CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = E204D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp14A2-B	204	E204D	E6129D	nonsyn	gaG	gaT	14238	8072	0.566934	18649-18651
ORF1ab/nsp14A2-B	204	E204D	E6129D	nonsyn	gaG	gaC	14238	6166	0.433066	18649-18651

Details of the mutation E204D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	8072	14238	All	0.001544
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	6166	14238	All	0.001179
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	6058	6058	AY.74	0.70059
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2941	2946	B.1.1.7	0.002633
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	5	2946	B.1.1.7	0.000004
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	824	826	AY.4	0.001282
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	2	826	AY.4	0.000003
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	416	416	B.1.279	0.213662
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	404	404	B.1.177.21	0.030894
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	396	396	A.23.1	0.278873
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	263	278	B.1.617.2	0.00099
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	15	278	B.1.617.2	0.000056
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	175	175	AY.43	0.000775
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	169	169	AY.103	0.001049
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	141	142	AY.47	0.004386
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	142	AY.47	0.000031
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	133	133	AY.33	0.008881
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	119	119	B.1.2	0.001048
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	113	113	B.1.541	0.5
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	100	100	B.1.177	0.001317
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	96	98	AY.44	0.000584
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	2	98	AY.44	0.000012
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	92	93	AY.25	0.000553
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	93	AY.25	0.000006
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	84	84	B.1.369	0.023959
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	78	79	B.1	0.000714
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	79	B.1	0.000009
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	74	74	AY.4.5	0.007954
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	71	71	AY.5	0.001466
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	69	70	B.1.1	0.001252
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	70	B.1.1	0.000018
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	69	69	B.1.243.2	1
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	65	65	P.1	0.001024
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	63	63	B.1.351	0.001873
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	50	50	AY.98	0.00395
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	37	49	AY.21	0.070209
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	12	49	AY.21	0.02277
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	47	47	B.1.1.519	0.001866
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	42	42	AY.3	0.000418
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	40	40	B.1.599	0.145985
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	37	37	AY.39	0.000914
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	37	37	B.1.1.189	0.055976
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	37	37	B.1.1.432	0.046835
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	37	37	B.1.311	0.010159
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	31	31	AY.4.2	0.000672
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	27	27	AY.102	0.000716
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	24	25	AY.54	0.002288
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	25	AY.54	0.000095
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	25	25	B.1.525	0.002829
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	21	21	AY.29	0.000331
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	19	19	B.1.160	0.000593
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	19	19	B.1.258	0.001264
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	13	17	AY.45	0.001582
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	4	17	AY.45	0.000487
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	17	17	B.1.1.298	0.014655
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	16	16	AY.42	0.000644
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	16	16	B.1.637	0.001169
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	12	14	B.1.427	0.000606
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	2	14	B.1.427	0.000101
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	14	14	Q.1	0.001769
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	13	13	AY.4.4	0.005319
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	13	13	AY.46.6	0.000939
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	13	13	B.1.1.369	0.005801
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	13	13	B.1.36.8	0.013
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	12	12	C.36.3	0.006807
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	11	11	AY.46	0.001145
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	11	11	B.1.221	0.000781
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	11	11	P.1.14	0.000526
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	10	10	B.1.1.222	0.00204
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	10	10	B.1.1.50	0.006789
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	9	9	AY.23	0.000628
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	8	9	AY.35	0.001864
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	9	AY.35	0.000233
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	9	9	AZ.2	0.007389
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	8	AY.113	0.000997
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	8	AY.113	0.000142
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	6	8	AY.5.3	0.002024
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	8	AY.5.3	0.000675
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	8	8	B.1.243	0.000557
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	8	8	B.1.36.29	0.004139
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	8	8	B.1.621	0.000708
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	8	D.2	0.000525
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	8	D.2	0.000075
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	8	8	P.2	0.001493
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	AY.36	0.001037
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	AY.40	0.00675
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	AY.9.2	0.000257
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	B.1.1.28	0.002179
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	B.1.1.70	0.002387
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	B.1.36	0.001021
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	7	7	B.1.422	0.005686
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	6	6	AY.26	0.00017
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	6	AY.61	0.000524
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	6	AY.61	0.000105
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	6	6	AY.84	0.002625
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	6	6	B.1.1.348	0.004777
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	6	6	B.1.36.39	0.013304
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	6	6	B.1.526	0.000141
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	5	AY.119	0.000106
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	2	5	AY.119	0.000071
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	5	AY.20	0.000194
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	5	B.1.160.16	0.004647
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	5	B.1.177.51	0.022831
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	5	B.1.596	0.000436
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	5	C.16	0.005302
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	5	5	Q.8	0.000825
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	4	4	AY.7.2	0.002237
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	4	4	AY.99.2	0.000369
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	4	4	B.1.258.17	0.000416
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	4	4	B.1.429	0.000094
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	4	4	B.1.595	0.001044
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	AY.1	0.001187
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	AY.116	0.00086
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	AY.120.1	0.000963
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	3	AY.13	0.000322
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	3	AY.13	0.000161
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	3	3	AY.24	0.001293
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	AY.3.1	0.000256
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	AY.39.1	0.000119
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	AY.4.2.1	0.000447
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	3	AY.55	0.001835
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	3	AY.55	0.000917
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	3	AY.62	0.000871
