CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A504L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B504A504LA6429LnonsynGCTTTA420.519549-19551
ORF1ab/nsp14A2-B504A504LA6429LnonsynGCTCTG410.2519549-19551
ORF1ab/nsp14A2-B504A504LA6429LnonsynGCTCTA410.2519549-19551

Details of the mutation A504L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B504A504LGCTTTA24All0
ORF1ab/nsp14A2-B504A504LGCTCTG14All0
ORF1ab/nsp14A2-B504A504LGCTCTA14All0
ORF1ab/nsp14A2-B504A504LGCTTTA11AY.1100.000113
ORF1ab/nsp14A2-B504A504LGCTCTA11AY.430.000004
ORF1ab/nsp14A2-B504A504LGCTTTA11B.1.10.000018
ORF1ab/nsp14A2-B504A504LGCTCTG11B.1.1.70.000001