CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 377 | F377F | F6302F | syn | ttC | ttT | 10684 | 10684 | 1 | 19168-19170 |
Details of the mutation F377F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 10684 | 10684 | All | 0.002043 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1545 | 1545 | B.1.1.7 | 0.001383 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 974 | 974 | B.1.617.2 | 0.003668 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 869 | 869 | B.1.1.10 | 0.968785 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 576 | 576 | AY.4 | 0.000896 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 529 | 529 | AY.43 | 0.002344 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 526 | 526 | B.1.2 | 0.004632 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 525 | 525 | L.1 | 1 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 282 | 282 | AY.4.2.1 | 0.042014 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 272 | 272 | L.3 | 0.964539 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 237 | 237 | AY.103 | 0.001472 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 222 | 222 | AY.25 | 0.001335 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 212 | 212 | AY.44 | 0.00129 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 180 | 180 | B.1 | 0.001649 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 159 | 159 | AY.14 | 0.013994 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 127 | 127 | AY.3 | 0.001263 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 112 | 112 | AY.100 | 0.005153 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 105 | 105 | AY.39 | 0.002595 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 102 | 102 | P.1 | 0.001607 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 101 | 101 | B.1.1.519 | 0.004011 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 101 | 101 | B.1.221.2 | 0.405622 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 100 | 100 | B.1.526 | 0.00235 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 88 | 88 | L.2 | 1 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 85 | 85 | B.1.221.4 | 0.354167 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 77 | 77 | D.2 | 0.005778 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 76 | 76 | B.1.1 | 0.001379 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 72 | 72 | AY.62 | 0.031373 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 72 | 72 | AY.90 | 0.049281 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 63 | 63 | B.1.160 | 0.001965 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 62 | 62 | B.1.1.222 | 0.012648 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 61 | 61 | B.1.416.1 | 0.095312 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 60 | 60 | B.1.188 | 1 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 56 | 56 | AY.102 | 0.001485 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 50 | 50 | AY.119 | 0.001765 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 50 | 50 | B.1.177 | 0.000658 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 45 | 45 | A.23.1 | 0.03169 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 41 | 41 | B.1.1.318 | 0.012372 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 41 | 41 | B.1.351 | 0.001219 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 40 | 40 | AY.26 | 0.001132 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 38 | 38 | P.1.17 | 0.006147 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 37 | 37 | AY.20 | 0.001438 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 37 | 37 | B.1.595.3 | 0.973684 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 36 | 36 | AY.9.2 | 0.001322 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 36 | 36 | B.1.177.5 | 0.04472 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 34 | 34 | B.1.1.306 | 0.014906 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 33 | 33 | B.1.221 | 0.002344 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 32 | 32 | AY.6 | 0.001316 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 31 | 31 | AY.4.2 | 0.000672 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 28 | 28 | AY.5 | 0.000578 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 27 | 27 | AF.1 | 1 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 27 | 27 | AY.29 | 0.000426 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 27 | 27 | AY.53 | 0.007763 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 27 | 27 | B.1.1.420 | 0.027163 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 27 | 27 | B.1.400 | 0.011583 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 26 | 26 | B.1.595 | 0.006785 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 25 | 25 | AY.23 | 0.001744 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 24 | 24 | AY.9.1 | 0.002009 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 24 | 24 | C.37 | 0.002786 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 23 | 23 | AY.121 | 0.003112 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 23 | 23 | AY.81 | 0.045817 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 23 | 23 | B.1.621 | 0.002036 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 22 | 22 | B.1.438.1 | 0.00236 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 22 | 22 | B.1.596 | 0.001917 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 21 | 21 | AY.120 | 0.000781 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 21 | 21 | AY.47 | 0.000653 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 21 | 21 | AY.75 | 0.001176 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 21 | 21 | B.1.177.81 | 0.003976 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 21 | 21 | B.1.258 | 0.001397 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 21 | 21 | B.1.429 | 0.000494 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 20 | 20 | AY.33 | 0.001336 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 20 | 20 | AY.46.6 | 0.001444 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 20 | 20 | B.1.1.25 | 0.01137 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 20 | 20 | L.4 | 1 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 19 | 19 | B.1.199 | 0.078512 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 19 | 19 | B.1.396 | 0.013409 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 18 | 18 | B.4.6 | 0.3 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 17 | 17 | B.1.1.317 | 0.006999 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 17 | 17 | P.2 | 0.003173 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 16 | 16 | AY.46 | 0.001665 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 16 | 16 | B.1.427 | 0.000808 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 15 | 15 | AY.45 | 0.001825 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | AY.117 | 0.001099 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | AY.27 | 0.000841 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | AY.42 | 0.000523 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | B.1.1.311 | 0.004656 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | B.1.243 | 0.000905 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | B.1.406 | 0.078788 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 13 | 13 | B.1.466.2 | 0.005086 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 12 | 12 | B | 0.001534 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 11 | 11 | B.1.1.434 | 0.003834 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 11 | 11 | B.1.637 | 0.000804 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 10 | 10 | B.1.1.33 | 0.004209 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 10 | 10 | B.1.1.440 | 0.117647 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 10 | 10 | B.1.177.60 | 0.002184 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 9 | 9 | AY.39.1 | 0.000357 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 9 | 9 | AY.61 | 0.000943 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 9 | 9 | B.1.1.28 | 0.002801 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 9 | 9 | B.1.632 | 0.060403 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | AY.4.5 | 0.00086 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | B.1.459 | 0.032653 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | B.1.587 | 0.01518 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | B.1.609 | 0.003835 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | B.1.621.1 | 0.004047 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 8 | 8 | B.1.628 | 0.002819 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | AY.109 | 0.005178 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | AY.68 | 0.001916 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | AY.95 | 0.005327 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | B.1.206 | 0.00571 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | B.1.36.29 | 0.003621 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | B.1.582 | 0.003435 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 7 | 7 | Q.1 | 0.000884 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 6 | 6 | AY.34.1 | 0.00306 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 6 | 6 | AY.92 | 0.001724 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 6 | 6 | AY.98 | 0.000474 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 6 | 6 | B.1.147 | 0.004535 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 6 | 6 | B.1.597 | 0.027778 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | AY.105 | 0.003215 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | AY.110 | 0.000563 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | AY.23.1 | 0.002087 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | AY.41 | 0.00147 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | AY.79 | 0.006053 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | B.1.1.133 | 0.042373 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | B.1.1.369 | 0.002231 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | B.1.351.2 | 0.001513 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | A.28 | 0.010582 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.111 | 0.000733 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.113 | 0.00057 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.114 | 0.000924 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.55 | 0.00367 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.7 | 0.000784 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.93 | 0.001092 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.1.348 | 0.003185 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.1.39 | 0.002039 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.1.70 | 0.001364 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.177.65 | 0.002661 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.279 | 0.002054 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.369 | 0.001141 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.404 | 0.005208 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.509 | 0.003463 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.580 | 0.01626 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | B.1.619 | 0.003484 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | P.1.15 | 0.000929 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 4 | 4 | Q.7 | 0.004444 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | 0.166667 | |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.29.1 | 0.000662 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.37 | 0.000948 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.51 | 0.002727 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.67 | 0.001393 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.71 | 0.001425 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.1.351 | 0.00838 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.177.21 | 0.000229 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.177.82 | 0.001432 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.3 | 0.007853 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.548 | 0.107143 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.1.576 | 0.00272 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.4 | 0.006623 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.58 | 0.030612 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | B.6.6 | 0.002667 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | A.29 | 0.010638 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.120.2.1 | 0.000997 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.46.5 | 0.000397 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.64 | 0.00119 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.89 | 0.009804 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.1.307 | 0.005063 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.1.448 | 0.004065 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.110.3 | 0.001437 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.146 | 0.008475 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.177.50 | 0.00939 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.177.83 | 0.002963 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.210 | 0.004264 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.381 | 0.015625 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.411 | 0.007407 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.416 | 0.002538 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.456 | 0.006536 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | B.1.618 | 0.008065 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | C.14 | 0.008658 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.138 | 0.006061 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.171 | 0.003676 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.255 | 0.00303 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.378 | 0.007299 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.412 | 0.007634 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.1.95 | 0.019608 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.160.22 | 0.006757 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.48 | 0.003125 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.187 | 0.033333 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.289 | 0.00266 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.332 | 0.003497 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.348 | 0.018182 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.441 | 0.009615 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.505 | 0.004386 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.543 | 0.01 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.589 | 0.007576 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.596.1 | 0.009346 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.601 | 0.030303 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.606 | 0.006024 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.9 | 0.006173 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.10 | 0.008264 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.11 | 0.005128 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp14A2-B | 377 | F377F | ttC | ttT | 1 | 1 | P.1.7 | 0.000319 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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