CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = K376del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B376K376del1K6301del1delaaAaa-1980.42105319165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAaa-aa1980.42105319165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAAa-Na1910.052631619165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAaACa-1910.052631619165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAaA-aT1910.052631619165-19167

Details of the mutation K376del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B376K376del1Aaa-aa819All0.000002
ORF1ab/nsp14A2-B376K376del1aaAaa-819All0.000002
ORF1ab/nsp14A2-B376K376del1AaA-aT119All0
ORF1ab/nsp14A2-B376K376del1AaACa-119All0
ORF1ab/nsp14A2-B376K376del1AAa-Na119All0
ORF1ab/nsp14A2-B376K376del1AaACa-13AY.250.000006
ORF1ab/nsp14A2-B376K376del1Aaa-aa13AY.250.000006
ORF1ab/nsp14A2-B376K376del1aaAaa-13AY.250.000006
ORF1ab/nsp14A2-B376K376del1aaAaa-23B.1.1.70.000002
ORF1ab/nsp14A2-B376K376del1Aaa-aa13B.1.1.70.000001
ORF1ab/nsp14A2-B376K376del1aaAaa-22AY.40.000003
ORF1ab/nsp14A2-B376K376del1Aaa-aa22B.10.000018
ORF1ab/nsp14A2-B376K376del1aaAaa-11AY.430.000004
ORF1ab/nsp14A2-B376K376del1aaAaa-11AY.720.001361
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.10.000018
ORF1ab/nsp14A2-B376K376del1AAa-Na11B.1.1.5190.00004
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.177.330.001645
ORF1ab/nsp14A2-B376K376del1aaAaa-11B.1.177.690.001484
ORF1ab/nsp14A2-B376K376del1AaA-aT11B.1.20.000009
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.3700.008
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.617.10.000129