CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = L109L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B109L109LL6034LsynctActG363033200.91460118364-18366
ORF1ab/nsp14A2-B109L109LL6034LsynCtaTta36302900.079889818364-18366
ORF1ab/nsp14A2-B109L109LL6034LsynctActT3630180.0049586818364-18366
ORF1ab/nsp14A2-B109L109LL6034LsynctActC363020.00055096418364-18366

Details of the mutation L109L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B109L109LctActG33203630All0.000635
ORF1ab/nsp14A2-B109L109LCtaTta2903630All0.000055
ORF1ab/nsp14A2-B109L109LctActT183630All0.000003
ORF1ab/nsp14A2-B109L109LctActC23630All0
ORF1ab/nsp14A2-B109L109LctActG642648AY.40.000999
ORF1ab/nsp14A2-B109L109LCtaTta6648AY.40.000009
ORF1ab/nsp14A2-B109L109LctActG558616B.1.1.70.0005
ORF1ab/nsp14A2-B109L109LCtaTta55616B.1.1.70.000049
ORF1ab/nsp14A2-B109L109LctActT3616B.1.1.70.000003
ORF1ab/nsp14A2-B109L109LctActG600600A.270.993377
ORF1ab/nsp14A2-B109L109LctActG330330B.1.1.40.982143
ORF1ab/nsp14A2-B109L109LCtaTta114144AY.250.000686
ORF1ab/nsp14A2-B109L109LctActG30144AY.250.00018
ORF1ab/nsp14A2-B109L109LctActG103110B.1.617.20.000388
ORF1ab/nsp14A2-B109L109LCtaTta6110B.1.617.20.000023
ORF1ab/nsp14A2-B109L109LctActC1110B.1.617.20.000004
ORF1ab/nsp14A2-B109L109LctActG9094B.10.000824
ORF1ab/nsp14A2-B109L109LCtaTta494B.10.000037
ORF1ab/nsp14A2-B109L109LctActG7879AY.200.003031
ORF1ab/nsp14A2-B109L109LCtaTta179AY.200.000039
ORF1ab/nsp14A2-B109L109LctActG6878AY.430.000301
ORF1ab/nsp14A2-B109L109LCtaTta978AY.430.00004
ORF1ab/nsp14A2-B109L109LctActC178AY.430.000004
ORF1ab/nsp14A2-B109L109LctActG6666AY.1000.003036
ORF1ab/nsp14A2-B109L109LctActG3653B.1.20.000317
ORF1ab/nsp14A2-B109L109LCtaTta1753B.1.20.00015
ORF1ab/nsp14A2-B109L109LctActG5253B.1.4290.001224
ORF1ab/nsp14A2-B109L109LCtaTta153B.1.4290.000024
ORF1ab/nsp14A2-B109L109LctActG3939P.1.160.01459
ORF1ab/nsp14A2-B109L109LctActG2228AY.390.000544
ORF1ab/nsp14A2-B109L109LCtaTta628AY.390.000148
ORF1ab/nsp14A2-B109L109LctActG1426AY.1030.000087
ORF1ab/nsp14A2-B109L109LCtaTta1226AY.1030.000075
ORF1ab/nsp14A2-B109L109LctActG2224AY.30.000219
ORF1ab/nsp14A2-B109L109LCtaTta224AY.30.00002
ORF1ab/nsp14A2-B109L109LctActG2224AY.440.000134
ORF1ab/nsp14A2-B109L109LCtaTta224AY.440.000012
ORF1ab/nsp14A2-B109L109LctActG2324P.10.000362
ORF1ab/nsp14A2-B109L109LCtaTta124P.10.000016
ORF1ab/nsp14A2-B109L109LctActG2323B.1.6200.02176
ORF1ab/nsp14A2-B109L109LctActG2121AY.46.60.001516
ORF1ab/nsp14A2-B109L109LctActG1920AY.470.000591
ORF1ab/nsp14A2-B109L109LCtaTta120AY.470.000031
ORF1ab/nsp14A2-B109L109LctActG1220AY.60.000494
ORF1ab/nsp14A2-B109L109LCtaTta820AY.60.000329
ORF1ab/nsp14A2-B109L109LctActG1519AY.1190.00053
ORF1ab/nsp14A2-B109L109LCtaTta419AY.1190.000141
