CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : Mut = A119del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B119A119del1A6044del1delGct-ct640.66666718394-18396
ORF1ab/nsp14A2-B119A119del1A6044del1delgCtg-t610.16666718394-18396
ORF1ab/nsp14A2-B119A119del1A6044del1delgcTgc-610.16666718394-18396

Details of the mutation A119del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B119A119del1Gct-ct46All0.000001
ORF1ab/nsp14A2-B119A119del1gCtg-t16All0
ORF1ab/nsp14A2-B119A119del1gcTgc-16All0
ORF1ab/nsp14A2-B119A119del1Gct-ct11AY.250.000006
ORF1ab/nsp14A2-B119A119del1gcTgc-11AY.40.000002
ORF1ab/nsp14A2-B119A119del1Gct-ct11B.1.10.000018
ORF1ab/nsp14A2-B119A119del1Gct-ct11B.1.2470.014925
ORF1ab/nsp14A2-B119A119del1Gct-ct11B.1.36.80.001
ORF1ab/nsp14A2-B119A119del1gCtg-t11B.1.617.20.000004