CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = F445del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B445F445del1F6370del1delttCtt-620.33333319372-19374
ORF1ab/nsp14A2-B445F445del1F6370del1delTTC-NN620.33333319372-19374
ORF1ab/nsp14A2-B445F445del1F6370del1delTtC-tN610.16666719372-19374
ORF1ab/nsp14A2-B445F445del1F6370del1delTtc-tc610.16666719372-19374

Details of the mutation F445del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B445F445del1ttCtt-26All0
ORF1ab/nsp14A2-B445F445del1TTC-NN26All0
ORF1ab/nsp14A2-B445F445del1Ttc-tc16All0
ORF1ab/nsp14A2-B445F445del1TtC-tN16All0
ORF1ab/nsp14A2-B445F445del1ttCtt-11AY.200.000039
ORF1ab/nsp14A2-B445F445del1ttCtt-11AY.430.000004
ORF1ab/nsp14A2-B445F445del1TtC-tN11B.1.10.000018
ORF1ab/nsp14A2-B445F445del1Ttc-tc11B.1.1600.000031
ORF1ab/nsp14A2-B445F445del1TTC-NN11B.1.20.000009
ORF1ab/nsp14A2-B445F445del1TTC-NN11B.1.5260.000024