ORF1ab/nsp14A2-B109L109LctActG1717AY.260.000481
ORF1ab/nsp14A2-B109L109LctActG1616AY.1020.000424
ORF1ab/nsp14A2-B109L109LctActG1616AY.46.40.002632
ORF1ab/nsp14A2-B109L109LctActG1515AY.50.00031
ORF1ab/nsp14A2-B109L109LctActG1315B.1.10.000236
ORF1ab/nsp14A2-B109L109LctActT215B.1.10.000036
ORF1ab/nsp14A2-B109L109LctActG814AY.290.000126
ORF1ab/nsp14A2-B109L109LCtaTta514AY.290.000079
ORF1ab/nsp14A2-B109L109LctActT114AY.290.000016
ORF1ab/nsp14A2-B109L109LctActG1313B.1.4800.032338
ORF1ab/nsp14A2-B109L109LctActG1212B.1.1.5190.000477
ORF1ab/nsp14A2-B109L109LctActG1112B.1.3510.000327
ORF1ab/nsp14A2-B109L109LCtaTta112B.1.3510.00003
ORF1ab/nsp14A2-B109L109LctActG79AY.450.000852
ORF1ab/nsp14A2-B109L109LCtaTta29AY.450.000243
ORF1ab/nsp14A2-B109L109LctActG99AY.99.10.013975
ORF1ab/nsp14A2-B109L109LctActG99B0.00115
ORF1ab/nsp14A2-B109L109LCtaTta99B.1.36.290.004656
ORF1ab/nsp14A2-B109L109LctActG99P.1.40.008789
ORF1ab/nsp14A2-B109L109LctActG68AY.750.000336
ORF1ab/nsp14A2-B109L109LCtaTta28AY.750.000112
ORF1ab/nsp14A2-B109L109LctActG88AY.99.20.000737
ORF1ab/nsp14A2-B109L109LctActT88B.1.1.3280.135593
ORF1ab/nsp14A2-B109L109LctActG88B.1.1770.000105
ORF1ab/nsp14A2-B109L109LctActG88B.1.6090.003835
ORF1ab/nsp14A2-B109L109LctActG77A0.002709
ORF1ab/nsp14A2-B109L109LctActG77AY.1200.00026
ORF1ab/nsp14A2-B109L109LctActG77AY.540.000667
ORF1ab/nsp14A2-B109L109LctActG66AY.3.10.000512
ORF1ab/nsp14A2-B109L109LctActG66B.1.1.2660.073171
ORF1ab/nsp14A2-B109L109LctActG66B.1.617.10.000774
ORF1ab/nsp14A2-B109L109LctActG66P.1.140.000287
ORF1ab/nsp14A2-B109L109LctActG45B.1.1.500.002716
ORF1ab/nsp14A2-B109L109LCtaTta15B.1.1.500.000679
ORF1ab/nsp14A2-B109L109LctActG55B.1.177.120.000758
ORF1ab/nsp14A2-B109L109LctActG55B.1.177.70.000824
ORF1ab/nsp14A2-B109L109LctActG55B.1.177.810.000947
ORF1ab/nsp14A2-B109L109LctActG55B.1.2060.004078
ORF1ab/nsp14A2-B109L109LctActG55Q.80.000825
ORF1ab/nsp14A2-B109L109LctActG44A.2.5.20.006289
ORF1ab/nsp14A2-B109L109LctActG44AY.1110.000733
ORF1ab/nsp14A2-B109L109LctActG44AY.1130.00057
ORF1ab/nsp14A2-B109L109LctActG34AY.330.0002
ORF1ab/nsp14A2-B109L109LCtaTta14AY.330.000067
ORF1ab/nsp14A2-B109L109LctActG44AY.4.20.000087
ORF1ab/nsp14A2-B109L109LctActG44AY.560.006421
ORF1ab/nsp14A2-B109L109LctActG44AY.90.00027
ORF1ab/nsp14A2-B109L109LctActG44B.1.1.10.001307
ORF1ab/nsp14A2-B109L109LctActG44B.1.6210.000354
ORF1ab/nsp14A2-B109L109LCtaTta34B.1.6370.000219
ORF1ab/nsp14A2-B109L109LctActG14B.1.6370.000073
ORF1ab/nsp14A2-B109L109LctActG33A.290.015957
ORF1ab/nsp14A2-B109L109LctActG33AY.116.10.000934
ORF1ab/nsp14A2-B109L109LctActG33AY.130.000483
ORF1ab/nsp14A2-B109L109LctActG33AY.240.001293
ORF1ab/nsp14A2-B109L109LctActG33AY.360.000445
ORF1ab/nsp14A2-B109L109LctActG33AY.4.2.10.000447
