CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A504P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B504A504PA6429PnonsynGctCct1890.519549-19551
ORF1ab/nsp14A2-B504A504PA6429PnonsynGcTCcC1870.38888919549-19551
ORF1ab/nsp14A2-B504A504PA6429PnonsynGcTCcA1820.11111119549-19551

Details of the mutation A504P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B504A504PGctCct918All0.000002
ORF1ab/nsp14A2-B504A504PGcTCcC718All0.000001
ORF1ab/nsp14A2-B504A504PGcTCcA218All0
ORF1ab/nsp14A2-B504A504PGctCct23AY.430.000009
ORF1ab/nsp14A2-B504A504PGcTCcA13AY.430.000004
ORF1ab/nsp14A2-B504A504PGcTCcC23B.1.1.70.000002
ORF1ab/nsp14A2-B504A504PGctCct13B.1.1.70.000001
ORF1ab/nsp14A2-B504A504PGcTCcC12AY.590.00053
ORF1ab/nsp14A2-B504A504PGcTCcA12AY.590.00053
ORF1ab/nsp14A2-B504A504PGctCct11AY.40.000002
ORF1ab/nsp14A2-B504A504PGcTCcC11AY.440.000006
ORF1ab/nsp14A2-B504A504PGctCct11AY.450.000122
ORF1ab/nsp14A2-B504A504PGcTCcC11AY.850.000427
ORF1ab/nsp14A2-B504A504PGcTCcC11B.10.000009
ORF1ab/nsp14A2-B504A504PGcTCcC11B.1.10.000018
ORF1ab/nsp14A2-B504A504PGctCct11B.1.1600.000031
ORF1ab/nsp14A2-B504A504PGctCct11B.1.1770.000013
ORF1ab/nsp14A2-B504A504PGctCct11B.1.20.000009
ORF1ab/nsp14A2-B504A504PGctCct11B.1.4970.000315