CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 280 | L280L | L6205L | syn | Cta | Tta | 122085 | 121910 | 0.998567 | 18877-18879 |
ORF1ab/nsp14A2-B | 280 | L280L | L6205L | syn | ctA | ctG | 122085 | 118 | 0.00096654 | 18877-18879 |
ORF1ab/nsp14A2-B | 280 | L280L | L6205L | syn | ctA | ctT | 122085 | 50 | 0.000409551 | 18877-18879 |
ORF1ab/nsp14A2-B | 280 | L280L | L6205L | syn | CtA | TtG | 122085 | 4 | 0.0000327641 | 18877-18879 |
ORF1ab/nsp14A2-B | 280 | L280L | L6205L | syn | ctA | ctC | 122085 | 3 | 0.000024573 | 18877-18879 |
Details of the mutation L280L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 121910 | 122085 | All | 0.023317 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 118 | 122085 | All | 0.000023 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 50 | 122085 | All | 0.00001 |
ORF1ab/nsp14A2-B | 280 | L280L | CtA | TtG | 4 | 122085 | All | 0.000001 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctC | 3 | 122085 | All | 0.000001 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 30274 | 30274 | B.1.160 | 0.944174 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11076 | 11076 | R.1 | 0.99694 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11002 | 11004 | B.1.621 | 0.973887 |
ORF1ab/nsp14A2-B | 280 | L280L | CtA | TtG | 2 | 11004 | B.1.621 | 0.000177 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9323 | 9323 | B.1.438.1 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6734 | 6735 | B.1.36 | 0.982492 |
ORF1ab/nsp14A2-B | 280 | L280L | CtA | TtG | 1 | 6735 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5810 | 5815 | B.1 | 0.053217 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 3 | 5815 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 280 | L280L | CtA | TtG | 1 | 5815 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 5815 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2542 | 2542 | B.1.466.2 | 0.994523 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2359 | 2359 | B.1.36.18 | 0.991176 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2312 | 2324 | B.1.1.7 | 0.00207 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 11 | 2324 | B.1.1.7 | 0.00001 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 2324 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2015 | 2015 | B.1.36.17 | 0.995553 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1921 | 1921 | B.1.621.1 | 0.971674 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1866 | 1866 | B.1.36.29 | 0.965339 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1659 | 1659 | B.1.36.36 | 0.998796 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1309 | 1309 | B.1.36.27 | 0.999237 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1057 | 1057 | B.1.160.16 | 0.982342 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 996 | 996 | B.1.36.8 | 0.996 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 972 | 972 | B.1.436 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 854 | 854 | B.1.36.1 | 0.973774 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 832 | 832 | B.1.111 | 0.977673 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 818 | 818 | B.1.36.22 | 0.987923 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 789 | 789 | AU.1 | 0.998734 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 775 | 775 | B.1.160.8 | 0.998711 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 702 | 702 | B.1.36.16 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 697 | 697 | B.1.470 | 0.978933 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 602 | 602 | B.1.36.38 | 0.988506 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 586 | 586 | B.1.160.17 | 0.996599 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 569 | 569 | B.1.36.31 | 0.996497 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 514 | 523 | AY.4 | 0.0008 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 8 | 523 | AY.4 | 0.000012 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 523 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 506 | 510 | B.1.617.2 | 0.001905 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 4 | 510 | B.1.617.2 | 0.000015 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 481 | 481 | B.1.160.7 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 470 | 470 | AU.3 | 0.991561 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 445 | 464 | AY.43 | 0.001972 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 19 | 464 | AY.43 | 0.000084 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 463 | 463 | B.1.160.14 | 0.980932 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 463 | 463 | B.1.36.21 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 444 | 461 | B.1.1 | 0.008055 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 17 | 461 | B.1.1 | 0.000308 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 451 | 451 | B.1.36.25 | 0.995585 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 448 | 448 | B.1.36.39 | 0.993348 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 411 | 411 | B.1.160.26 | 0.995157 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 407 | 407 | AU.2 | 0.985472 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 405 | 405 | B.1.523 | 0.992647 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 400 | 400 | B.1.625 | 0.941176 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 381 | 381 | B.1.36.35 | 0.992188 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 362 | 362 | B.1.471 | 0.989071 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 360 | 360 | B.1.36.37 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 346 | 346 | B.1.36.26 | 0.988571 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 339 | 339 | B.1.160.28 | 0.991228 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 310 | 310 | B.1.36.9 | 0.996785 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 306 | 306 | B.1.456 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 265 | 265 | B.1.469 | 0.956679 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 262 | 262 | B.1.465 | 0.996198 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 249 | 249 | B.1.36.7 | 0.996 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 243 | 244 | AY.47 | 0.007559 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 244 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 241 | 241 | B.1.459 | 0.983673 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 236 | 236 | B.1.160.29 | 0.995781 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 226 | 226 | B.1.160.24 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 225 | 225 | B.1.160.33 | 0.995575 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 207 | 207 | B.1.160.23 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 202 | 202 | B.1.160.30 | 0.60119 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 201 | 201 | B.1.160.15 | 0.99505 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 198 | 200 | B.1.2 | 0.001743 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 200 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 200 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 199 | 199 | B.1.162 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 192 | 196 | AY.39 | 0.004745 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 2 | 196 | AY.39 | 0.000049 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 2 | 196 | AY.39 | 0.000049 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 191 | 191 | B.1.112 | 0.989637 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 