CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = F445del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B445F445del2F6370del2delTTC--N950.55555619372-19374
ORF1ab/nsp14A2-B445F445del2F6370del2delTTc--c920.22222219372-19374
ORF1ab/nsp14A2-B445F445del2F6370del2deltTCt--920.22222219372-19374

Details of the mutation F445del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B445F445del2TTC--N59All0.000001
ORF1ab/nsp14A2-B445F445del2TTc--c29All0
ORF1ab/nsp14A2-B445F445del2tTCt--29All0
ORF1ab/nsp14A2-B445F445del2TTC--N11AY.250.000006
ORF1ab/nsp14A2-B445F445del2TTC--N11AY.5.40.000277
ORF1ab/nsp14A2-B445F445del2tTCt--11AY.9.20.000037
ORF1ab/nsp14A2-B445F445del2TTC--N11B.1.10.000018
ORF1ab/nsp14A2-B445F445del2TTc--c11B.1.1.70.000001
ORF1ab/nsp14A2-B445F445del2TTC--N11B.1.20.000009
ORF1ab/nsp14A2-B445F445del2TTC--N11B.1.2430.00007
ORF1ab/nsp14A2-B445F445del2tTCt--11B.1.5460.003704
ORF1ab/nsp14A2-B445F445del2TTc--c11B.1.617.20.000004