CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = H455del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B455H455del1H6380del1delCat-at1340.30769219402-19404
ORF1ab/nsp14A2-B455H455del1H6380del1delcATcG-1340.30769219402-19404
ORF1ab/nsp14A2-B455H455del1H6380del1delCAT-NN1330.23076919402-19404
ORF1ab/nsp14A2-B455H455del1H6380del1delcaTca-1310.076923119402-19404
ORF1ab/nsp14A2-B455H455del1H6380del1delcAtc-t1310.076923119402-19404

Details of the mutation H455del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B455H455del1Cat-at413All0.000001
ORF1ab/nsp14A2-B455H455del1cATcG-413All0.000001
ORF1ab/nsp14A2-B455H455del1CAT-NN313All0.000001
ORF1ab/nsp14A2-B455H455del1cAtc-t113All0
ORF1ab/nsp14A2-B455H455del1caTca-113All0
ORF1ab/nsp14A2-B455H455del1Cat-at24B.10.000018
ORF1ab/nsp14A2-B455H455del1CAT-NN14B.10.000009
ORF1ab/nsp14A2-B455H455del1cATcG-14B.10.000009
ORF1ab/nsp14A2-B455H455del1Cat-at13B.1.1.70.000001
ORF1ab/nsp14A2-B455H455del1cAtc-t13B.1.1.70.000001
ORF1ab/nsp14A2-B455H455del1CAT-NN13B.1.1.70.000001
ORF1ab/nsp14A2-B455H455del1cATcG-11AY.420.00004
ORF1ab/nsp14A2-B455H455del1cATcG-11AY.430.000004
ORF1ab/nsp14A2-B455H455del1cATcG-11AY.46.60.000072
ORF1ab/nsp14A2-B455H455del1Cat-at11B.1.10.000018
ORF1ab/nsp14A2-B455H455del1CAT-NN11B.1.1600.000031
ORF1ab/nsp14A2-B455H455del1caTca-11P.1.10.000318