CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 259 | L259L | L6184L | syn | Ctg | Ttg | 11490 | 4797 | 0.417493 | 18814-18816 |
ORF1ab/nsp14A2-B | 259 | L259L | L6184L | syn | ctG | ctT | 11490 | 4247 | 0.369626 | 18814-18816 |
ORF1ab/nsp14A2-B | 259 | L259L | L6184L | syn | ctG | ctA | 11490 | 2128 | 0.185205 | 18814-18816 |
ORF1ab/nsp14A2-B | 259 | L259L | L6184L | syn | ctG | ctC | 11490 | 318 | 0.0276762 | 18814-18816 |
Details of the mutation L259L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4797 | 11490 | All | 0.000917 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4247 | 11490 | All | 0.000812 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2128 | 11490 | All | 0.000407 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 318 | 11490 | All | 0.000061 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 741 | 1534 | B.1.617.2 | 0.00279 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 395 | 1534 | B.1.617.2 | 0.001487 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 379 | 1534 | B.1.617.2 | 0.001427 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 19 | 1534 | B.1.617.2 | 0.000072 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 759 | 1523 | B.1.1.7 | 0.000679 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 576 | 1523 | B.1.1.7 | 0.000516 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 109 | 1523 | B.1.1.7 | 0.000098 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 79 | 1523 | B.1.1.7 | 0.000071 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 632 | 1252 | AY.4 | 0.000984 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 399 | 1252 | AY.4 | 0.000621 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 220 | 1252 | AY.4 | 0.000342 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 1252 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 339 | 651 | AY.43 | 0.001502 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 252 | 651 | AY.43 | 0.001116 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 36 | 651 | AY.43 | 0.000159 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 24 | 651 | AY.43 | 0.000106 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 345 | 479 | B.1.2 | 0.003038 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 120 | 479 | B.1.2 | 0.001057 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 14 | 479 | B.1.2 | 0.000123 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 324 | 325 | AY.48 | 0.150698 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 325 | AY.48 | 0.000465 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 179 | 310 | AY.44 | 0.00109 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 117 | 310 | AY.44 | 0.000712 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 14 | 310 | AY.44 | 0.000085 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 295 | 296 | B.1.466.2 | 0.115415 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 296 | B.1.466.2 | 0.000391 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 199 | 293 | AY.103 | 0.001236 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 82 | 293 | AY.103 | 0.000509 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 9 | 293 | AY.103 | 0.000056 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 3 | 293 | AY.103 | 0.000019 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 264 | 285 | B.1.1.519 | 0.010484 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 21 | 285 | B.1.1.519 | 0.000834 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 241 | 248 | AY.47 | 0.007496 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 248 | AY.47 | 0.000124 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 3 | 248 | AY.47 | 0.000093 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 199 | 204 | AY.4.4 | 0.081424 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 204 | AY.4.4 | 0.002046 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 165 | 197 | P.1 | 0.002599 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 22 | 197 | P.1 | 0.000347 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 9 | 197 | P.1 | 0.000142 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 197 | P.1 | 0.000016 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 173 | 178 | B.1.221 | 0.012289 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 178 | B.1.221 | 0.000284 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 178 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 156 | 166 | AY.4.2 | 0.003383 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 9 | 166 | AY.4.2 | 0.000195 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 166 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 84 | 165 | AY.25 | 0.000505 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 76 | 165 | AY.25 | 0.000457 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 4 | 165 | AY.25 | 0.000024 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 165 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 134 | 142 | AY.6 | 0.005511 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 142 | AY.6 | 0.000206 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 142 | AY.6 | 0.000123 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 77 | 142 | B.1 | 0.000705 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 61 | 142 | B.1 | 0.000559 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 142 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 2 | 142 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 136 | 142 | B.1.258 | 0.00905 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 142 | B.1.258 | 0.000266 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 2 | 142 | B.1.258 | 0.000133 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 140 | 140 | B.1.279 | 0.071905 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 64 | 124 | B.1.177 | 0.000843 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 52 | 124 | B.1.177 | 0.000685 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 8 | 124 | B.1.177 | 0.000105 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 78 | 106 | AY.102 | 0.002068 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 21 | 106 | AY.102 | 0.000557 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 4 | 106 | AY.102 | 0.000106 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 3 | 106 | AY.102 | 0.00008 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 94 | 104 | AY.3 | 0.000935 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 9 | 104 | AY.3 | 0.00009 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 104 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 75 | 80 | B.1.351.2 | 0.022693 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 5 | 80 | B.1.351.2 | 0.001513 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 71 | 73 | D.2 | 0.005328 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 73 | D.2 | 0.00015 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 71 | 72 | AY.13 | 0.011429 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 72 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 56 | 71 | AY.33 | 0.00374 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 9 | 71 | AY.33 | 0.000601 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 71 | AY.33 | 0.000334 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 71 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 26 | 70 | B.1.1 | 0.000472 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 23 | 70 | B.1.1 | 0.000417 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 17 | 70 | B.1.1 | 0.000308 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 4 | 70 | B.1.1 | 0.000073 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 37 | 66 | AY.39 | 0.000914 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 15 | 66 | AY.39 | 0.000371 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 13 | 66 | AY.39 | 0.000321 