CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A504X

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B504A504XA6429XnonsynGCTTAA760.85714319549-19551
ORF1ab/nsp14A2-B504A504XA6429XnonsynGCTTAG710.14285719549-19551

Details of the mutation A504X within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B504A504XGCTTAA67All0.000001
ORF1ab/nsp14A2-B504A504XGCTTAG17All0
ORF1ab/nsp14A2-B504A504XGCTTAA33AY.1100.000338
ORF1ab/nsp14A2-B504A504XGCTTAA12AY.430.000004
ORF1ab/nsp14A2-B504A504XGCTTAG12AY.430.000004
ORF1ab/nsp14A2-B504A504XGCTTAA11AY.30.00001
ORF1ab/nsp14A2-B504A504XGCTTAA11AY.420.00004