ORF1ab/nsp14A2-B109L109LctActG33AY.420.000121
ORF1ab/nsp14A2-B109L109LctActG33B.1.1.1610.010601
ORF1ab/nsp14A2-B109L109LctActG33B.1.1.3060.001315
ORF1ab/nsp14A2-B109L109LctActG33B.1.1.3360.05
ORF1ab/nsp14A2-B109L109LctActG33B.1.1600.000094
ORF1ab/nsp14A2-B109L109LctActG33B.1.4330.009585
ORF1ab/nsp14A2-B109L109LctActG33B.1.5260.000071
ORF1ab/nsp14A2-B109L109LctActG33P.1.70.000958
ORF1ab/nsp14A2-B109L109LctActG120.055556
ORF1ab/nsp14A2-B109L109LctActT120.055556
ORF1ab/nsp14A2-B109L109LctActT12A.20.000662
ORF1ab/nsp14A2-B109L109LctActG12A.20.000662
ORF1ab/nsp14A2-B109L109LctActG22A.2.50.000998
ORF1ab/nsp14A2-B109L109LctActG22AY.1160.000574
ORF1ab/nsp14A2-B109L109LctActG22AY.1180.000125
ORF1ab/nsp14A2-B109L109LCtaTta12AY.230.00007
ORF1ab/nsp14A2-B109L109LctActG12AY.230.00007
ORF1ab/nsp14A2-B109L109LctActG12AY.270.000065
ORF1ab/nsp14A2-B109L109LCtaTta12AY.270.000065
ORF1ab/nsp14A2-B109L109LctActG22AY.39.10.000079
ORF1ab/nsp14A2-B109L109LctActG22AY.610.00021
ORF1ab/nsp14A2-B109L109LctActG22AY.700.000417
ORF1ab/nsp14A2-B109L109LctActG22AY.730.001331
ORF1ab/nsp14A2-B109L109LCtaTta12AY.9.20.000037
ORF1ab/nsp14A2-B109L109LctActT12AY.9.20.000037
ORF1ab/nsp14A2-B109L109LctActG22B.1.1.2220.000408
ORF1ab/nsp14A2-B109L109LCtaTta22B.1.1.2690.002706
ORF1ab/nsp14A2-B109L109LctActG22B.1.1.3260.003521
ORF1ab/nsp14A2-B109L109LctActG22B.1.1.330.000842
ORF1ab/nsp14A2-B109L109LctActG22B.1.1.3680.006173
ORF1ab/nsp14A2-B109L109LctActG22B.1.177.60.001953
ORF1ab/nsp14A2-B109L109LCtaTta22B.1.4090.001563
ORF1ab/nsp14A2-B109L109LctActG22B.1.4280.002041
ORF1ab/nsp14A2-B109L109LctActG22B.1.5240.002813
ORF1ab/nsp14A2-B109L109LCtaTta12B.1.5250.000113
ORF1ab/nsp14A2-B109L109LctActG12B.1.5250.000113
ORF1ab/nsp14A2-B109L109LctActG22B.1.5760.001813
ORF1ab/nsp14A2-B109L109LCtaTta22P.20.000373
ORF1ab/nsp14A2-B109L109LctActG22Q.10.000253
ORF1ab/nsp14A2-B109L109LctActG11A.10.000282
ORF1ab/nsp14A2-B109L109LctActG11AY.1070.000466
ORF1ab/nsp14A2-B109L109LctActG11AY.1080.001103
ORF1ab/nsp14A2-B109L109LCtaTta11AY.120.10.000321
ORF1ab/nsp14A2-B109L109LctActG11AY.160.00038
ORF1ab/nsp14A2-B109L109LctActG11AY.16.10.00047
ORF1ab/nsp14A2-B109L109LctActG11AY.300.000396
ORF1ab/nsp14A2-B109L109LctActG11AY.350.000233
ORF1ab/nsp14A2-B109L109LctActG11AY.380.000499
ORF1ab/nsp14A2-B109L109LCtaTta11AY.4.50.000107
ORF1ab/nsp14A2-B109L109LctActG11AY.500.000799
ORF1ab/nsp14A2-B109L109LCtaTta11AY.550.000917
ORF1ab/nsp14A2-B109L109LctActG11AY.590.00053
ORF1ab/nsp14A2-B109L109LctActG11AY.620.000436
ORF1ab/nsp14A2-B109L109LctActG11AY.640.000595
ORF1ab/nsp14A2-B109L109LctActG11AY.670.000464
ORF1ab/nsp14A2-B109L109LctActG11AY.680.000274
ORF1ab/nsp14A2-B109L109LctActG11AY.690.000187