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 66 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 30 | 66 | B.1.351 | 0.000892 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 21 | 66 | B.1.351 | 0.000624 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 15 | 66 | B.1.351 | 0.000446 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 43 | 64 | AY.20 | 0.001671 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 16 | 64 | AY.20 | 0.000622 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 5 | 64 | AY.20 | 0.000194 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 57 | 62 | AY.9.2 | 0.002094 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 62 | AY.9.2 | 0.000147 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 62 | AY.9.2 | 0.000037 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 61 | 62 | B.1.177.79 | 0.142857 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 62 | B.1.177.79 | 0.002342 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 52 | 62 | B.1.243 | 0.003618 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 10 | 62 | B.1.243 | 0.000696 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 35 | 57 | AY.100 | 0.00161 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 18 | 57 | AY.100 | 0.000828 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 2 | 57 | AY.100 | 0.000092 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 57 | AY.100 | 0.000092 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 42 | 56 | B.1.177.60 | 0.009174 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 12 | 56 | B.1.177.60 | 0.002621 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 56 | B.1.177.60 | 0.000437 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 34 | 50 | AY.74 | 0.003932 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 16 | 50 | AY.74 | 0.00185 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 44 | 50 | B.1.160 | 0.001372 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 50 | B.1.160 | 0.000187 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 28 | 40 | AY.46 | 0.002914 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 40 | AY.46 | 0.00052 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 4 | 40 | AY.46 | 0.000416 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 3 | 40 | AY.46 | 0.000312 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 33 | 39 | AY.5 | 0.000681 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 39 | AY.5 | 0.000083 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 39 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 39 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 38 | 39 | B.1.234 | 0.005014 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 39 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 29 | 37 | B.1.429 | 0.000682 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 7 | 37 | B.1.429 | 0.000165 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 37 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 36 | 36 | B.1.177.6 | 0.035156 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 30 | 31 | AY.54 | 0.00286 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 31 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 22 | 30 | AY.26 | 0.000623 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 8 | 30 | AY.26 | 0.000226 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 28 | 30 | C.36 | 0.025501 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 30 | C.36 | 0.001821 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 20 | 28 | AY.119 | 0.000706 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 28 | AY.119 | 0.000141 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 4 | 28 | AY.119 | 0.000141 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 25 | 27 | Q.1 | 0.003158 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 27 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 27 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 14 | 26 | AY.4.2.1 | 0.002086 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 12 | 26 | AY.4.2.1 | 0.001788 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 17 | 24 | AY.98.1 | 0.000823 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 7 | 24 | AY.98.1 | 0.000339 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 24 | 24 | B.1.177.86 | 0.004403 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 23 | 24 | P.1.15 | 0.005344 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 24 | P.1.15 | 0.000232 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 16 | 23 | AY.61 | 0.001676 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 23 | AY.61 | 0.000419 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 3 | 23 | AY.61 | 0.000314 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 15 | 22 | B.1.526 | 0.000353 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 22 | B.1.526 | 0.000165 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 11 | 21 | B.1.36 | 0.001605 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 10 | 21 | B.1.36 | 0.001459 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 9 | 19 | AY.29 | 0.000142 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 9 | 19 | AY.29 | 0.000142 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 19 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 19 | 19 | B.1.160.30 | 0.056548 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 10 | 18 | B.1.1.284 | 0.001074 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 8 | 18 | B.1.1.284 | 0.000859 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 18 | 18 | B.1.177.62 | 0.021454 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 18 | 18 | B.1.231 | 0.580645 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 14 | 18 | C.37 | 0.001625 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 18 | C.37 | 0.000464 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 17 | 17 | B.1.362 | 0.026194 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 11 | 17 | P.2 | 0.002053 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 6 | 17 | P.2 | 0.00112 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 12 | 16 | AY.46.6 | 0.000866 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 16 | AY.46.6 | 0.000217 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 16 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 11 | 16 | AY.9.1 | 0.000921 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 16 | AY.9.1 | 0.000419 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 11 | 15 | AY.75.1 | 0.001983 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 15 | AY.75.1 | 0.000721 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 15 | 15 | B.1.1.432 | 0.018987 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 13 | 14 | AY.101 | 0.006376 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 14 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 14 | 14 | AY.70 | 0.002919 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 8 | 13 | AY.111 | 0.001465 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 13 | AY.111 | 0.000549 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 13 | AY.111 | 0.000366 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 13 | 13 | B.1.1.277 | 0.009863 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 13 | B.1.1.28 | 0.002179 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 13 | B.1.1.28 | 0.001867 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 13 | 13 | B.1.1.63 | 0.005015 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 11 | 13 | P.1.14 | 0.000526 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 13 | P.1.14 | 0.000048 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 13 | P.1.14 | 0.000048 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 12 | A.2.5 | 0.003493 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 12 | A.2.5 | 0.001497 