CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A504del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B504A504del2A6429del2delGCt--t32250.7812519549-19551
ORF1ab/nsp14A2-B504A504del2A6429del2delGCT--N3240.12519549-19551
ORF1ab/nsp14A2-B504A504del2A6429del2delgCTg--3210.0312519549-19551
ORF1ab/nsp14A2-B504A504del2A6429del2delGCT--A3210.0312519549-19551
ORF1ab/nsp14A2-B504A504del2A6429del2delGCT--C3210.0312519549-19551

Details of the mutation A504del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B504A504del2GCt--t2532All0.000005
ORF1ab/nsp14A2-B504A504del2GCT--N432All0.000001
ORF1ab/nsp14A2-B504A504del2GCT--A132All0
ORF1ab/nsp14A2-B504A504del2gCTg--132All0
ORF1ab/nsp14A2-B504A504del2GCT--C132All0
ORF1ab/nsp14A2-B504A504del2GCt--t99AY.430.00004
ORF1ab/nsp14A2-B504A504del2GCt--t66AY.250.000036
ORF1ab/nsp14A2-B504A504del2GCT--N13B.10.000009
ORF1ab/nsp14A2-B504A504del2GCt--t13B.10.000009
ORF1ab/nsp14A2-B504A504del2GCT--C13B.10.000009
ORF1ab/nsp14A2-B504A504del2GCt--t220.111111
ORF1ab/nsp14A2-B504A504del2gCTg--12AY.34.10.00051
ORF1ab/nsp14A2-B504A504del2GCt--t12AY.34.10.00051
ORF1ab/nsp14A2-B504A504del2GCT--A11AY.1190.000035
ORF1ab/nsp14A2-B504A504del2GCT--N11AY.30.00001
ORF1ab/nsp14A2-B504A504del2GCt--t11AY.780.001541
ORF1ab/nsp14A2-B504A504del2GCt--t11AY.850.000427
ORF1ab/nsp14A2-B504A504del2GCt--t11AY.99.20.000092
ORF1ab/nsp14A2-B504A504del2GCt--t11B.1.1.70.000001
ORF1ab/nsp14A2-B504A504del2GCT--N11B.1.20.000009
ORF1ab/nsp14A2-B504A504del2GCT--N11B.1.3510.00003
ORF1ab/nsp14A2-B504A504del2GCt--t11B.1.3950.007042
ORF1ab/nsp14A2-B504A504del2GCt--t11P.1.120.000484