CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = H455del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B455H455del2H6380del2delcATc--730.42857119402-19404
ORF1ab/nsp14A2-B455H455del2H6380del2delCAt--t720.28571419402-19404
ORF1ab/nsp14A2-B455H455del2H6380del2delCAT--N720.28571419402-19404

Details of the mutation H455del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B455H455del2cATc--37All0.000001
ORF1ab/nsp14A2-B455H455del2CAt--t27All0
ORF1ab/nsp14A2-B455H455del2CAT--N27All0
ORF1ab/nsp14A2-B455H455del2cATc--22AY.430.000009
ORF1ab/nsp14A2-B455H455del2cATc--11AY.520.000814
ORF1ab/nsp14A2-B455H455del2CAt--t11AY.850.000427
ORF1ab/nsp14A2-B455H455del2CAT--N11B.1.10.000018
ORF1ab/nsp14A2-B455H455del2CAt--t11B.1.177.190.001431
ORF1ab/nsp14A2-B455H455del2CAT--N11B.1.20.000009