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 12 | A.2.5 | 0.000998 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 12 | 12 | AY.30 | 0.004749 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 6 | 12 | AY.39.1 | 0.000238 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 12 | AY.39.1 | 0.000198 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 12 | AY.39.1 | 0.00004 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 11 | 12 | AY.45 | 0.001339 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 12 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 7 | 11 | AY.42 | 0.000282 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 11 | AY.42 | 0.000121 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 11 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 11 | 11 | B.1.416.1 | 0.017188 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 11 | B.1.427 | 0.000353 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 11 | B.1.427 | 0.000202 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 6 | 11 | B.1.621 | 0.000531 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 11 | B.1.621 | 0.000266 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 11 | B.1.621 | 0.000089 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 11 | B.1.621 | 0.000089 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 8 | 10 | AY.116 | 0.002294 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 10 | AY.116 | 0.000574 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 5 | 10 | AY.117 | 0.000423 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 10 | AY.117 | 0.000254 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 10 | AY.117 | 0.000169 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 9 | 10 | AY.120 | 0.000335 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 10 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 10 | AY.37 | 0.00158 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 10 | AY.37 | 0.00158 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 5 | 10 | AY.84 | 0.002187 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 10 | AY.84 | 0.001312 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 10 | AY.84 | 0.000875 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 10 | 10 | B.1.617.1 | 0.00129 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 6 | 9 | AY.108 | 0.006615 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 3 | 9 | AY.108 | 0.003308 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 9 | AY.98 | 0.000395 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 9 | AY.98 | 0.000316 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 9 | B.1.1.214 | 0.000333 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 9 | B.1.1.214 | 0.000111 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 9 | B.1.1.214 | 0.000055 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 9 | 9 | B.1.210 | 0.01919 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 8 | 9 | B.1.619.1 | 0.005131 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 9 | B.1.619.1 | 0.000641 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 8 | AY.34 | 0.000582 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 8 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 8 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 8 | AY.5.3 | 0.002362 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 8 | AY.5.3 | 0.000337 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 8 | AY.83 | 0.010345 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 8 | AY.83 | 0.003448 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 8 | B | 0.000511 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 8 | B | 0.000383 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 8 | B | 0.000128 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 8 | B.1.1.222 | 0.00102 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 8 | B.1.1.222 | 0.000612 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 7 | AY.75 | 0.000224 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 7 | AY.75 | 0.000112 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 7 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 7 | 7 | B.1.177.4 | 0.001477 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 7 | B.1.241 | 0.00487 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 7 | B.1.241 | 0.000812 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 7 | B.1.252 | 0.046358 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 7 | 7 | P.1.17 | 0.001132 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 7 | P.1.7 | 0.001596 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 7 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 7 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 6 | AY.118 | 0.000313 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 6 | AY.118 | 0.000063 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 6 | AY.55 | 0.002752 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 6 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 6 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 6 | 6 | AY.89 | 0.029412 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 6 | B.1.1.50 | 0.002716 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 6 | B.1.1.50 | 0.001358 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 6 | B.1.240 | 0.000862 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 6 | B.1.240 | 0.000216 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 6 | B.1.240 | 0.000216 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 6 | 6 | B.1.36.38 | 0.009852 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 6 | B.1.369 | 0.001426 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 6 | B.1.369 | 0.000285 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 6 | 6 | B.1.525 | 0.000679 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 3 | 6 | B.1.577 | 0.002062 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 6 | B.1.577 | 0.001375 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 6 | B.1.577 | 0.000687 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 6 | B.1.596 | 0.000349 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 6 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 6 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 6 | B.1.637 | 0.000365 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 6 | B.1.637 | 0.000073 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 5 | AY.12 | 0.000948 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 5 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 5 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 5 | AY.14 | 0.000176 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 5 | AY.14 | 0.000176 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 5 | AY.14 | 0.000088 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 5 | AY.23 | 0.000209 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 5 | AY.23 | 0.00007 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 5 | AY.23 | 0.00007 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 5 | AY.28 | 0.009452 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 4 | 5 | AY.85 | 0.001709 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 5 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 5 | AY.92 | 0.000862 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 5 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 5 | B.1.1.434 | 0.001394 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 5 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 5 | 5 | B.1.177.7 | 0.000824 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 5 | B.1.298 | 0.010571 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 5 | B.1.311 | 0.000824 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 5 | B.1.311 | 0.000549 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 5 | 5 | B.1.574 | 0.010753 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 5 | R.1 | 0.00036 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 5 | R.1 | 0.00009 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 4 | A.21 | 0.01108 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 4 | AD.2 | 0.000876 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 4 | AY.16.1 | 0.00141 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 4 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 3 | 4 | AY.46.4 | 0.000494 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 4 | AY.46.4 | 0.000165 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 4 | AY.87 | 0.002498 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 4 | AY.87 | 0.000833 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 4 | B.1.1.10 | 0.003344 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 4 | B.1.1.10 | 0.001115 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 4 | 4 | B.1.1.13 | 0.142857 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 4 | B.1.1.170 | 0.003741 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 4 | B.1.1.170 | 0.001247 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 4 | 4 | B.1.1.216 | 0.003562 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 4 | 4 | B.1.469 | 0.01444 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 3 | 4 | B.1.524 | 0.004219 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 4 | B.1.524 | 0.001406 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 4 | Q.3 | 0.000435 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 4 | Q.3 | 0.000145 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 4 | Q.8 | 0.000495 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 4 | Q.8 | 0.000165 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 3 | A | 0.001161 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 3 | A.23.1 | 0.001408 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 3 | A.23.1 | 0.000704 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | AE.3 | 0.096774 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 3 | AY.32 | 0.001065 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 3 | AY.32 | 0.000532 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 3 | AY.46.5 | 0.000595 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 3 | AY.5.4 | 0.000553 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 3 | AY.5.4 | 0.000277 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | AY.78 | 0.004622 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | B.1.1.47 | 0.016043 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 3 | B.1.1.5 | 0.025 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | B.1.1.521 | 0.016043 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 3 | B.1.177.81 | 0.000379 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 3 | B.1.177.81 | 0.000189 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | B.1.232 | 0.001612 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 3 | B.1.329 | 0.001215 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 3 | B.1.329 | 0.000608 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 3 | B.1.36.29 | 0.001035 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 3 | B.1.36.29 | 0.000517 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 3 | B.1.438.1 | 0.000215 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 3 | B.1.438.1 | 0.000107 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 3 | 3 | B.1.439 | 0.017751 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 3 | 3 | B.1.590 | 0.013636 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 3 | B.1.595 | 0.000522 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 3 | B.1.595 | 0.000261 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 2 | 3 | B.1.628 | 0.000705 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 3 | B.1.628 | 0.000352 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 3 | P.1.10 | 0.000539 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 3 | P.1.10 | 0.000269 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | AY.120.2 | 0.002571 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 2 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | AY.21 | 0.003795 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | AY.27 | 0.000065 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | AY.27 | 0.000065 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 2 | AY.68 | 0.000274 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | AY.68 | 0.000274 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | AY.69 | 0.000187 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 2 | AY.69 | 0.000187 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 2 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.1.243 | 0.008163 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | B.1.1.265 | 0.003155 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 2 | B.1.1.265 | 0.003155 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | B.1.1.362 | 0.011236 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | B.1.1.371 | 0.020833 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.1.464 | 0.002946 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.1.53 | 0.027397 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.147 | 0.001512 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.177.17 | 0.001642 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.177.82 | 0.000955 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.398 | 0.005952 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.505 | 0.008772 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.521 | 0.00995 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | B.1.548 | 0.071429 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | B.1.609 | 0.000479 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | B.1.609 | 0.000479 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 2 | 2 | N.4 | 0.008511 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 2 | P.1.12 | 0.000484 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 2 | P.1.12 | 0.000484 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 2 | 2 | P.1.8 | 0.009569 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AD.2.1 | 0.045455 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | AZ.1 | 0.000867 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.134 | 0.011364 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.255 | 0.00303 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.309 | 0.005848 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.1.45 | 0.014085 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.1.61 | 0.008772 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.12 | 0.008 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.160.8 | 0.001289 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.177.3 | 0.007634 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.219 | 0.009434 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.258.24 | 0.010753 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.380 | 0.006623 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctA | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.422 | 0.000812 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.566 | 0.019231 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.613 | 0.027027 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | B.34 | 0.013699 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctC | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp14A2-B | 259 | L259L | Ctg | Ttg | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | C.38 | 0.008065 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | U.1 | 0.012821 |
ORF1ab/nsp14A2-B | 259 | L259L | ctG | ctT | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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