CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A220A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B220A220AA6145AsyngcTgcC17168680.50582718697-18699
ORF1ab/nsp14A2-B220A220AA6145AsyngcTgcG17168350.48659718697-18699
ORF1ab/nsp14A2-B220A220AA6145AsyngcTgcA1716130.0075757618697-18699

Details of the mutation A220A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B220A220AgcTgcC8681716All0.000166
ORF1ab/nsp14A2-B220A220AgcTgcG8351716All0.00016
ORF1ab/nsp14A2-B220A220AgcTgcA131716All0.000002
ORF1ab/nsp14A2-B220A220AgcTgcG735735AY.800.829571
ORF1ab/nsp14A2-B220A220AgcTgcC667706B.1.1.70.000597
ORF1ab/nsp14A2-B220A220AgcTgcG37706B.1.1.70.000033
ORF1ab/nsp14A2-B220A220AgcTgcA2706B.1.1.70.000002
ORF1ab/nsp14A2-B220A220AgcTgcC95102AY.40.000148
ORF1ab/nsp14A2-B220A220AgcTgcG7102AY.40.000011
ORF1ab/nsp14A2-B220A220AgcTgcG1720B.1.20.00015
ORF1ab/nsp14A2-B220A220AgcTgcC320B.1.20.000026
ORF1ab/nsp14A2-B220A220AgcTgcG510B.1.617.20.000019
ORF1ab/nsp14A2-B220A220AgcTgcC510B.1.617.20.000019
ORF1ab/nsp14A2-B220A220AgcTgcC48AY.430.000018
ORF1ab/nsp14A2-B220A220AgcTgcG38AY.430.000013
ORF1ab/nsp14A2-B220A220AgcTgcA18AY.430.000004
ORF1ab/nsp14A2-B220A220AgcTgcC57AY.390.000124
ORF1ab/nsp14A2-B220A220AgcTgcG27AY.390.000049
ORF1ab/nsp14A2-B220A220AgcTgcC77B.1.2580.000466
ORF1ab/nsp14A2-B220A220AgcTgcC36AY.250.000018
ORF1ab/nsp14A2-B220A220AgcTgcG36AY.250.000018
ORF1ab/nsp14A2-B220A220AgcTgcC46AY.440.000024
ORF1ab/nsp14A2-B220A220AgcTgcG26AY.440.000012
ORF1ab/nsp14A2-B220A220AgcTgcC36B.1.360.000438
ORF1ab/nsp14A2-B220A220AgcTgcG36B.1.360.000438
ORF1ab/nsp14A2-B220A220AgcTgcC66P.1.70.001916
ORF1ab/nsp14A2-B220A220AgcTgcG35AY.1030.000019
ORF1ab/nsp14A2-B220A220AgcTgcC25AY.1030.000012
ORF1ab/nsp14A2-B220A220AgcTgcC45B.1.1600.000125
ORF1ab/nsp14A2-B220A220AgcTgcA15B.1.1600.000031
ORF1ab/nsp14A2-B220A220AgcTgcC55B.1.5090.004329
ORF1ab/nsp14A2-B220A220AgcTgcC44B.1.2210.000284
ORF1ab/nsp14A2-B220A220AgcTgcC23AY.30.00002
ORF1ab/nsp14A2-B220A220AgcTgcG13AY.30.00001
ORF1ab/nsp14A2-B220A220AgcTgcG33AY.60.000123
ORF1ab/nsp14A2-B220A220AgcTgcC33B.1.621.10.001517
ORF1ab/nsp14A2-B220A220AgcTgcG33P.10.000047
ORF1ab/nsp14A2-B220A220AgcTgcC22A0.000774
ORF1ab/nsp14A2-B220A220AgcTgcC22AY.1180.000125
ORF1ab/nsp14A2-B220A220AgcTgcC22AY.200.000078
ORF1ab/nsp14A2-B220A220AgcTgcA22AY.290.000032
ORF1ab/nsp14A2-B220A220AgcTgcC22AY.460.000208
ORF1ab/nsp14A2-B220A220AgcTgcC22AY.50.000041
ORF1ab/nsp14A2-B220A220AgcTgcC22AY.630.000774
ORF1ab/nsp14A2-B220A220AgcTgcC22AY.690.000373
ORF1ab/nsp14A2-B220A220AgcTgcC22B.10.000018
ORF1ab/nsp14A2-B220A220AgcTgcG12B.1.10.000018
ORF1ab/nsp14A2-B220A220AgcTgcC12B.1.10.000018
ORF1ab/nsp14A2-B220A220AgcTgcG22B.1.1.2630.003115
ORF1ab/nsp14A2-B220A220AgcTgcC22B.1.1770.000026
ORF1ab/nsp14A2-B220A220AgcTgcC22B.1.177.40.000422
ORF1ab/nsp14A2-B220A220AgcTgcC12B.1.3510.00003
ORF1ab/nsp14A2-B220A220AgcTgcG12B.1.3510.00003
ORF1ab/nsp14A2-B220A220AgcTgcA22B.1.6370.000146
ORF1ab/nsp14A2-B220A220AgcTgcC22P.20.000373
ORF1ab/nsp14A2-B220A220AgcTgcA11AY.1020.000027
ORF1ab/nsp14A2-B220A220AgcTgcC11AY.1060.000335
ORF1ab/nsp14A2-B220A220AgcTgcA11AY.1160.000287
ORF1ab/nsp14A2-B220A220AgcTgcG11AY.1200.000037
ORF1ab/nsp14A2-B220A220AgcTgcG11AY.16.10.00047
ORF1ab/nsp14A2-B220A220AgcTgcG11AY.350.000233
ORF1ab/nsp14A2-B220A220AgcTgcC11AY.4.30.000842
ORF1ab/nsp14A2-B220A220AgcTgcC11AY.46.60.000072
ORF1ab/nsp14A2-B220A220AgcTgcC11AY.530.000288
ORF1ab/nsp14A2-B220A220AgcTgcC11AY.90.000068
ORF1ab/nsp14A2-B220A220AgcTgcG11AY.98.10.000048
ORF1ab/nsp14A2-B220A220AgcTgcG11B0.000128
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.1.2840.000107
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.1.2900.018182
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.1.5120.028571
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp14A2-B220A220AgcTgcA11B.1.177.590.016129
ORF1ab/nsp14A2-B220A220AgcTgcG11B.1.177.730.000566
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.214.20.0006
ORF1ab/nsp14A2-B220A220AgcTgcA11B.1.2340.000132
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.258.110.000396
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.36.180.00042
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.3910.001127
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.4290.000024
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.5210.004975
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.5250.000113
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.5260.000024
ORF1ab/nsp14A2-B220A220AgcTgcA11B.1.5950.000261
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.5960.000087
ORF1ab/nsp14A2-B220A220AgcTgcC11B.1.6210.000089
ORF1ab/nsp14A2-B220A220AgcTgcC11B.30.000831
ORF1ab/nsp14A2-B220A220AgcTgcC11D.20.000075
ORF1ab/nsp14A2-B220A220AgcTgcG11P.1.140.000048
ORF1ab/nsp14A2-B220A220AgcTgcC11Q.80.000165