CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = K47del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B47K47del1K5972del1delAag-ag630.518178-18180
ORF1ab/nsp14A2-B47K47del1K5972del1delaaGaa-620.33333318178-18180
ORF1ab/nsp14A2-B47K47del1K5972del1delAAg-Gg610.16666718178-18180

Details of the mutation K47del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B47K47del1Aag-ag36All0.000001
ORF1ab/nsp14A2-B47K47del1aaGaa-26All0
ORF1ab/nsp14A2-B47K47del1AAg-Gg16All0
ORF1ab/nsp14A2-B47K47del1aaGaa-11A0.000387
ORF1ab/nsp14A2-B47K47del1Aag-ag11AY.4.50.000107
ORF1ab/nsp14A2-B47K47del1AAg-Gg11B.10.000009
ORF1ab/nsp14A2-B47K47del1aaGaa-11B.1.1.70.000001
ORF1ab/nsp14A2-B47K47del1Aag-ag11B.1.20.000009
ORF1ab/nsp14A2-B47K47del1Aag-ag11B.1.2220.001692