CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 30 | D30D | D5955D | syn | gaC | gaT | 9663 | 9663 | 1 | 18127-18129 |
Details of the mutation D30D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9663 | 9663 | All | 0.001848 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3982 | 3982 | P.1.15 | 0.925186 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1609 | 1609 | AY.4 | 0.002504 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 965 | 965 | B.1.1.7 | 0.000864 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 251 | 251 | A.21 | 0.695291 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 233 | 233 | B.1 | 0.002134 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 188 | 188 | P.1 | 0.002962 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 160 | 160 | AY.44 | 0.000974 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 154 | 154 | B.1.2 | 0.001356 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 153 | 153 | B.1.617.2 | 0.000576 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 146 | 146 | B.1.177 | 0.001922 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 126 | 126 | AY.4.5 | 0.013544 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 109 | 109 | B.1.235 | 0.274559 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 104 | 104 | AY.25 | 0.000626 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 103 | 103 | B.1.571 | 1 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 77 | 77 | AY.119 | 0.002719 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 75 | 75 | B.1.1 | 0.001361 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 56 | 56 | AY.45 | 0.006814 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 55 | 55 | AY.9.1 | 0.004605 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 45 | 45 | B.1.258 | 0.002995 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 41 | 41 | AY.120.1 | 0.013162 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 39 | 39 | B.1.1.201 | 0.95122 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 37 | 37 | AY.102 | 0.000981 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 37 | 37 | AY.103 | 0.00023 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 37 | 37 | B.1.623 | 0.01985 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 28 | 28 | B.1.351 | 0.000832 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 25 | 25 | AY.43 | 0.000111 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 24 | 24 | AY.3 | 0.000239 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 22 | 22 | AY.42 | 0.000885 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 20 | 20 | B.1.177.21 | 0.001529 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 20 | 20 | B.1.36.38 | 0.032841 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 20 | 20 | C.37 | 0.002321 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 19 | 19 | B.1.177.86 | 0.003486 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 17 | 17 | AY.13 | 0.002737 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 16 | 16 | B.1.1.63 | 0.006173 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 15 | 15 | AY.23 | 0.001046 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 15 | 15 | AY.29 | 0.000237 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 14 | 14 | B.1.1.519 | 0.000556 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 14 | 14 | B.1.36.27 | 0.010687 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 13 | 13 | AY.9 | 0.000879 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 12 | 12 | AY.73 | 0.007984 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 11 | 11 | AY.107 | 0.005126 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 11 | 11 | AY.39 | 0.000272 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 11 | 11 | B.1.576 | 0.009973 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 10 | 10 | AY.33 | 0.000668 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 10 | 10 | B.1.621 | 0.000885 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | AY.14 | 0.000792 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | AY.20 | 0.00035 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | B.1.1.37 | 0.001736 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | B.1.36.22 | 0.01087 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | B.1.429 | 0.000212 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | B.1.525 | 0.001018 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 9 | 9 | B.1.526 | 0.000212 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 8 | 8 | AY.26 | 0.000226 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 8 | 8 | B.1.1.28 | 0.00249 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 8 | 8 | B.1.243 | 0.000557 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 8 | 8 | P.1.14 | 0.000382 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | A | 0.002709 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | AY.113 | 0.000997 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | AY.99.2 | 0.000645 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | B.1.1.297 | 0.01566 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | B.1.1.348 | 0.005573 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | B.1.351.2 | 0.002118 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | B.1.36.8 | 0.007 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | B.1.617.1 | 0.000903 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | AY.100 | 0.000276 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | AY.27 | 0.000388 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | AY.75 | 0.000336 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | AY.9.2 | 0.00022 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | B.1.438.1 | 0.000644 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | B.1.627 | 0.012121 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | B.1.634 | 0.020548 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | P.1.17 | 0.000971 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | P.6 | 0.018868 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 6 | 6 | Q.8 | 0.000989 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | AY.5 | 0.000103 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | AY.83 | 0.008621 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | B.1.1.230 | 0.045872 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | B.1.177.54 | 0.003032 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | P.1.1 | 0.001588 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | P.1.16 | 0.001871 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | AY.120.2 | 0.005141 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | B.1.206 | 0.003263 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | B.1.408 | 0.01476 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | B.1.609 | 0.001918 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 4 | 4 | Q.3 | 0.00058 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | AY.56 | 0.004815 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.1.306 | 0.001315 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.195 | 0.015075 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 3 | 3 | B.1.617.3 | 0.008955 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.1.137 | 0.025 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.177.33 | 0.003289 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.243.2 | 0.028986 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.36.18 | 0.00084 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.36.26 | 0.005714 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.371 | 0.002245 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.530 | 0.014286 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | P.1.13 | 0.001797 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.203 | 0.016949 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.210 | 0.005714 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.359 | 0.027778 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.373 | 0.02381 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.120 | 0.007692 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.160.27 | 0.015152 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.258.3 | 0.001675 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.294 | 0.032258 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.501 | 0.007353 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.511 | 0.034483 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.554 | 0.004405 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.606 | 0.006024 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | C.31 | 0.017857 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp14A2-B | 30 | D30D | gaC | gaT | 1 | 1 | P.1.11 | 0.010204 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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