186 | 186 | B.1.160.32 | 0.798283 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 182 | 182 | B.1.443 | 0.850467 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 174 | 174 | B.1.36.28 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 173 | 173 | B.1.468 | 0.988571 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 172 | 172 | B.1.160.11 | 0.982857 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 169 | 169 | B.1.439 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 166 | 166 | B.1.9.5 | 0.943182 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 163 | 163 | B.1.9.4 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 159 | 162 | B.1.177 | 0.002094 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 3 | 162 | B.1.177 | 0.00004 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 162 | 162 | B.1.36.24 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 162 | 162 | B.1.9 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 157 | 157 | AY.25 | 0.000944 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 156 | 156 | B.1.160.12 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 152 | 152 | B.1.438 | 0.993464 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 147 | 147 | B.1.160.22 | 0.993243 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 141 | 142 | AY.5 | 0.002912 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 142 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 140 | 140 | B.1.260 | 0.468227 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 137 | 137 | B.1.160.9 | 0.985612 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 137 | 137 | B.1.466.1 | 0.985612 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 136 | 136 | B.1.160.18 | 0.992701 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 134 | 134 | B.1.36.10 | 0.641148 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 132 | 132 | B.1.36.33 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 127 | 130 | AY.44 | 0.000773 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 2 | 130 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 130 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 127 | 127 | AY.103 | 0.000789 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 126 | 126 | B.1.124 | 0.984375 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 124 | 124 | B.1.463 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 123 | 123 | B.1.160.31 | 0.991935 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 122 | 122 | AB.1 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 121 | 121 | B.1.160.10 | 0.975806 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 121 | 121 | B.1.170 | 0.521552 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 109 | 109 | B.1.462 | 0.789855 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 106 | 108 | P.1 | 0.00167 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 108 | P.1 | 0.000016 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 108 | P.1 | 0.000016 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 106 | 106 | B.1.1.220 | 0.197026 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 106 | 106 | B.1.36.19 | 0.981481 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 104 | 104 | B.1.36.12 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 102 | 102 | B.1.441 | 0.980769 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 94 | 94 | AY.29 | 0.001483 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 94 | 94 | B.1.385 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 93 | 93 | B.1.351 | 0.002765 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 93 | 93 | B.1.36.2 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 90 | 90 | B.1.160.25 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 82 | 82 | B.1.160.20 | 0.732143 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 79 | 80 | B | 0.010097 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 80 | B | 0.000128 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 80 | 80 | B.1.533 | 0.769231 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 48 | 79 | B.1.243 | 0.00334 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 31 | 79 | B.1.243 | 0.002157 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 75 | 75 | B.1.1.214 | 0.004159 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 73 | 73 | B.1.1.526 | 0.258865 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 73 | 73 | B.1.221 | 0.005185 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 65 | 67 | AY.3 | 0.000647 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 67 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 67 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 67 | 67 | B.1.164 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 66 | 66 | B.1.160.27 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 65 | 65 | B.1.1.274 | 0.328283 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 63 | 64 | AY.26 | 0.001784 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 64 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 61 | 61 | B.1.36.23 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 43 | 60 | B.1.258 | 0.002862 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 17 | 60 | B.1.258 | 0.001131 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 58 | 58 | B.1.161 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 58 | 58 | B.1.36.20 | 0.983051 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 57 | 57 | B.1.526 | 0.00134 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 55 | 55 | B.1.460 | 0.982143 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 54 | 54 | B.1.562 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 53 | 53 | AY.102 | 0.001405 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 52 | 52 | B.1.438.2 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 50 | 50 | B.1.113 | 0.78125 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 49 | 49 | B.1.160.21 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 49 | 49 | B.1.177.16 | 0.032558 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 47 | 47 | B.1.177.81 | 0.008898 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 47 | 47 | B.1.247 | 0.701493 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 47 | 47 | B.1.36.34 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 47 | 47 | B.1.438.4 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 43 | 43 | B.1.466 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 41 | 41 | B.1.163 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 38 | 40 | AY.4.2 | 0.000824 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 2 | 40 | AY.4.2 | 0.000043 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 39 | 39 | B.1.1.39 | 0.019878 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 35 | 39 | B.1.429 | 0.000824 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 4 | 39 | B.1.429 | 0.000094 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 36 | 36 | AY.46 | 0.003747 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 36 | 36 | B.1.160.13 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 31 | 34 | AY.20 | 0.001205 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 3 | 34 | AY.20 | 0.000117 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 34 | 34 | B.1.1.525 | 0.185792 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 34 | 34 | B.1.234 | 0.004486 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 33 | 33 | B.1.177.44 | 0.017125 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 32 | 32 | B.1.245 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 31 | 31 | B.1.473 | 0.596154 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 31 | 31 | B.1.9.1 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 30 | 30 | AY.42 | 0.001207 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 28 | 28 | AY.63 | 0.010832 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 28 | 28 | B.1.160.19 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 28 | 28 | B.1.442 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 27 | 28 | B.1.596 | 0.002353 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 28 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 27 | 27 | AY.23 | 0.001883 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 25 | 26 | AY.120 | 0.000929 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 26 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 26 | 26 | B.1.177.73 | 0.014723 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 26 | 26 | B.1.623 | 0.013948 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 26 | 26 | B.1.9.3 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 25 | 25 | A | 0.009675 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 25 | 25 | B.1.1.445 | 0.925926 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 25 | 25 | B.1.177.21 | 0.001912 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 25 | 25 | B.1.467 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 23 | 23 | AY.3.1 | 0.001961 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 23 | 23 | B.1.258.11 | 0.009116 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 22 | 22 | B.1.561 | 0.008734 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 21 | 22 | Q.1 | 0.002653 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 22 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 20 | 20 | AY.100 | 0.00092 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 20 | 20 | B.1.369 | 0.005705 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 20 | 20 | B.1.425 | 0.05988 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 19 | 19 | AY.9 | 0.001284 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 18 | 18 | AY.13 | 0.002898 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 18 | 18 | B.1.1.317 | 0.00741 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 18 | 18 | B.1.1.519 | 0.000715 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | AY.119 | 0.0006 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | AY.33 | 0.001135 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | AY.4.5 | 0.001827 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | AY.61 | 0.001781 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | AY.98.1 | 0.000823 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | B.1.575 | 0.005158 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 17 | 17 | B.1.637 | 0.001242 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 16 | 16 | B.1.1.337 | 0.057554 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 16 | 16 | B.1.1.432 | 0.020253 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 16 | 16 | B.1.311 | 0.004393 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 15 | 16 | B.1.617.1 | 0.001934 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 16 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 15 | 15 | AY.34 | 0.001454 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 14 | 14 | AY.116 | 0.004015 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 14 | 14 | B.1.416 | 0.017766 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 14 | 14 | B.1.474 | 0.026616 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | AY.5.4 | 0.003597 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | AY.84 | 0.005687 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | B.1.1.10 | 0.014493 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | B.1.1.306 | 0.005699 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | B.1.177.43 | 0.019202 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | B.1.177.55 | 0.030303 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | B.1.438.3 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 13 | 13 | P.2 | 0.002426 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 12 | AY.111 | 0.001282 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 5 | 12 | AY.111 | 0.000916 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 12 | 12 | B.1.1.318 | 0.003621 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | AY.39.1 | 0.000436 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | AY.7.2 | 0.006152 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | AY.75 | 0.000616 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | B.1.177.57 | 0.003091 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | B.1.214 | 0.040293 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | B.1.427 | 0.000555 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 11 | 11 | B.6 | 0.010009 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 10 | 10 | AY.46.1 | 0.010267 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 10 | 10 | AY.75.1 | 0.001803 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 10 | 10 | B.1.609 | 0.004794 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 10 | 10 | B.1.9.2 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | AY.114 | 0.00208 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | AY.71 | 0.004276 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | B.1.1.37 | 0.001736 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | B.1.1.464 | 0.013255 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | B.1.157 | 0.026866 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | B.1.177.7 | 0.001484 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | B.1.367 | 0.007132 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | B.1.458 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 9 | 9 | C.37 | 0.001045 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 8 | 0.166667 | |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 3 | 8 | 0.166667 | |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctC | 2 | 8 | 0.111111 | |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 8 | 8 | B.1.184 | 0.470588 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 8 | 8 | B.1.397 | 0.038835 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 8 | 8 | B.1.400 | 0.003432 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | AY.37 | 0.002212 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | AY.41 | 0.002058 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 7 | 7 | B.1.1.427 | 1 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | B.1.128 | 0.004447 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | B.1.240 | 0.001509 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | B.1.241 | 0.005682 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 7 | 7 | P.1.15 | 0.001626 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 6 | AY.117 | 0.000423 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 6 | AY.117 | 0.000085 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | AY.121 | 0.000812 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | AY.6 | 0.000247 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | B.1.1.70 | 0.002046 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | B.1.177.60 | 0.001311 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | B.1.177.86 | 0.001101 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | B.1.509 | 0.005195 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 