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	3	AY.62	0.000436
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	3	AY.75	0.000112
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	3	AY.75	0.000056
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B	0.000383
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.1.216	0.002671
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	2	3	B.1.1.306	0.000877
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	3	B.1.1.306	0.000438
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.1.412	0.022901
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.177.16	0.001993
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.201	0.017045
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.214.2	0.001799
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.400	0.001287
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.438.1	0.000322
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	B.1.575	0.00091
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	3	3	P.1.17	0.000485
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AD.2	0.000438
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AY.100	0.000092
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	2	AY.106	0.000335
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	2	AY.106	0.000335
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AY.117	0.000169
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AY.118	0.000125
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AY.27	0.000129
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	2	2	AY.67	0.000929
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AY.87	0.001665
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	AY.98.1	0.000097
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.1.157	0.001826
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.1.288	0.003831
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.1.39	0.001019
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.1.409	0.005666
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.1.434	0.000697
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.1.528	0.009615
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.157	0.00597
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.177.57	0.000562
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.177.73	0.001133
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.232	0.001075
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.258.6	0.039216
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.36.18	0.00084
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.469	0.00722
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.487	0.039216
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.505	0.008772
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.521	0.00995
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.1.564	0.000852
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	B.3.1	0.003317
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	C.36	0.001821
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	C.37	0.000232
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	L.3	0.007092
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	2	2	R.1	0.00018
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	A.2.2	0.001689
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AL.1	0.012987
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AT.1	0.005128
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.110	0.000113
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.111	0.000183
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.12	0.000316
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.120	0.000037
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.120.2.1	0.000498
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.16	0.00038
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.16.1	0.00047
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.28	0.00189
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.32	0.000532
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.37	0.000316
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.38	0.000499
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.41	0.000294
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.46.5	0.000198
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.5.1	0.003759
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	1	AY.53	0.000288
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.57	0.000656
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.59	0.00053
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.6	0.000041
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.65	0.000533
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.68	0.000274
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.7	0.000196
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.71	0.000475
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.75.1	0.00018
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	1	AY.88	0.000884
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.9.1	0.000084
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	AY.96	0.002075
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.125	0.010204
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.174	0.003378
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.176	0.000439
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.220	0.001859
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.294	0.001266
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.316	0.000925
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.317	0.000412
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.318	0.000302
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.329	0.003846
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.332	0.03125
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.337	0.003597
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.349	0.010309
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.354	0.004386
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.402	0.011111
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.416	0.000905
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.47	0.005348
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.63	0.000386
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.1.99	0.02381
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.119	0.010526
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.139	0.000733
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.177.50	0.004695
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.177.52	0.001757
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.177.54	0.000606
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.177.80	0.001912
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.177.86	0.000183
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.212	0.016667
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.236	0.002053
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.333	0.010526
ORF1ab/nsp14A2-B	204	E204D	gaG	gaC	1	1	B.1.343	0.020833
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.349	0.000715
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.351.3	0.000876
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.36.10	0.004785
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.36.16	0.001425
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.36.22	0.001208
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.36.38	0.001642
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.366	0.004878
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.415.1	0.007576
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.426	0.001009
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.441	0.009615
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.468	0.005714
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.499	0.00105
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.520	0.021739
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.546	0.003704
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.554	0.004405
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.560	0.00463
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.568	0.001111
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.597	0.00463
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.606	0.006024
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.609	0.000479
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.617.1	0.000129
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.628	0.000352
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.1.8	0.001972
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.4.1	0.018868
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	B.6	0.00091
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	N.3	0.005814
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	N.5	0.001767
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	P.1.1	0.000318
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	P.1.12	0.000484
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	P.1.15	0.000232
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	P.1.16	0.000374
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	P.1.7	0.000319
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	Q.3	0.000145
ORF1ab/nsp14A2-B	204	E204D	gaG	gaT	1	1	Q.4	0.000455

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.