CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A504I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B504A504IA6429InonsynGCTATA2190.42857119549-19551
ORF1ab/nsp14A2-B504A504IA6429InonsynGCtATt2170.33333319549-19551
ORF1ab/nsp14A2-B504A504IA6429InonsynGCTATC2150.23809519549-19551

Details of the mutation A504I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B504A504IGCTATA921All0.000002
ORF1ab/nsp14A2-B504A504IGCtATt721All0.000001
ORF1ab/nsp14A2-B504A504IGCTATC521All0.000001
ORF1ab/nsp14A2-B504A504IGCTATA46AY.430.000018
ORF1ab/nsp14A2-B504A504IGCtATt26AY.430.000009
ORF1ab/nsp14A2-B504A504IGCtATt12AY.1020.000027
ORF1ab/nsp14A2-B504A504IGCTATA12AY.1020.000027
ORF1ab/nsp14A2-B504A504IGCTATA12AY.1100.000113
ORF1ab/nsp14A2-B504A504IGCtATt12AY.1100.000113
ORF1ab/nsp14A2-B504A504IGCTATA12AY.330.000067
ORF1ab/nsp14A2-B504A504IGCtATt12AY.330.000067
ORF1ab/nsp14A2-B504A504IGCTATA12AY.46.60.000072
ORF1ab/nsp14A2-B504A504IGCtATt12AY.46.60.000072
ORF1ab/nsp14A2-B504A504IGCTATC22B.1.10.000036
ORF1ab/nsp14A2-B504A504IGCTATA11AY.30.00001
ORF1ab/nsp14A2-B504A504IGCtATt11AY.9.20.000037
ORF1ab/nsp14A2-B504A504IGCTATC11B.10.000009
ORF1ab/nsp14A2-B504A504IGCTATC11B.1.1.1890.001513
ORF1ab/nsp14A2-B504A504IGCTATC11B.1.360.000146