ORF1ab/nsp14A2-B109L109LctActT11AY.7.20.000559
ORF1ab/nsp14A2-B109L109LctActG11AY.710.000475
ORF1ab/nsp14A2-B109L109LctActG11AY.770.001127
ORF1ab/nsp14A2-B109L109LctActG11AY.780.001541
ORF1ab/nsp14A2-B109L109LctActG11AY.790.001211
ORF1ab/nsp14A2-B109L109LctActG11AY.860.00083
ORF1ab/nsp14A2-B109L109LctActG11AY.920.000287
ORF1ab/nsp14A2-B109L109LctActG11AZ.30.00152
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.1700.001247
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.2190.005
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.250.000569
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.2770.000759
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.2910.000742
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.3010.001179
ORF1ab/nsp14A2-B109L109LCtaTta11B.1.1.3170.000412
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.3440.010753
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.3690.000446
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.3740.002375
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.3780.007299
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.4340.000349
ORF1ab/nsp14A2-B109L109LCtaTta11B.1.1.460.004367
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.4660.008696
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.5280.004808
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.570.011494
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.630.000386
ORF1ab/nsp14A2-B109L109LctActG11B.1.1.700.000341
ORF1ab/nsp14A2-B109L109LctActG11B.1.1260.001276
ORF1ab/nsp14A2-B109L109LctActG11B.1.1490.003425
ORF1ab/nsp14A2-B109L109LctActG11B.1.160.330.004425
ORF1ab/nsp14A2-B109L109LctActG11B.1.177.150.000631
ORF1ab/nsp14A2-B109L109LctActG11B.1.177.690.001484
ORF1ab/nsp14A2-B109L109LctActG11B.1.2340.000132
ORF1ab/nsp14A2-B109L109LctActG11B.1.2410.000812
ORF1ab/nsp14A2-B109L109LctActG11B.1.2580.000067
ORF1ab/nsp14A2-B109L109LctActG11B.1.258.30.001675
ORF1ab/nsp14A2-B109L109LCtaTta11B.1.2980.002114
ORF1ab/nsp14A2-B109L109LctActG11B.1.36.360.000602
ORF1ab/nsp14A2-B109L109LctActG11B.1.36.390.002217
ORF1ab/nsp14A2-B109L109LctActG11B.1.4270.00005
ORF1ab/nsp14A2-B109L109LCtaTta11B.1.438.10.000107
ORF1ab/nsp14A2-B109L109LctActG11B.1.466.20.000391
ORF1ab/nsp14A2-B109L109LctActG11B.1.4700.001404
ORF1ab/nsp14A2-B109L109LctActG11B.1.5960.000087
ORF1ab/nsp14A2-B109L109LctActG11B.1.596.10.009346
ORF1ab/nsp14A2-B109L109LctActG11B.1.6180.004032
ORF1ab/nsp14A2-B109L109LctActG11C.10.002392
ORF1ab/nsp14A2-B109L109LctActG11C.36.30.000567
ORF1ab/nsp14A2-B109L109LctActG11C.370.000116
ORF1ab/nsp14A2-B109L109LctActG11C.60.037037
ORF1ab/nsp14A2-B109L109LctActG11D.20.000075
ORF1ab/nsp14A2-B109L109LctActG11R.10.00009