CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = L177I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B177L177IL6102InonsynCtcAtc90840.93333318568-18570
ORF1ab/nsp14A2-B177L177IL6102InonsynCtCAtA9040.044444418568-18570
ORF1ab/nsp14A2-B177L177IL6102InonsynCtCAtT9020.022222218568-18570

Details of the mutation L177I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B177L177ICtcAtc8490All0.000016
ORF1ab/nsp14A2-B177L177ICtCAtA490All0.000001
ORF1ab/nsp14A2-B177L177ICtCAtT290All0
ORF1ab/nsp14A2-B177L177ICtcAtc2121B.1.617.20.000079
ORF1ab/nsp14A2-B177L177ICtcAtc1414B.1.1.70.000013
ORF1ab/nsp14A2-B177L177ICtcAtc88B.1.177.730.00453
ORF1ab/nsp14A2-B177L177ICtcAtc67B.10.000055
ORF1ab/nsp14A2-B177L177ICtCAtA17B.10.000009
ORF1ab/nsp14A2-B177L177ICtcAtc240.111111
ORF1ab/nsp14A2-B177L177ICtCAtT240.111111
ORF1ab/nsp14A2-B177L177ICtcAtc44B.1.177.750.004162
ORF1ab/nsp14A2-B177L177ICtcAtc44B.1.5260.000094
ORF1ab/nsp14A2-B177L177ICtcAtc33B.1.177.440.001557
ORF1ab/nsp14A2-B177L177ICtcAtc12A0.000387
ORF1ab/nsp14A2-B177L177ICtCAtA12A0.000387
ORF1ab/nsp14A2-B177L177ICtcAtc22AY.290.000032
ORF1ab/nsp14A2-B177L177ICtcAtc22AY.30.00002
ORF1ab/nsp14A2-B177L177ICtcAtc12AY.430.000004
ORF1ab/nsp14A2-B177L177ICtCAtA12AY.430.000004
ORF1ab/nsp14A2-B177L177ICtcAtc12B0.000128
ORF1ab/nsp14A2-B177L177ICtCAtA12B0.000128
ORF1ab/nsp14A2-B177L177ICtcAtc22B.1.10.000036
ORF1ab/nsp14A2-B177L177ICtcAtc22B.1.20.000018
ORF1ab/nsp14A2-B177L177ICtcAtc11AY.1190.000035
ORF1ab/nsp14A2-B177L177ICtcAtc11AY.120.20.001285
ORF1ab/nsp14A2-B177L177ICtcAtc11AY.40.000002
ORF1ab/nsp14A2-B177L177ICtcAtc11AY.470.000031
ORF1ab/nsp14A2-B177L177ICtcAtc11AY.520.000814
ORF1ab/nsp14A2-B177L177ICtcAtc11B.1.1.2220.000204
ORF1ab/nsp14A2-B177L177ICtcAtc11B.1.1130.015625
ORF1ab/nsp14A2-B177L177ICtcAtc11B.1.3510.00003
ORF1ab/nsp14A2-B177L177ICtcAtc11B.1.6280.000352
ORF1ab/nsp14A2-B177L177ICtcAtc11N.50.001767
ORF1ab/nsp14A2-B177L177ICtcAtc11P.1.140.000048