CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = F377L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B377F377LF6302LnonsynttCttA2501430.57219168-19170
ORF1ab/nsp14A2-B377F377LF6302LnonsynTtcCtc2501050.4219168-19170
ORF1ab/nsp14A2-B377F377LF6302LnonsynttCttG25020.00819168-19170

Details of the mutation F377L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B377F377LttCttA143250All0.000027
ORF1ab/nsp14A2-B377F377LTtcCtc105250All0.00002
ORF1ab/nsp14A2-B377F377LttCttG2250All0
ORF1ab/nsp14A2-B377F377LttCttA8282B.120.525641
ORF1ab/nsp14A2-B377F377LttCttA2525B.1.177.210.001912
ORF1ab/nsp14A2-B377F377LTtcCtc2424B.1.160.290.101266
ORF1ab/nsp14A2-B377F377LTtcCtc1818P.10.000284
ORF1ab/nsp14A2-B377F377LTtcCtc1216AY.40.000019
ORF1ab/nsp14A2-B377F377LttCttA316AY.40.000005
ORF1ab/nsp14A2-B377F377LttCttG116AY.40.000002
ORF1ab/nsp14A2-B377F377LttCttA812B.10.000073
ORF1ab/nsp14A2-B377F377LTtcCtc412B.10.000037
ORF1ab/nsp14A2-B377F377LttCttA47AY.430.000018
ORF1ab/nsp14A2-B377F377LTtcCtc37AY.430.000013
ORF1ab/nsp14A2-B377F377LTtcCtc67B.1.1.70.000005
ORF1ab/nsp14A2-B377F377LttCttA17B.1.1.70.000001
ORF1ab/nsp14A2-B377F377LTtcCtc45B.1.617.20.000015
ORF1ab/nsp14A2-B377F377LttCttA15B.1.617.20.000004
ORF1ab/nsp14A2-B377F377LTtcCtc33AY.1000.000138
ORF1ab/nsp14A2-B377F377LTtcCtc33AY.1030.000019
ORF1ab/nsp14A2-B377F377LttCttA23B0.000256
ORF1ab/nsp14A2-B377F377LTtcCtc13B0.000128
ORF1ab/nsp14A2-B377F377LTtcCtc23B.1.1770.000026
ORF1ab/nsp14A2-B377F377LttCttA13B.1.1770.000013
ORF1ab/nsp14A2-B377F377LttCttA220.111111
ORF1ab/nsp14A2-B377F377LTtcCtc22AY.1190.000071
ORF1ab/nsp14A2-B377F377LttCttA12AY.4.2.10.000149
ORF1ab/nsp14A2-B377F377LTtcCtc12AY.4.2.10.000149
ORF1ab/nsp14A2-B377F377LttCttA22AY.420.00008
ORF1ab/nsp14A2-B377F377LTtcCtc22AY.75.10.000361
ORF1ab/nsp14A2-B377F377LTtcCtc22B.1.2580.000133
ORF1ab/nsp14A2-B377F377LTtcCtc22C.300.003454
ORF1ab/nsp14A2-B377F377LttCttA11A0.000387
ORF1ab/nsp14A2-B377F377LttCttA11AY.1210.000135
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.140.000088
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.190.00114
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.250.000006
ORF1ab/nsp14A2-B377F377LttCttA11AY.330.000067
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.4.20.000022
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.4.50.000107
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.440.000006
ORF1ab/nsp14A2-B377F377LttCttA11AY.470.000031
ORF1ab/nsp14A2-B377F377LttCttA11AY.520.000814
ORF1ab/nsp14A2-B377F377LTtcCtc11AY.98.10.000048
ORF1ab/nsp14A2-B377F377LttCttG11B.1.10.000018
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.1.2200.001859
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.1.5190.00004
ORF1ab/nsp14A2-B377F377LttCttA11B.1.1150.021739
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.1600.000031
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.20.000009
ORF1ab/nsp14A2-B377F377LttCttA11B.1.3010.005917
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.3240.001605
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.4000.000429
ORF1ab/nsp14A2-B377F377LttCttA11B.1.4290.000024
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.4330.003195
ORF1ab/nsp14A2-B377F377LttCttA11B.1.5260.000024
ORF1ab/nsp14A2-B377F377LttCttA11B.1.5610.000397
ORF1ab/nsp14A2-B377F377LttCttA11B.1.6230.000536
ORF1ab/nsp14A2-B377F377LTtcCtc11B.1.6270.00202
ORF1ab/nsp14A2-B377F377LTtcCtc11C.37.10.002618