatT22AY.770.002255
ORF1ab/nsp14A2-B501M501IatGatT22AY.9.20.000073
ORF1ab/nsp14A2-B501M501IatGatT22B.1.1.250.001137
ORF1ab/nsp14A2-B501M501IatGatC12B.1.1.280.000311
ORF1ab/nsp14A2-B501M501IatGatT12B.1.1.280.000311
ORF1ab/nsp14A2-B501M501IatGatT22B.1.1.4850.033333
ORF1ab/nsp14A2-B501M501IatGatA22B.1.1.5150.04
ORF1ab/nsp14A2-B501M501IatGatT22B.1.1.80.007168
ORF1ab/nsp14A2-B501M501IatGatT22B.1.177.750.002081
ORF1ab/nsp14A2-B501M501IatGatA12B.1.4270.00005
ORF1ab/nsp14A2-B501M501IatGatT12B.1.4270.00005
ORF1ab/nsp14A2-B501M501IatGatC12B.1.438.10.000107
ORF1ab/nsp14A2-B501M501IatGatT12B.1.438.10.000107
ORF1ab/nsp14A2-B501M501IatGatT22B.1.4700.002809
ORF1ab/nsp14A2-B501M501IatGatT12B.1.4970.000315
ORF1ab/nsp14A2-B501M501IatGatA12B.1.4970.000315
ORF1ab/nsp14A2-B501M501IatGatT12C.370.000116
ORF1ab/nsp14A2-B501M501IatGatA12C.370.000116
ORF1ab/nsp14A2-B501M501IatGatC22P.60.006289
ORF1ab/nsp14A2-B501M501IatGatT11A.10.000282
ORF1ab/nsp14A2-B501M501IatGatT11AP.10.001502
ORF1ab/nsp14A2-B501M501IatGatT11AY.1000.000046
ORF1ab/nsp14A2-B501M501IatGatT11AY.1040.001984
ORF1ab/nsp14A2-B501M501IatGatT11AY.1200.000037
ORF1ab/nsp14A2-B501M501IatGatT11AY.120.10.000321
ORF1ab/nsp14A2-B501M501IatGatT11AY.140.000088
ORF1ab/nsp14A2-B501M501IatGatT11AY.20.000356
ORF1ab/nsp14A2-B501M501IatGatT11AY.29.10.000221
ORF1ab/nsp14A2-B501M501IatGatT11AY.3.10.000085
ORF1ab/nsp14A2-B501M501IatGatT11AY.360.000148
ORF1ab/nsp14A2-B501M501IatGatT11AY.380.000499
ORF1ab/nsp14A2-B501M501IatGatT11AY.4.10.000737
ORF1ab/nsp14A2-B501M501IatGatT11AY.400.000964
ORF1ab/nsp14A2-B501M501IatGatT11AY.46.10.001027
ORF1ab/nsp14A2-B501M501IatGatT11AY.46.40.000165
ORF1ab/nsp14A2-B501M501IatGatT11AY.5.30.000337
ORF1ab/nsp14A2-B501M501IatGatT11AY.620.000436
ORF1ab/nsp14A2-B501M501IatGatT11AY.720.001361
ORF1ab/nsp14A2-B501M501IatGatT11AY.920.000287
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.2530.002506
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.2720.005208
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.3480.000796
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.3530.020833
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.40.002976
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.4090.002833
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.4480.002033
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1.500.000679
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1110.001175
ORF1ab/nsp14A2-B501M501IatGatT11B.1.177.260.006993
ORF1ab/nsp14A2-B501M501IatGatT11B.1.177.410.0025
ORF1ab/nsp14A2-B501M501IatGatT11B.1.177.860.000183
ORF1ab/nsp14A2-B501M501IatGatT11B.1.1920.009259
ORF1ab/nsp14A2-B501M501IatGatT11B.1.2100.002132
ORF1ab/nsp14A2-B501M501IatGatA11B.1.2350.002519
ORF1ab/nsp14A2-B501M501IatGatT11B.1.2410.000812
ORF1ab/nsp14A2-B501M501IatGatT11B.1.351.50.0006
ORF1ab/nsp14A2-B501M501IatGatT11B.1.36.160.001425
ORF1ab/nsp14A2-B501M501IatGatT11B.1.36.350.002604
ORF1ab/nsp14A2-B501M501IatGatT11B.1.3690.000285
ORF1ab/nsp14A2-B501M501IatGatT11B.1.3980.002976
ORF1ab/nsp14A2-B501M501IatGatC11B.1.4020.009804
ORF1ab/nsp14A2-B501M501IatGatT11B.1.4030.003268
ORF1ab/nsp14A2-B501M501IatGatT11B.1.4080.00369
ORF1ab/nsp14A2-B501M501IatGatT11B.1.4560.003268
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5240.001406
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5270.003704
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5380.008065
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5440.006024
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5600.00463
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5610.000397
ORF1ab/nsp14A2-B501M501IatGatT11B.1.5970.00463
ORF1ab/nsp14A2-B501M501IatGatT11B.1.6020.006536
ORF1ab/nsp14A2-B501M501IatGatA11B.1.6230.000536
ORF1ab/nsp14A2-B501M501IatGatT11B.1.80.001972
ORF1ab/nsp14A2-B501M501IatGatT11B.1.940.027027
ORF1ab/nsp14A2-B501M501IatGatT11B.270.015385
ORF1ab/nsp14A2-B501M501IatGatT11B.40.002208
ORF1ab/nsp14A2-B501M501IatGatT11B.400.000364
ORF1ab/nsp14A2-B501M501IatGatT11C.160.00106
ORF1ab/nsp14A2-B501M501IatGatT11C.360.000911
ORF1ab/nsp14A2-B501M501IatGatT11D.20.000075
ORF1ab/nsp14A2-B501M501IatGatA11P.1.140.000048
ORF1ab/nsp14A2-B501M501IatGatT11P.1.170.000162
ORF1ab/nsp14A2-B501M501IatGatT11W.30.005263