CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 495 | L495L | L6420L | syn | ctC | ctT | 87477 | 87170 | 0.99649 | 19522-19524 |
ORF1ab/nsp14A2-B | 495 | L495L | L6420L | syn | ctC | ctA | 87477 | 268 | 0.00306366 | 19522-19524 |
ORF1ab/nsp14A2-B | 495 | L495L | L6420L | syn | ctC | ctG | 87477 | 39 | 0.000445831 | 19522-19524 |
Details of the mutation L495L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 87170 | 87477 | All | 0.016672 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 268 | 87477 | All | 0.000051 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctG | 39 | 87477 | All | 0.000007 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 21177 | 21302 | B.1.1.7 | 0.018958 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 93 | 21302 | B.1.1.7 | 0.000083 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctG | 32 | 21302 | B.1.1.7 | 0.000029 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 16729 | 16730 | B.1.617.2 | 0.062992 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 16730 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 14632 | 14632 | AY.98.1 | 0.70864 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8723 | 8730 | AY.4 | 0.013577 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 7 | 8730 | AY.4 | 0.000011 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8217 | 8217 | AY.98 | 0.649103 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2650 | 2650 | AY.68 | 0.725431 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2011 | 2013 | B.1.351 | 0.05978 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 2 | 2013 | B.1.351 | 0.000059 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1874 | 1874 | B.1.221 | 0.133115 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 977 | 977 | B.6.6 | 0.868444 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 942 | 942 | B.1.565 | 0.763371 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 709 | 709 | B.1.177.8 | 0.533484 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 515 | 516 | B.1.2 | 0.004535 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 516 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 508 | 509 | AY.43 | 0.002251 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 509 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 374 | 378 | B.1.1 | 0.006785 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 4 | 378 | B.1.1 | 0.000073 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 288 | 290 | AY.25 | 0.001732 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 2 | 290 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 263 | 266 | AY.44 | 0.001601 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 3 | 266 | AY.44 | 0.000018 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 258 | 260 | P.1 | 0.004065 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctG | 2 | 260 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 246 | 252 | B.1 | 0.002253 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 3 | 252 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctG | 3 | 252 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 246 | 246 | AY.26 | 0.006964 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 241 | 241 | C.36.1 | 1 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 208 | 208 | Q.8 | 0.034301 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 194 | 194 | AY.4.5 | 0.020853 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 171 | 184 | AY.103 | 0.001062 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 13 | 184 | AY.103 | 0.000081 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 168 | 168 | AY.65 | 0.089552 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 168 | 168 | B.1.258.11 | 0.066587 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 149 | 150 | B.1.429 | 0.003506 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 150 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 130 | 144 | B.1.177 | 0.001712 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 14 | 144 | B.1.177 | 0.000184 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 129 | 129 | B.1.1.369 | 0.057564 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 122 | 122 | B.1.632 | 0.818792 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 105 | 105 | B.6 | 0.095541 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 104 | 104 | AY.36 | 0.015414 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 99 | 103 | AY.102 | 0.002625 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 4 | 103 | AY.102 | 0.000106 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 92 | 96 | AY.74 | 0.01064 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 96 | AY.74 | 0.000463 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 90 | 90 | B.1.160 | 0.002807 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 81 | 81 | B.1.243 | 0.005636 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 78 | 78 | B.1.596 | 0.006797 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 77 | 77 | B.1.526 | 0.00181 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 77 | 77 | B.1.637 | 0.005627 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 76 | 76 | Q.1 | 0.009601 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 75 | 75 | N.9 | 0.446429 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 74 | 74 | AY.120 | 0.002751 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 73 | 73 | AY.3 | 0.000726 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 72 | 72 | B.1.551 | 0.092903 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 72 | 72 | B.1.617.1 | 0.009286 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 71 | 71 | B.1.110.3 | 0.051006 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 67 | 68 | AY.6 | 0.002756 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 68 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 67 | 67 | R.1 | 0.006031 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 66 | 66 | B.1.177.7 | 0.01088 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 63 | 63 | AY.37 | 0.019912 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 63 | 63 | AY.4.2.1 | 0.009386 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 57 | 57 | AY.46.4 | 0.009377 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 56 | 56 | B.1.36.8 | 0.056 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 46 | 46 | AY.108 | 0.050717 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 46 | 46 | B.1.466.2 | 0.017997 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 45 | 45 | AY.5.3 | 0.015182 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 43 | 43 | AY.27 | 0.002783 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 41 | 41 | AY.29 | 0.000647 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 40 | 40 | B.1.351.5 | 0.023981 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 39 | 39 | AY.5 | 0.000805 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 38 | 39 | C.37 | 0.00441 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 39 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 37 | 37 | AY.14 | 0.003256 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 34 | 34 | AY.39.1 | 0.001347 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 34 | 34 | B.1.258 | 0.002263 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 33 | 33 | AY.4.2 | 0.000716 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 33 | 33 | B.1.1.25 | 0.018761 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 32 | 32 | AY.46 | 0.003331 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 31 | 31 | AY.20 | 0.001205 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 31 | 31 | AY.23 | 0.002162 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 31 | 31 | AY.39 | 0.000766 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 29 | 30 | AY.42 | 0.001167 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctG | 1 | 30 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 29 | 29 | B.1.1.1 | 0.009474 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 29 | 29 | B.1.621 | 0.002567 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 29 | 29 | C.36.3 | 0.016449 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 28 | 28 | AY.116 | 0.00803 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 28 | 28 | B.1.369 | 0.007986 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 27 | 27 | B.1.258.17 | 0.002807 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 26 | 26 | AY.60 | 0.02439 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 26 | 26 | B.1.525 | 0.002942 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 25 | 25 | AY.9 | 0.00169 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 25 | 25 | S.1 | 0.123762 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 23 | 24 | AY.100 | 0.001058 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctG | 1 | 24 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 24 | 24 | AY.106 | 0.008038 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 24 | 24 | AY.47 | 0.000747 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 24 | 24 | B.1.399 | 0.046422 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 23 | 24 | P.1.10 | 0.006198 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 24 | P.1.10 | 0.000269 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 24 | 24 | P.1.14 | 0.001147 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 23 | 23 | AY.117 | 0.001944 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 23 | 23 | B.1.1.519 | 0.000913 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 22 | 22 | B.6.4 | 1 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 21 | 21 | B.1.1.222 | 0.004284 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 21 | 21 | B.1.427 | 0.00106 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 18 | 19 | AY.3.1 | 0.001535 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 19 | AY.3.1 | 0.000085 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 19 | 19 | B.1.1.70 | 0.00648 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 19 | 19 | B.1.201 | 0.107955 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 19 | 19 | B.1.234 | 0.002507 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 17 | 19 | B.1.36.36 | 0.010235 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 19 | B.1.36.36 | 0.001204 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 17 | 18 | B.1.36 | 0.00248 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 18 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 17 | 17 | B.1.408 | 0.062731 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 17 | 17 | B.1.409 | 0.013281 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 17 | 17 | B.1.564 | 0.00724 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 16 | 16 | AY.5.4 | 0.004427 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 16 | 16 | B.1.575 | 0.004854 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 16 | 16 | P.2 | 0.002986 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 15 | 15 | AY.119 | 0.00053 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 15 | 15 | AY.99.2 | 0.001382 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 15 | 15 | B.1.1.189 | 0.022693 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 15 | 15 | B.1.1.28 | 0.004669 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 15 | 15 | B.1.367 | 0.011886 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 14 | 14 | AY.114 | 0.003235 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 14 | 14 | AY.45 | 0.001704 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 14 | 14 | AY.9.2 | 0.000514 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 14 | 14 | B.1.111 | 0.016451 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 14 | 14 | B.1.469 | 0.050542 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 13 | AY.113 | 0.001566 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 2 | 13 | AY.113 | 0.000285 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 13 | 13 | B.1.177.43 | 0.019202 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 12 | 12 | AY.111 | 0.002198 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 12 | 12 | B.1.1.204 | 0.036474 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 12 | 12 | B.1.1.269 | 0.016238 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 12 | 12 | B.1.1.63 | 0.00463 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | AY.116.1 | 0.003426 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | AY.121 | 0.001488 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | AY.29.1 | 0.002426 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | AY.75 | 0.000616 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | B.1.1.147 | 1 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | B.1.1.304 | 0.030899 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | B.1.1.406 | 0.071429 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | B.1.627 | 0.022222 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 11 | 11 | P.1.15 | 0.002556 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 10 | B.1.1.198 | 0.013216 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 1 | 10 | B.1.1.198 | 0.001468 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 10 | 10 | B.1.214.2 | 0.005995 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 10 | 10 | B.1.561 | 0.00397 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 10 | 10 | B.1.582 | 0.004907 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | AY.33 | 0.000601 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | AY.34 | 0.000873 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | AY.35 | 0.002097 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | AY.61 | 0.000943 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | B.1.1.214 | 0.000499 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | B.1.146 | 0.038136 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | B.1.177.56 | 0.006008 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | B.1.177.79 | 0.021077 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 9 | 9 | B.1.575.1 | 0.021951 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8 | 8 | AY.46.5 | 0.001587 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8 | 8 | AY.54 | 0.000763 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8 | 8 | AY.84 | 0.0035 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8 | 8 | B | 0.001022 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 8 | 8 | P.1.12 | 0.003872 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | A.1 | 0.001973 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | AY.16 | 0.002658 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | AY.32 | 0.003727 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | B.1.1.216 | 0.006233 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | B.1.1.277 | 0.005311 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | B.1.1.39 | 0.003568 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | B.1.177.4 | 0.001477 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | B.1.497 | 0.002203 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | B.1.588 | 0.006369 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 7 | 7 | Y.1 | 0.089744 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | AY.120.1 | 0.001926 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | AY.46.6 | 0.000433 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | AY.75.1 | 0.001082 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | AY.95 | 0.004566 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | B.1.177.72 | 0.020339 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | B.1.378 | 0.041096 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | B.1.438.1 | 0.000644 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | B.1.609 | 0.002876 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | C.16 | 0.006363 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 6 | 6 | Q.3 | 0.00087 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AD.2 | 0.001095 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.13 | 0.000805 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.46.2 | 0.003177 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.53 | 0.001438 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.59 | 0.002648 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.70 | 0.001043 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.73 | 0.003327 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | B.1.1.434 | 0.001743 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | B.1.36.29 | 0.002587 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | B.1.404 | 0.00651 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | B.1.517 | 0.002135 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | B.1.595 | 0.001305 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 5 | 5 | Q.4 | 0.002274 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | A.2.5 | 0.001996 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | A.23.1 | 0.002817 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | AY.105 | 0.002572 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | AY.109 | 0.002959 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | AY.16.1 | 0.00188 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | AY.69 | 0.000747 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | AY.78 | 0.006163 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.1.263 | 0.006231 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.1.33 | 0.001684 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.1.50 | 0.002716 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.177.62 | 0.004768 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.177.81 | 0.000757 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.315 | 0.024242 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.476 | 0.4 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | B.1.623 | 0.002146 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | C.34 | 0.148148 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | C.35 | 0.003096 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | P.1.2 | 0.004624 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 4 | 4 | P.1.7 | 0.001277 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | A | 0.001161 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | A.27 | 0.004967 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.56 | 0.004815 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.67 | 0.001393 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.82 | 0.004071 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.88 | 0.002653 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | AY.99.1 | 0.004658 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.1.220 | 0.005576 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.1.363 | 0.017964 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.1.389 | 0.018182 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.1.398 | 0.009677 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.177.16 | 0.001993 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.177.83 | 0.004444 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.232 | 0.001612 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.235 | 0.007557 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.351.2 | 0.000908 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.36.9 | 0.009646 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.39 | 0.011719 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.396 | 0.002117 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.470 | 0.004213 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.480 | 0.007463 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.576 | 0.00272 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.620 | 0.002838 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | B.1.621.1 | 0.001517 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 3 | 3 | P.1.1 | 0.000953 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | A.2.5.2 | 0.003145 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.79 | 0.002421 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AZ.1 | 0.001735 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.161 | 0.007067 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.171 | 0.007353 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.231 | 0.006192 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctA | 2 | 2 | B.1.1.241 | 0.004141 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.258 | 0.006515 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.265 | 0.006309 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.280 | 0.006173 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.380 | 0.019608 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.407 | 0.083333 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.464 | 0.002946 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.482 | 0.046512 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.1.521 | 0.010695 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.126 | 0.002551 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.139 | 0.001466 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.147 | 0.001512 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.33 | 0.003289 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.35 | 0.001382 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.42 | 0.001789 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.77 | 0.001452 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.236 | 0.004107 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.320 | 0.002491 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.351.3 | 0.001753 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.619.1 | 0.001283 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.1.9.3 | 0.076923 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.31 | 0.007463 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | C.8 | 0.008929 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | A.2.5.3 | 0.010309 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.80 | 0.001129 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.137 | 0.0125 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.163 | 0.007634 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.168 | 0.026316 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.234 | 0.012048 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.239 | 0.032258 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.273 | 0.006757 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.299 | 0.012195 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.419 | 0.007407 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.429 | 0.004608 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.430 | 0.041667 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.431 | 0.016129 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.433 | 0.001425 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.446 | 0.076923 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.462 | 0.008621 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.466 | 0.008696 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.517 | 0.006803 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.1.77 | 0.041667 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.160.22 | 0.006757 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.160.8 | 0.001289 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.165 | 0.011905 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.2 | 0.004545 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.40 | 0.005155 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.177.84 | 0.006667 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.180 | 0.05 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.203 | 0.0625 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.243.1 | 0.022222 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.38 | 0.032258 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.381 | 0.007812 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.40 | 0.019608 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.460 | 0.017857 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.500 | 0.052632 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.554 | 0.004405 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.579 | 0.011236 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.81 | 0.021277 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.3.1 | 0.001658 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.46 | 0.020833 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | B.6.8 | 0.008264 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | C.11 | 0.010638 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | C.26 | 0.007353 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | P.4 | 0.003802 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp14A2-B | 495 | L495L | ctC | ctT | 1 | 1 | W.4 | 0.001351 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|