6 | 6 | B.1.575.1 | 0.014634 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | AY.106 | 0.001674 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | AY.36 | 0.000741 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | AY.53 | 0.001438 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | AZ.2 | 0.004105 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 5 | B.1.1.409 | 0.011331 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 5 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | B.1.158 | 0.119048 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | B.1.177.31 | 0.057471 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | B.1.409 | 0.003906 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 5 | C.36.3 | 0.002269 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctC | 1 | 5 | C.36.3 | 0.000567 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 5 | 5 | P.1.12 | 0.00242 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | AY.105 | 0.002572 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | AY.65 | 0.002132 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | AY.95 | 0.003044 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.1.161 | 0.014134 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.1.216 | 0.003562 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.1.372 | 0.002755 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.165 | 0.047619 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.177.75 | 0.004162 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 4 | B.1.236 | 0.00616 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 4 | B.1.236 | 0.002053 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.396 | 0.002823 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.1.628 | 0.001409 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | B.40 | 0.001457 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | C.14 | 0.017316 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | C.17 | 0.222222 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 4 | 4 | C.36 | 0.003643 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 4 | Q.8 | 0.000495 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 4 | Q.8 | 0.000165 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.4.4 | 0.001227 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.55 | 0.002752 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.64 | 0.001786 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | AY.99 | 0.003148 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.207 | 0.003546 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.236 | 0.02069 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.267 | 0.030303 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.291 | 0.002227 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.326 | 0.005282 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.50 | 0.002037 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.51 | 0.005155 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.1.521 | 0.016043 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.118 | 0.020134 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.177.12 | 0.000455 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.177.77 | 0.002179 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.210 | 0.006397 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.222 | 0.005076 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.336 | 0.007317 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.497 | 0.000944 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.580 | 0.012195 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.4.1 | 0.056604 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | B.55 | 0.00885 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | C.18 | 0.007772 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | A.2.2 | 0.003378 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | A.3 | 0.004193 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.4.3 | 0.001684 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.46.3 | 0.001867 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.69 | 0.000373 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.198 | 0.002937 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.263 | 0.003115 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.305 | 0.007722 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.377 | 0.002762 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.428 | 0.018868 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.44 | 0.004819 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.507 | 0.017391 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.1.83 | 0.00542 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.177.65 | 0.001331 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.199 | 0.008264 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.324 | 0.00321 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.333 | 0.021053 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.415.1 | 0.015152 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.416.1 | 0.003125 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.453 | 0.006472 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.480 | 0.004975 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.524 | 0.002813 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | B.4 | 0.004415 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 2 | 2 | P.6 | 0.006289 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | A.23 | 0.010526 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AF.1 | 0.037037 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.12 | 0.007463 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.171 | 0.003676 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.196 | 0.005714 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.221 | 0.010101 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.228 | 0.003049 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.359 | 0.027778 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.363 | 0.005988 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.370 | 0.012658 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.417 | 0.002703 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.512 | 0.028571 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.61 | 0.008772 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.8 | 0.003584 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.48 | 0.003125 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.177.84 | 0.006667 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.194 | 0.04 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctG | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.268 | 0.010417 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.432 | 0.011236 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.446 | 0.02 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.513 | 0.013889 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.542 | 0.03125 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.618 | 0.004032 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.1.638 | 0.052632 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp14A2-B | 280 | L280L | ctA | ctT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | L.3 | 0.003546 |
ORF1ab/nsp14A2-B | 280 | L280L | Cta | Tta | 1 | 1 | P.1.7 | 0.000319 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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