CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A504G

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B504A504GA6429GnonsyngCtgGt30260.86666719549-19551
ORF1ab/nsp14A2-B504A504GA6429GnonsyngCTgGA3030.119549-19551
ORF1ab/nsp14A2-B504A504GA6429GnonsyngCTgGC3010.033333319549-19551

Details of the mutation A504G within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B504A504GgCtgGt2630All0.000005
ORF1ab/nsp14A2-B504A504GgCTgGA330All0.000001
ORF1ab/nsp14A2-B504A504GgCTgGC130All0
ORF1ab/nsp14A2-B504A504GgCtgGt99AY.430.00004
ORF1ab/nsp14A2-B504A504GgCtgGt44AY.1030.000025
ORF1ab/nsp14A2-B504A504GgCTgGA120.055556
ORF1ab/nsp14A2-B504A504GgCtgGt120.055556
ORF1ab/nsp14A2-B504A504GgCtgGt22AY.30.00002
ORF1ab/nsp14A2-B504A504GgCtgGt22AY.40.000003
ORF1ab/nsp14A2-B504A504GgCtgGt12AZ.20.000821
ORF1ab/nsp14A2-B504A504GgCTgGA12AZ.20.000821
ORF1ab/nsp14A2-B504A504GgCtgGt12B.1.1.70.000001
ORF1ab/nsp14A2-B504A504GgCTgGC12B.1.1.70.000001
ORF1ab/nsp14A2-B504A504GgCtgGt11AY.1020.000027
ORF1ab/nsp14A2-B504A504GgCtgGt11AY.250.000006
ORF1ab/nsp14A2-B504A504GgCtgGt11AY.5.30.000337
ORF1ab/nsp14A2-B504A504GgCtgGt11AY.750.000056
ORF1ab/nsp14A2-B504A504GgCTgGA11AY.910.00073
ORF1ab/nsp14A2-B504A504GgCtgGt11C.370.000116
ORF1ab/nsp14A2-B504A504GgCtgGt11P.30.001595