CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 92 & Codon = ga-

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B92E92del1E6017del1delgaGga-1391380.99280618313-18315

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B92E92del1gaGga-138139All0.000026
ORF1ab/nsp14A2-B92E92del1gaGga-3737B.1.20.000326
ORF1ab/nsp14A2-B92E92del1gaGga-1919AY.440.000116
ORF1ab/nsp14A2-B92E92del1gaGga-1616AY.120.10.005136
ORF1ab/nsp14A2-B92E92del1gaGga-1212AY.1030.000075
ORF1ab/nsp14A2-B92E92del1gaGga-66B.1.617.20.000023
ORF1ab/nsp14A2-B92E92del1gaGga-55P.10.000079
ORF1ab/nsp14A2-B92E92del1gaGga-440.222222
ORF1ab/nsp14A2-B92E92del1gaGga-44B.1.1.70.000004
ORF1ab/nsp14A2-B92E92del1gaGga-33AY.30.00003
ORF1ab/nsp14A2-B92E92del1gaGga-33AY.470.000093
ORF1ab/nsp14A2-B92E92del1gaGga-33B.1.2340.000396
ORF1ab/nsp14A2-B92E92del1gaGga-22AY.140.000176
ORF1ab/nsp14A2-B92E92del1gaGga-22AY.200.000078
ORF1ab/nsp14A2-B92E92del1gaGga-22AY.250.000012
ORF1ab/nsp14A2-B92E92del1gaGga-22AY.260.000057
ORF1ab/nsp14A2-B92E92del1gaGga-22AY.540.000191
ORF1ab/nsp14A2-B92E92del1gaGga-22AY.620.000871
ORF1ab/nsp14A2-B92E92del1gaGga-11AY.1130.000142
ORF1ab/nsp14A2-B92E92del1gaGga-11AY.1190.000035
ORF1ab/nsp14A2-B92E92del1gaGga-11AY.40.000002
ORF1ab/nsp14A2-B92E92del1gaGga-11AY.430.000004
ORF1ab/nsp14A2-B92E92del1gaGga-11AY.820.001357
ORF1ab/nsp14A2-B92E92del1gaGga-11AY.950.000761
ORF1ab/nsp14A2-B92E92del1gaGga-11B.1.110.30.000718
ORF1ab/nsp14A2-B92E92del1gaGga-11B.1.177.690.001484
ORF1ab/nsp14A2-B92E92del1gaGga-11B.1.3240.001605
ORF1ab/nsp14A2-B92E92del1gaGga-11B.1.3770.004566
ORF1ab/nsp14A2-B92E92del1gaGga-11B.1.4260.001009
ORF1ab/nsp14A2-B92E92del1gaGga-11B.1.5260.000024
ORF1ab/nsp14A2-B92E92del1gaGga-11P.1.120.000484
ORF1ab/nsp14A2-B92E92del1gaGga-11P.1.140.000048